Taxonomy browser (Pimelobacter simplex)

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Taxonomy browser (Pimelobacter simplex)

Pimelobacter simplex

Taxonomy ID: 2045 (for references in articles please use NCBI:txid2045)

current name

Pimelobacter simplex (Jensen 1934) Suzuki and Komagata 1983

type strain of Pimelobacter simplex: AJ:1420, ATCC :6946, CCUG :23611, CIP:82.106, DSM :20130, HAMBI:1861, HAMBI:90, IAM:1660, IFO :12069, JCM :1363, BCCM/LMG :16261, NBRC :12069, VKM:Ac:1118, KCTC :9106, NCIMB:8929

homotypic synonym:

"Corynebacterium simplex" Jensen 1934, effective name¹⁾

Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983 emend. Nouioui et al. 2018, emended name²⁾ in [Nouioui I et al. (2018c)]

Arthrobacter simplex (Jensen 1934) Lochhead 1957 (Approved Lists 1980), nom. approb.³⁾ in [Skerman VBD et al. (1980)]

Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Propionibacteriales; Nocardioidaceae; Pimelobacter

Entrez records
Database name	Direct links	Links from type
Nucleotide	899	118
Protein	64,510	-
Structure	2	-
Genome	1	-
Popset	7	-
GEO Datasets	12	-
PubMed Central	173	-
SRA Experiments	44	-
Protein Clusters	1	-
Identical Protein Groups	30,447	-
BioProject	17	-
BioSample	28	2
Assembly	10	-
PubChem BioAssay	5	-
Taxonomy	1	-

Notes:

1) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
3) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.

Jensen HL (1934)

Jensen, H.L. "Studies on saprophytic mycobactera and corynebacteria." Proc. Linnean Soc. New South Wales (1934) 59:19-61. [No PubMed record available.]

Lochhead AG (1957)

Lochhead, A.G. "Genus VI. Arthrobacter." In: R.S. Breed, E.G.D. Murray, and N.R. Smith (eds), Bergey's Manual of Determinative Bacteriology, seventh edition, The Williams & Wilkins Co, Baltimore, (1957). pp. 605-612. [No PubMed record available.]

O'Donnell AG et al. (1982)

O'Donnell, A.G., Goodfellow, M., and Minnikin, D.E. "Lipids in the classification of Nocardioides: reclassification of Arthrobacter simplex (Jensen) Lochhead in the genus Nocardioides (Prauser) emend. O'Donnell et al. as Nocardioides simplex comb. nov." Arch. Microbiol. (1982) 133:323-329.

Suzuki K & Komagata K (1983)

Suzuki, K., and Komagata, K. "Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall." J. Gen. Appl. Microbiol. (1983) 29:59-71. [No PubMed record available.]

VALIDATION LIST No. 11 (1983) (Pimelobacter simplex)

VALIDATION LIST No. 11. Int. J. Syst. Bacteriol. (1983) 33:672-674.

VALIDATION LIST No. 12 (1983) (Nocardioides simplex)

VALIDATION LIST No. 12. Int. J. Syst. Bacteriol. (1983) 33:896-897.

Yoon JH et al. (1997)

Yoon, J.H., Lee, J.S., Shin, Y.K., Park, Y.H., and Lee, S.T. "Reclassification of Nocardioides simplex ATCC 13260, ATCC 19565, and ATCC 19566 as Rhodococcus erythropolis." Int. J. Syst. Bacteriol. (1997) 47:904-907.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Nocardioides simplex	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 2 Organisms	organism-specific	Genomes On Line Database
Pimelobacter simplex	culture/stock collections	Global Catalogue of Microorganisms
2 records from this provider	organism-specific	Integrated Microbial Genomes
Corynebacterium simplex	taxonomy/phylogenetic	Integrated Taxonomic Information System
OMA	taxonomy/phylogenetic	OMA Browser: Orthologous MAtrix
Pimelobacter simplex \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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