6RTI: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with aptamer A9g

PDB ID: 6RTIDownload
MMDB ID: 188732
PDB Deposition Date: 2019/5/24
Updated in MMDB: 2020/06
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6RTI: tetrameric; determined by author and by software (PISA)
Molecular Components in 6RTI
Label Count Molecule
Proteins (2 molecules)
2
Glutamate Carboxypeptidase 2
Molecule annotation
Nucleotides(2 molecules)
2
Aptamer A9g, RNA (43-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (51 molecules)
1
22
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
4
beta-D-mannopyranosebeta-D-mannopyranose
3
1
alpha-D-mannopyranosealpha-D-mannopyranose
4
4
ZINC IONZINC ION
5
2
CHLORIDE IONCHLORIDE ION
6
2
CALCIUM IONCALCIUM ION
7
2
(2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID(2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID
8
12
(4S)-2-METHYL-2,4-PENTANEDIOL(4S)-2-METHYL-2,4-PENTANEDIOL
9
2
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303