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Accession: PRJNA1014893 ID: 1014893

An investigation into the molecular epidemiology of Vibrio alginolyticus from China

This study aimed to gain essential information on the prevalence, phylogenetic relationships, antimicrobial resistance, and distribution of antibiotic resistance genes among Vibrio alginolyticus strains isolated in China.
AccessionPRJNA1014893
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 10-Sep-2023
The Hong Kong Polytechnic University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)175
Other datasets
BioSample175
Assembly175
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
119
56
175
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_033340555.1ScaffoldJAWOWP000000000SAMN37342241
1069
Vibrio sp. 1069
GCA_033340415.1ScaffoldJAWOWO000000000SAMN37342242
1074
Vibrio sp. 1074
GCA_033340355.1ScaffoldJAWOWN000000000SAMN37342243
1075
Vibrio sp. 1075
GCA_033340475.1ScaffoldJAWOWM000000000SAMN37342244
1078-1
Vibrio sp. 1078-1
GCA_033340395.1ScaffoldJAWOWL000000000SAMN37342245
1159
Vibrio sp. 1159
GCA_033340375.1ScaffoldJAWOWK000000000SAMN37342246
1167
Vibrio sp. 1167
GCA_033340495.1ScaffoldJAWOWJ000000000SAMN37342247
1249-1
Vibrio sp. 1249-1
GCA_033340515.1ScaffoldJAWOWI000000000SAMN37342248
1262-1
Vibrio sp. 1262-1
GCA_033340335.1ScaffoldJAWOWH000000000SAMN37342249
1287
Vibrio sp. 1287
GCA_033344475.1ScaffoldJAWPOX000000000SAMN37342250
1288
Vibrio sp. 1288
GCA_033391105.1ScaffoldJAWPOW000000000SAMN37342251
1291-1
Vibrio sp. 1291-1
GCA_033340315.1ScaffoldJAWOWG000000000SAMN37342252
1394
Vibrio sp. 1394
GCA_033340295.1ScaffoldJAWOWF000000000SAMN37342253
1401
Vibrio sp. 1401
GCA_033340275.1ScaffoldJAWOWE000000000SAMN37342254
1402
Vibrio sp. 1402
GCA_033344485.1ScaffoldJAWPOV000000000SAMN37342255
1403
Vibrio sp. 1403
GCA_033340235.1ScaffoldJAWOWD000000000SAMN37342256
1404
Vibrio sp. 1404
GCA_033344455.1ScaffoldJAWPOU000000000SAMN37342257
1408
Vibrio sp. 1408
GCA_033340255.1ScaffoldJAWOWC000000000SAMN37342258
1409
Vibrio sp. 1409
GCA_033340215.1ScaffoldJAWOWB000000000SAMN37342259
1456-1
Vibrio sp. 1456-1
GCA_033340195.1ScaffoldJAWOWA000000000SAMN37342260
1457
Vibrio sp. 1457
GCA_033340175.1ScaffoldJAWOVZ000000000SAMN37342261
1557
Vibrio sp. 1557
GCA_033340155.1ScaffoldJAWOVY000000000SAMN37342262
1562
Vibrio sp. 1562
GCA_033340115.1ScaffoldJAWOVX000000000SAMN37342263
1565-1
Vibrio sp. 1565-1
GCA_033340095.1ScaffoldJAWOVW000000000SAMN37342264
1567
Vibrio sp. 1567
GCA_033340135.1ScaffoldJAWOVV000000000SAMN37342265
1569
Vibrio sp. 1569
GCA_033340075.1ScaffoldJAWOVU000000000SAMN37342266
1579
Vibrio sp. 1579
GCA_033340055.1ScaffoldJAWOVT000000000SAMN37342267
1580
Vibrio sp. 1580
GCA_033340035.1ScaffoldJAWOVS000000000SAMN37342268
1636
Vibrio sp. 1636
GCA_033340015.1ScaffoldJAWOVR000000000SAMN37342269
1637
Vibrio sp. 1637
