Taxonomy browser (Tsukamurella pulmonis)

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Taxonomy browser (Tsukamurella pulmonis)

Tsukamurella pulmonis

Taxonomy ID: 47312 (for references in articles please use NCBI:txid47312)

current name

Tsukamurella pulmonis Yassin et al. 1996 in [Yassin AF et al. (1996)]

type strain of Tsukamurella pulmonis: ATCC :700081, CCUG :35732, CIP:104791, DSM :44142, IMMIB:D:1321, JCM :10111, NCTC:13230

homotypic synonym:

Tsukamurella pulmonis Yassin et al. 1996 emend. Teng et al. 2016, emended name¹⁾ in [Teng JL et al. (2016)]

includes:

Tsukamurella sp. K362

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Tsukamurella spongiae Olson et al. 2007 in [Olson JB et al. (2007)]

type strain of Tsukamurella spongiae: DSM :44990, JCM :14882, NRRL :B-24467, personal::K362

homotypic synonym:

Tsukamurella spongiae Olson et al. 2007 emend. Nouioui et al. 2018, emended name²⁾ in [Nouioui I et al. (2018c)]

Lineage( full ): cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Tsukamurellaceae; Tsukamurella

Entrez records
Database name	Direct links	Links from type
Nucleotide	881	143
Protein	38,377	-
Popset	25	-
PubMed Central	96	-
SRA Experiments	13	-
Identical Protein Groups	14,968	-
BioProject	10	-
BioSample	13	6
Datasets Genome	6	-
PubChem BioAssay	1	-
Taxonomy	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Yassin AF et al. (1996), PubMed: abstract

Yassin, A.F., Rainey, F.A., Brzezinka, H., Burghardt, J., Rifai, M., Seifert, P., Feldmann, K., and Schaal, K.P. "Tsukamurella pulmonis sp. nov." Int. J. Syst. Bacteriol. (1996) 46(2):429-436.

Teng JL et al. (2016), doi: 10.3389/fmicb.2016.01137, PubMed: abstract

Teng, J.L.L., Tang, Y., Huang, Y., Guo, F.-B., Wei, W., Chen, J.H.K., Wong, S.S.Y., Lau, S.K.P., and Woo, P.C.Y. "Phylogenomic analyses and reclassification of species within the genus Tsukamurella: insights to species definition in the post-genomic era." Front. Microbiol. (2016) 7:1137.

Olson JB et al. (2007), PubMed: abstract

Olson, J.B., Harmody, D.K., Bej, A.K., and McCarthy, P.J. "Tsukamurella spongiae sp. nov., a novel actinomycete isolated from a deep-water marine sponge." Int. J. Syst. Evol. Microbiol. (2007) 57(7):1478-1481.

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

List of Changes in Taxonomic Opinion No. 25 (2017)

"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67:7-8.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Tsukamurella pulmonis	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Tsukamurella pulmonis Yassin et al. 1996	taxonomy/phylogenetic	Encyclopedia of life
GOLD: 6 Organisms	organism-specific	Genomes On Line Database
Tsukamurella pulmonis	culture/stock collections	Global Catalogue of Microorganisms
5 records from this provider	organism-specific	Integrated Microbial Genomes
Tsukamurella spongiae Olson, Harmody, Bej & McCarthy, 2007	taxonomy/phylogenetic	Ocean Biogeographic Information System
Tsukamurella pulmonis \| SeqCode Registry	taxonomy/phylogenetic	SeqCode Registry
Tsukamurella spongiae Olson, Harmody, Bej & McCarthy, 2007	taxonomy/phylogenetic	World Register of Marine Species

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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