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This project collects the sequencing data and assemblies generated for Metopus sp. strain QDUM to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Ciliate-Symbiosis Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/ciliates-as-models-for-symbiosis/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB65636 |
| Type | Umbrella project |
| Organism | Metopus sp. strain QDUM[Taxonomy ID: 2980493] Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Armophorea; Metopida; Metopidae; Metopus; Metopus sp. strain QDUM |
| Submission | Registration date: 1-Sep-2023
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 198 |
| WGS master | 6 |
| Genomic DNA | 1 |
| SRA Experiments | 3 |
| Other datasets |
| BioSample | 10 |
| Assembly | 7 |
piMetSped encompasses the following 15 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Complete genome |
1
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB67570 | Complete genome | ciliate metagenome | ciliate metagenome genome assembly, piMetSped1.metagenome (WELLCOME SANGER INSTITUTE) |
|
| Other | 14 |
BioProject
accession | Organism | Title |
|---|
| PRJEB67567 | Arenicellaceae bacterium | Arenicellaceae bacterium genome assembly, piMetSped1.Arenicellaceae_1 (WELLCOME SANGER INSTITUTE) | | PRJEB67566 | Candidatus Gracilibacteria bacterium | Candidatus Gracilibacteria bacterium genome assembly, piMetSped1.Candidatus_Gracilibacteria_1 (WELLCOME SANGER INSTITUTE) | | PRJEB67569 | Granulosicoccaceae bacterium | Granulosicoccaceae bacterium genome assembly, piMetSped1.Granulosicoccaceae_1 (WELLCOME SANGER INSTITUTE) | | PRJEB67563 | Granulosicoccaceae bacterium | Granulosicoccaceae bacterium genome assembly, piMetSped1.Granulosicoccaceae_2 (WELLCOME SANGER INSTITUTE) | | PRJEB67568 | Maricaulaceae bacterium | Maricaulaceae bacterium genome assembly, piMetSped1.Maricaulaceae_1 (WELLCOME SANGER INSTITUTE) | | PRJEB68836 | Mariniblastus sp. | Mariniblastus sp. genome assembly, piMetSped1.Mariniblastus_sp_1 (WELLCOME SANGER INSTITUTE) | | PRJEB65635 | Metopus sp. strain QDUM | Metopus sp. strain QDUM, genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) | | PRJEB67565 | Rhodococcus qingshengii | Rhodococcus qingshengii genome assembly, piMetSped1.Rhodococcus_qingshengii_1 (WELLCOME SANGER INSTITUTE) | | PRJEB67564 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_5 (WELLCOME SANGER INSTITUTE) | | PRJEB68806 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_4 (WELLCOME SANGER INSTITUTE) | | PRJEB68621 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_6 (WELLCOME SANGER INSTITUTE) | | PRJEB68913 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_2 (WELLCOME SANGER INSTITUTE) | | PRJEB69119 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_1 (WELLCOME SANGER INSTITUTE) | | PRJEB68898 | Saprospiraceae bacterium | Saprospiraceae bacterium genome assembly, piMetSped1.Saprospiraceae_3 (WELLCOME SANGER INSTITUTE) |
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