GCA_033339975.1ScaffoldJAWOVQ000000000SAMN37342270
1640
Vibrio sp. 1640
GCA_033339995.1ScaffoldJAWOVP000000000SAMN37342271
1641
Vibrio sp. 1641
GCA_033344415.1ScaffoldJAWPOT000000000SAMN37342272
1727
Vibrio sp. 1727
GCA_033339955.1ScaffoldJAWOVO000000000SAMN37342273
1731
Vibrio sp. 1731
GCA_033339875.1ScaffoldJAWOVN000000000SAMN37342274
1733
Vibrio sp. 1733
GCA_033339895.1ScaffoldJAWOVM000000000SAMN37342275
1751
Vibrio sp. 1751
GCA_033339915.1ScaffoldJAWOVL000000000SAMN37342276
1761
Vibrio sp. 1761
GCA_033339935.1ScaffoldJAWOVK000000000SAMN37342277
1762
Vibrio sp. 1762
GCA_033339855.1ScaffoldJAWOVJ000000000SAMN37342278
1833
Vibrio sp. 1833
GCA_033339815.1ScaffoldJAWOVI000000000SAMN37342279
1863
Vibrio sp. 1863
GCA_033344425.1ScaffoldJAWPOS000000000SAMN37342280
1865
Vibrio sp. 1865
GCA_033339825.1ScaffoldJAWOVH000000000SAMN37342281
1866
Vibrio sp. 1866
GCA_033344395.1ScaffoldJAWPOR000000000SAMN37342282
1874
Vibrio sp. 1874
GCA_033339775.1ScaffoldJAWOVG000000000SAMN37342283
1942
Vibrio sp. 1942
GCA_033344355.1ScaffoldJAWPOQ000000000SAMN37342284
1974
Vibrio sp. 1974
GCA_033344345.1ScaffoldJAWPOP000000000SAMN37342285
1978
Vibrio sp. 1978
GCA_033339795.1ScaffoldJAWOVF000000000SAMN37342286
1982
Vibrio sp. 1982
GCA_033339755.1ScaffoldJAWOVE000000000SAMN37342287
2025
Vibrio sp. 2025
GCA_033339715.1ScaffoldJAWOVD000000000SAMN37342288
2026
Vibrio sp. 2026
GCA_033339735.1ScaffoldJAWOVC000000000SAMN37342289
2033
Vibrio sp. 2033
GCA_033339695.1ScaffoldJAWOVB000000000SAMN37342290
2084
Vibrio sp. 2084
GCA_033339675.1ScaffoldJAWOVA000000000SAMN37342291
2089
Vibrio sp. 2089
GCA_033339655.1ScaffoldJAWOUZ000000000SAMN37342292
2091
Vibrio sp. 2091
GCA_033339635.1ScaffoldJAWOUY000000000SAMN37342293
2092
Vibrio sp. 2092
GCA_033344335.1ScaffoldJAWPOO000000000SAMN37342294
2094
Vibrio sp. 2094
GCA_033339595.1ScaffoldJAWOUX000000000SAMN37342295
2096
Vibrio sp. 2096
GCA_033339615.1ScaffoldJAWOUW000000000SAMN37342296
2099
Vibrio sp. 2099
GCA_033339575.1ScaffoldJAWOUV000000000SAMN37342297
2128
Vibrio sp. 2128(2023)
GCA_033339555.1ScaffoldJAWOUU000000000SAMN37342298
2129
Vibrio sp. 2129(2023)
GCA_033339515.1ScaffoldJAWOUT000000000SAMN37342299
2130
Vibrio sp. 2130-1
GCA_033344315.1ScaffoldJAWPON000000000SAMN37342300
2132
Vibrio sp. 2132-1
GCA_033339495.1ScaffoldJAWOUS000000000SAMN37342301
2134
Vibrio sp. 2134-1
GCA_033339525.1ScaffoldJAWOUR000000000SAMN37342302
2175
Vibrio sp. 2175-1
GCA_033339475.1ScaffoldJAWOUQ000000000SAMN37342303
2304
Vibrio sp. 2304
GCA_033339455.1ScaffoldJAWOUP000000000SAMN37342304
299
Vibrio sp. 299
GCA_033339435.1ScaffoldJAWOUO000000000SAMN37342305
378
Vibrio sp. 378
GCA_033339395.1ScaffoldJAWOUN000000000SAMN37342306
397
Vibrio sp. 397
GCA_033339415.1ScaffoldJAWOUM000000000SAMN37342307
399
Vibrio sp. 399
GCA_033339355.1ScaffoldJAWOUL000000000SAMN37342308
431
Vibrio sp. 431
GCA_033339375.1ScaffoldJAWOUK000000000SAMN37342309
506
Vibrio sp. 506
GCA_033339315.1ScaffoldJAWOUJ000000000SAMN37342310
661
Vibrio sp. 661
GCA_033339335.1ScaffoldJAWOUI000000000SAMN37342311
665
Vibrio sp. 665
GCA_033339295.1ScaffoldJAWOUH000000000SAMN37342312
704
Vibrio sp. 704
GCA_033339265.1ScaffoldJAWOUG000000000SAMN37342313
705
Vibrio sp. 705
GCA_033339255.1ScaffoldJAWOUF000000000SAMN37342314
707
Vibrio sp. 707
GCA_033339235.1ScaffoldJAWOUE000000000SAMN37342315
708
Vibrio sp. 708
GCA_033339215.1ScaffoldJAWOUD000000000SAMN37342316
736
Vibrio sp. 736
GCA_033344285.1ScaffoldJAWPOM000000000SAMN37342317
779
Vibrio sp. 779(2023)
GCA_033339175.1ScaffoldJAWOUC000000000SAMN37342318
780
Vibrio sp. 780
GCA_033339195.1ScaffoldJAWOUB000000000SAMN37342319
811
Vibrio sp. 811
GCA_033339155.1ScaffoldJAWOUA000000000SAMN37342320
812
Vibrio sp. 812(2023)
GCA_033339135.1ScaffoldJAWOTZ000000000SAMN37342321
818
Vibrio sp. 818
GCA_033339095.1ScaffoldJAWOTY000000000SAMN37342322
945
Vibrio sp. 945
GCA_033339115.1ScaffoldJAWOTX000000000SAMN37342323
947
Vibrio sp. 947
GCA_033339075.1ScaffoldJAWOTW000000000SAMN37342324
970
Vibrio sp. 970
GCA_033339055.1ScaffoldJAWOTV000000000SAMN37342325
977
Vibrio sp. 977
GCA_033339035.1ScaffoldJAWOTU000000000SAMN37342326
Vb0301
Vibrio sp. Vb0301
GCA_033338995.1ScaffoldJAWOTT000000000SAMN37342327
Vb0304
Vibrio sp. Vb0304
GCA_033338975.1ScaffoldJAWOTS000000000SAMN37342328
Vb0349
Vibrio sp. Vb0349
GCA_033339015.1ScaffoldJAWOTR000000000SAMN37342329
Vb0562
Vibrio sp. Vb0562
GCA_033338955.1ScaffoldJAWOTQ000000000SAMN37342330
Vb0587
Vibrio sp. Vb0587
GCA_033338935.1ScaffoldJAWOTP000000000SAMN37342331
Vb0598
Vibrio sp. Vb0598
GCA_033338915.1ScaffoldJAWOTO000000000SAMN37342332
Vb0599
Vibrio sp. Vb0599
GCA_033391095.1ScaffoldJAWPOL000000000SAMN37342333
Vb0667
Vibrio sp. Vb0667
GCA_033338895.1ScaffoldJAWOTN000000000SAMN37342334
Vb0718
Vibrio sp. Vb0718
GCA_033338875.1ScaffoldJAWOTM000000000SAMN37342335
Vb0839
Vibrio sp. Vb0839
GCA_033338835.1ScaffoldJAWOTL000000000SAMN37342336
Vb0888
Vibrio sp. Vb0888
GCA_033344275.1ScaffoldJAWPOK000000000SAMN37342337
Vb0932
Vibrio sp. Vb0932
GCA_033338855.1ScaffoldJAWOTK000000000SAMN37342338
Vb0937
Vibrio sp. Vb0937
GCA_033338815.1ScaffoldJAWOTJ000000000SAMN37342339
Vb0974
Vibrio sp. Vb0974
GCA_033338775.1ScaffoldJAWOTI000000000SAMN37342340
Vb1018
Vibrio sp. Vb1018
GCA_033338745.1ScaffoldJAWOTH000000000SAMN37342341
Vb1026
Vibrio sp. Vb1026
GCA_033338795.1ScaffoldJAWOTG000000000SAMN37342342
Vb1076
Vibrio sp. Vb1076
GCA_033338735.1ScaffoldJAWOTF000000000SAMN37342343
Vb1127
Vibrio sp. Vb1127
GCA_033338695.1ScaffoldJAWOTE000000000SAMN37342344
Vb1166
Vibrio sp. Vb1166
GCA_033338715.1ScaffoldJAWOTD000000000SAMN37342345
Vb1337
Vibrio sp. Vb1337
GCA_033344235.1ScaffoldJAWPOJ000000000SAMN37342346
Vb1554
Vibrio sp. Vb1554
GCA_033338675.1ScaffoldJAWOTC000000000SAMN37342347
Vb1574
Vibrio sp. Vb1574
GCA_033338655.1ScaffoldJAWOTB000000000SAMN37342348
Vb1729
