U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA1003508 ID: 1003508

Oxygen Minimum Zone Metagenome

Nitrite oxidizing bacteria in oxygen minimum zones

Novel nitrite oxidizing bacteria isolated from oxygen minimum zone metagenomes
AccessionPRJNA1003508
Data TypeGenome sequencing
ScopeEnvironment
Organismseawater metagenome[Taxonomy ID: 1561972]
unclassified sequences; metagenomes; ecological metagenomes; seawater metagenome
Publications
  • Published online: Fortin S et al., "Nitrite-oxidizing bacteria adapted to low-oxygen conditions dominate nitrite oxidation in marine oxygen minimum zones", The ISME Journal, 2024;18(1)
Grants
  • "NA" (Grant ID 675459, Simons Foundation)
  • "Mechanisms and Controls of Nitrous Oxide Production in the Eastern Tropical North Pacific Ocean" (Grant ID 1657663, National Science Foundation)
  • "Nitrite Oxidation in Oxygen Minimum Zones" (Grant ID 1946516, National Science Foundation)
SubmissionRegistration date: 28-Aug-2023
Princeton University
Related Resources
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)31
SRA Experiments27
Other datasets
BioSample58
Assembly31
Assembly details:
Assembly levelNumber of Assemblies
31
31
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_030921555.1ContigJAVEOG000000000SAMN36982681
ODZ_NOB1d
GCA_030922155.1ContigJAVEOR000000000SAMN36982692
ODZ_NOB3a
GCA_030922025.1ContigJAVEOP000000000SAMN36982690
ODZ_NOB2d
GCA_030922055.1ContigJAVEON000000000SAMN36982688
ODZ_NOB2b
GCA_030922015.1ContigJAVEOO000000000SAMN36982689
ODZ_NOB2c
GCA_030921975.1ContigJAVEOQ000000000SAMN36982691
ODZ_NOB2e
GCA_030921915.1ContigJAVEOM000000000SAMN36982687
ODZ_NOB2a
GCA_030921855.1ContigJAVEOL000000000SAMN36982686
ODZ_NOB1i
GCA_030921795.1ContigJAVEOJ000000000SAMN36982684
ODZ_NOB1g
GCA_030921805.1ContigJAVEOD000000000SAMN36982678
ODZ_NOB1a
GCA_030921755.1ContigJAVEOK000000000SAMN36982685
ODZ_NOB1h
GCA_030921695.1ContigJAVEOE000000000SAMN36982679
ODZ_NOB1b
GCA_030921575.1ContigJAVEOH000000000SAMN36982682
ODZ_NOB1e
GCA_030922285.1ContigJAVEOU000000000SAMN36982695
ODZ_NOB3d
GCA_030922275.1ContigJAVEOT000000000SAMN36982694
ODZ_NOB3c
GCA_030922215.1ContigJAVEOS000000000SAMN36982693
ODZ_NOB3b
GCA_030931135.1ContigJAVEOF000000000SAMN36982680
ODZ_NOB1c
GCA_030921565.1ContigJAVEOI000000000SAMN36982683
ODZ_NOB1f
GCA_030922245.1ContigJAVEOV000000000SAMN36982696
ODZ_NOB4a
GCA_030922385.1ContigJAVEOZ000000000SAMN36982700
ODZ_NOB6a
GCA_030922355.1ContigJAVEOY000000000SAMN36982699
ODZ_NOB5b
GCA_030922335.1ContigJAVEOX000000000SAMN36982698
ODZ_NOB5a
GCA_030922315.1ContigJAVEOW000000000SAMN36982697
ODZ_NOB4b
GCA_030922435.1ContigJAVEPA000000000SAMN36982701
ODZ_NOB6b
GCA_030922415.1ContigJAVEPC000000000SAMN36982703
ODZ_NOB10b
GCA_030922375.1ContigJAVEPB000000000SAMN36982702
ODZ_NOB7a
GCA_030922535.1ContigJAVEPH000000000SAMN36982708
ODZ_NOB10a
GCA_030922515.1ContigJAVEPG000000000SAMN36982707
ODZ_NOB9b
GCA_030922485.1ContigJAVEPF000000000SAMN36982706
ODZ_NOB9a
GCA_030922475.1ContigJAVEPE000000000SAMN36982705
ODZ_NOB8b
GCA_030922445.1ContigJAVEPD000000000SAMN36982704
ODZ_NOB8a
SRA Data Details
ParameterValue
Data volume, Gbases494
Data volume, Tbytes0.18

Supplemental Content

Related Resources

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center