National Center for
Biotechnology Information

DNA in DNA opening

PDB ID:

MMDB ID:

204939

PDB Deposition Date:

2020/9/3

Updated in MMDB:

2021/07

Experimental Method:

electron microscopy

Resolution:

9.25 Å

Source Organism:

Saccharomyces cerevisiae S288C▼

Taxonomy	Molecule
Saccharomyces cerevisiae S288C	E, 2, 0, 1, 4, 6, A, 7, 5
synthetic construct	Y, W

Similar Structures:

Biological Unit for 7K04: undecameric; determined by author

Molecular Components in 7K04
Label	Count	Molecule
Proteins (9 molecules)
E	1	DNA Repair Protein Rad33
2	1	General Transcription and DNA Repair Factor IIH Subunit Tfb2
0	1	DNA Repair Helicase Rad3
1	1	General Transcription and DNA Repair Factor IIH Subunit Tfb1
4	1	General Transcription and DNA Repair Factor IIH Subunit Tfb4
6	1	General Transcription and DNA Repair Factor IIH Subunit Ssl1
A	1	DNA Repair Protein Rad4
7	1	DNA Repair Helicase Rad25
5	1	RNA Polymerase II Transcription Factor B Subunit 5
Nucleotides(2 molecules)
Y	1	Damaged DNA Strand
W	1	Undamaged DNA Strand
Chemicals and Non-standard biopolymers (8 molecules)
1	2	CALCIUM ION
2	1	IRON/SULFUR CLUSTER
3	5	ZINC ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB