8BPA: Cryo-EM structure of the human SIN3B histone deacetylase complex at 3.7 Angstrom

PDB ID: 8BPADownload
MMDB ID: 229990
PDB Deposition Date: 2022/11/16
Updated in MMDB: 2023/05
Experimental Method:
electron microscopy
Resolution: 3.7  Å
Source Organism:
Similar Structures:
Biological Unit for 8BPA: tetrameric; determined by author
Molecular Components in 8BPA
Label Count Molecule
Proteins (4 molecules)
1
Isoform 2 of Paired Amphipathic Helix Protein Sin3b
(Gene symbol: SIN3B)
Molecule annotation
1
Histone Deacetylase 2
(Gene symbol: HDAC2)
Molecule annotation
1
PHD Finger Protein 12
(Gene symbol: PHF12)
Molecule annotation
1
Mortality Factor 4-like Protein 1
(Gene symbol: MORF4L1)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
5
ZINC IONZINC ION
2
2
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303