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Taxonomy browser (Halalkalibacterium ligniniphilum)

Halalkalibacterium ligniniphilum

Taxonomy ID: 1134413 (for references in articles please use NCBI:txid1134413)
current name
Halalkalibacterium ligniniphilum (Zhu et al. 2014) Joshi et al. 2022 in [Validation List No. 203 (2022)]
homotypic synonym:
"Halalkalibacterium ligniniphilum" (Zhu et al. 2014) Joshi et al. 2021 in [Joshi A et al. (2021)]
basionym:
Bacillus ligniniphilus Zhu et al. 2014
type strain of Bacillus ligniniphilus: personal::L1, DSM:26145, JCM:18543
homotypic synonym:
Alkalihalobacillus ligniniphilus (Zhu et al. 2014) Patel and Gupta 2020 in [Patel S & Gupta RS (2020)]
includes:
Bacillus sp. L1(2012)
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae; Halalkalibacterium (ex Joshi et al. 2022)
   Entrez records   
Database name Direct links Links from type
Nucleotide 397 396
Protein 3,718 -
PubMed Central 32 -
Protein Clusters 2,533 -
Identical Protein Groups 3,726 -
BioProject 2 -
BioSample 1 1
Datasets Genome 1 -
Taxonomy 1 -

Comments and References:
Validation List No. 203 (2022), PubMed: abstract
Validation List No. 203. "Valid publication of new names and new combinations effectively published outside the IJSEM. Validation List no. 203." Int. J. Syst. Evol. Microbiol. (2022) 72(1):005167.
Joshi A et al. (2021), doi: 10.3389/fmicb.2021.722369, PubMed: abstract
Joshi, A., Thite, S., Karodi, P., Joseph, N., and Lodha, T. "Alkalihalobacterium elongatum gen. nov. sp. nov.: An antibiotic-producing bacterium isolated from Lonar Lake and reclassification of the genus Alkalihalobacillus into seven novel genera." Front. Microbiol. (2021) 12:722369.
Patel S & Gupta RS (2020), PubMed: abstract
Patel S, Gupta RS. "A phylogenomic and comparative genomic framework for resolving the polyphyly of the genus Bacillus: Proposal for six new genera of Bacillus species, Peribacillus gen. nov., Cytobacillus gen. nov., Mesobacillus gen. nov., Neobacillus gen. nov., Metabacillus gen. nov. and Alkalihalobacillus gen. nov." Int. J. Syst. Evol. Microbiol. (2020) 70(1):406-438.
Zhu D et al. (2014)
Zhu, D., Tanabe, S.-H., Xie, C., Honda, D., Sun, J., and Ai, L. "Bacillus ligniniphilus sp. nov., an alkaliphilic and halotolerant bacterium isolated from sediments of the South China Sea." Int. J. Syst. Evol. Microbiol. (2014) 64:1712-1717.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Alkalihalobacillus ligniniphilus meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0035814 organism-specific Genomes On Line Database
2551306660: Halalkalibacterium ligniniphilum L1 organism-specific Integrated Microbial Genomes
Bacillus ligniniphilus taxonomy/phylogenetic Lifemap
Halalkalibacterium ligniniphilum | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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