6R0C: Human-D02 Nucleosome Core Particle with biotin-streptavidin label

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PDB ID: 6R0CDownload
MMDB ID: 179894
PDB Deposition Date: 2019/3/12
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 4.2  Å
Source Organism:
Similar Structures:
Biological Unit for 6R0C: decameric; determined by author and by software (PISA)
Molecular Graphic ?
6R0C: Human-D02 Nucleosome Core Particle with biotin-streptavidin label
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Interactions?
AA: Histone H3.3BB: Histone H4CC: Histone H2A type 1DD: Histone H2B type 1-C/E/F/G/IEE: Histone H3.3FF: Histone H4GG: Histone H2A type 1HH: Histone H2B type 1-C/E/F/G/III: DNA (142-MER)JJ: DNA (142-MER)1MN: MANGANESE (II) ION
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Data Set:
Molecular Components in 6R0C
Label Count Molecule
Proteins (8 molecules)
2
Histone H3.3
(Gene symbol: H3-3A)
2 Proteins
SS Diagram
3D Domains
1255075100125136136 residues, click to see VAST similar structures.helix 46-57helix 66-79helix 87-115helix 123-132Domain 1 (62-136): click to see VAST similar structures1
2
Histone H4
(Gene symbol: H4C9)
2 Proteins
SS Diagram
1255075103103 residues, click to see VAST similar structures.helix 32-42helix 52-77helix 85-94
2
Histone H2A Type 1
(Gene symbol: H2AC13)
2 Proteins
SS Diagram
1255075100130130 residues, click to see VAST similar structures.helix 28-37helix 48-74helix 81-91
2
Histone H2B Type 1-c/e/f/g/i
(Gene symbol: H2BC5)
2 Proteins
SS Diagram
1255075100126126 residues, click to see VAST similar structures.helix 39-49helix 57-83helix 93-102helix 105-124
Nucleotides(2 molecules)
1
DNA (142-mer)
1255075100125145
1
DNA (142-mer)
1255075100125145
Chemical and Non-standard biopolymers (1 molecule)
1
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