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Taxonomy browser (Afipia)

Afipia

Taxonomy ID: 1033 (for references in articles please use NCBI:txid1033)
current name
Afipia Brenner et al. 1992 in [Validation List No. 41 (1992)]
homotypic synonym:
"Afipia" Brenner et al. 1991, effective name 1) in [Brenner DJ et al. (1991)]
homotypic synonym:
Afipia Brenner et al. 1992 emend. La Scola et al. 2002, emended name 2) in [La Scola B et al. (2002)]
NCBI BLAST name: a-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Oligotropha Meyer et al. 1994 in [Validation List No. 48 (1994)]
homotypic synonym:
"Oligotropha" Meyer et al. 1993 in [Meyer O et al. (1993)]
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 3,045 -
Protein 167,296 3,014
Structure 7 -
Popset 112 110
PubMed Central 771 761
Gene 20,389 -
SRA Experiments 43 2
Protein Clusters 5,831 2,026
Identical Protein Groups 174,465 3,014
BioProject 45 2
BioSample 132 4
Datasets Genome 76 -
PubChem BioAssay 1 -
Taxonomy 182 1

Notes:

Comments and References:
Validation List No. 41 (1992)
VALIDATION LIST No. 41. Int. J. Syst. Bacteriol. (1992) 42(2):327-328.
Brenner DJ et al. (1991), doi: 10.1128/jcm.29.11.2450-2460.1991, PubMed: abstract
Brenner, D.J., Hollis, D.G., Moss, C.W., English, C.K., Hall, G.S., Vincent, J., Radosevic, J., Birkness, K.A., Bibb, W.F., Quinn, F.D., Swaminathan, B., Weaver, R.E., Reeves, M.W., O'Connor, S.P., Hayes, P.S., Tenover, F.C., Steigerwalt, A.G., Perkins, B.A., Daneshvar, M.I., Hill, B.C., Washington, J.A., Woods, T.C., Hunter, S.B., Hadfield, T.L., Ajello, G.W., Kaufmann, A.F., Wear, D.J., and Wenger, J.D. "Proposal of Afipia gen. nov., with Afipia felis sp. nov. (formerly the cat scratch disease bacillus), Afipia clevelandensis sp. nov. (formerly the Cleveland Clinic Foundation strain), Afipia broomeae sp. nov., and three unnamed genospecies." J. Clin. Microbiol. (1991) 29(11):2450-2460.
La Scola B et al. (2002), PubMed: abstract
La Scola, B., Mallet, M.N., Grimont, P.A.D., and Raoult, D. "Description of Afipia birgiae sp. nov. and Afipia massiliensis sp. nov. and recognition of Afipia felis genospecies A." Int. J. Syst. Evol. Microbiol. (2002) 52(5):1773-1782.
Validation List No. 48 (1994)
VALIDATION LIST No. 48. Int. J. Syst. Bacteriol. (1994) 44(1):182-183.
Meyer O et al. (1993)
Meyer, O., Stackebrandt, E., and Auling, G. "Reclassification of ubiquinone Q-10 containing carbooxidotrophic bacteria: transfer of "[Pseudomonas] carboxydovorans" OM5 to Oligotropha, gen. nov., as Oligotropha carboxidovorans, comb. nov., transfer of "[Alcaligenes] carboxydus" DSM 1086 to Carbophilus, gen. nov., as Carbophilus carboxidus, comb. nov., transfer of "[Pseudomonas] compransoris" DSM 1231 to Zavarzinia, gen. nov., as Zavarzinia compransoris, comb. nov., amended description of the new genera." Syst. Appl. Microbiol. (1993) 16(3):390-395.
Afipia (LPSN link)
Oligotropha (LPSN link)

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Afipia taxonomy/phylogenetic Encyclopedia of life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2828797260: Alfipia sp. DeMMO1_5 organism-specific Integrated Microbial Genomes
Afipia taxonomy/phylogenetic Lifemap
LBSN taxonomy/phylogenetic List of Bacterial names with Standing in Nomenclature
Afipia Brenner, Hollis, Moss, English, Hall, Vincent, Radosevic, Birkness, Bibb, Quinn, Swaminathan, Weaver, Reeves, O'Connor, Hayes, Tenover, Steigerwalt, Perkins, Daneshvar, Hill, Washington, Woods, Hunter, Hadfield, Ajello, Kaufmann, Wear & Wenger, 1992 taxonomy/phylogenetic Ocean Biogeographic Information System
Afipia | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Afipia Brenner, Hollis, Moss, English, Hall, Vincent, Radosevic, Birkness, Bibb, Quinn, Swaminathan, Weaver, Reeves, O'Connor, Hayes, Tenover, Steigerwalt, Perkins, Daneshvar, Hill, Washington, Woods, Hunter, Hadfield, Ajello, Kaufmann, Wear & Wenger, 1992 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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