Vibrio sp. Vb1729
GCA_033338635.1ScaffoldJAWOTA000000000SAMN37342349
Vb1755
Vibrio sp. Vb1755
GCA_033338615.1ScaffoldJAWOSZ000000000SAMN37342350
Vb1980
Vibrio sp. Vb1980
GCA_033338595.1ContigJAWOSY000000000SAMN37342351
Vb2110
Vibrio sp. Vb2110
GCA_033338555.1ContigJAWOSX000000000SAMN37342352
Vb2130
Vibrio sp. Vb2130
GCA_033338535.1ScaffoldJAWOSW000000000SAMN37342353
Vb2131
Vibrio sp. Vb2131
GCA_033338575.1ContigJAWOSV000000000SAMN37342354
Vb2132
Vibrio sp. Vb2132
GCA_033338515.1ContigJAWOSU000000000SAMN37342355
Vb2133
Vibrio sp. Vb2133
GCA_033338495.1ContigJAWOST000000000SAMN37342356
Vb2134
Vibrio sp. Vb2134
GCA_033338455.1ContigJAWOSS000000000SAMN37342357
Vb2135
Vibrio sp. Vb2135
GCA_033338435.1ContigJAWOSR000000000SAMN37342358
Vb2175
Vibrio sp. Vb2175
GCA_033338395.1ContigJAWOSQ000000000SAMN37342359
Vb2201
Vibrio sp. Vb2201
GCA_033338375.1ContigJAWOSP000000000SAMN37342360
Vb2227
Vibrio sp. Vb2227
GCA_033338335.1ContigJAWOSO000000000SAMN37342361
Vb2232
Vibrio sp. Vb2232
GCA_033338355.1ContigJAWOSN000000000SAMN37342362
Vb2235
Vibrio sp. Vb2235
GCA_033338315.1ContigJAWOSM000000000SAMN37342363
Vb2297
Vibrio sp. Vb2297
GCA_033338275.1ContigJAWOSL000000000SAMN37342364
Vb2321
Vibrio sp. Vb2321
GCA_033338295.1ContigJAWOSK000000000SAMN37342365
Vb2353
Vibrio sp. Vb2353
GCA_033338255.1ContigJAWOSJ000000000SAMN37342366
Vb2354
Vibrio sp. Vb2354
GCA_033338235.1ContigJAWOSI000000000SAMN37342367
Vb2356
Vibrio sp. Vb2356
GCA_033338175.1ContigJAWOSH000000000SAMN37342368
Vb2362
Vibrio sp. Vb2362
GCA_033338475.1ContigJAWOSG000000000SAMN37342369
Vb2531
Vibrio sp. Vb2531
GCA_033338415.1ContigJAWOSF000000000SAMN37342370
Vb2532
Vibrio sp. Vb2532
GCA_033338155.1ContigJAWOSE000000000SAMN37342371
Vb2535
Vibrio sp. Vb2535
GCA_033338135.1ContigJAWOSD000000000SAMN37342372
Vb2610
Vibrio sp. Vb2610
GCA_033338115.1ContigJAWOSC000000000SAMN37342373
Vb2628
Vibrio sp. Vb2628
GCA_033338095.1ContigJAWOSB000000000SAMN37342374
Vb2656
Vibrio sp. Vb2656
GCA_033338075.1ContigJAWOSA000000000SAMN37342375
Vb2657
Vibrio sp. Vb2657
GCA_033338055.1ContigJAWORZ000000000SAMN37342376
Vb2658
Vibrio sp. Vb2658
GCA_033338035.1ContigJAWORY000000000SAMN37342377
Vb2704
Vibrio sp. Vb2704
GCA_033338015.1ContigJAWORX000000000SAMN37342378
Vb2853
Vibrio sp. Vb2853
GCA_033338195.1ContigJAWORW000000000SAMN37342379
Vb2864
Vibrio sp. Vb2864
GCA_033338215.1ContigJAWORV000000000SAMN37342380
Vb2865
Vibrio sp. Vb2865
GCA_033337995.1ContigJAWORU000000000SAMN37342381
Vb2873
Vibrio sp. Vb2873
GCA_033337975.1ContigJAWORT000000000SAMN37342382
Vb2880
Vibrio sp. Vb2880
GCA_033337955.1ContigJAWORS000000000SAMN37342383
Vb2881
Vibrio sp. Vb2881
GCA_033337935.1ContigJAWORR000000000SAMN37342384
Vb2892
Vibrio sp. Vb2892
GCA_033337915.1ContigJAWORQ000000000SAMN37342385
Vb2896
Vibrio sp. Vb2896
GCA_033337895.1ContigJAWORP000000000SAMN37342386
Vb2897
Vibrio sp. Vb2897
GCA_033337875.1ContigJAWORO000000000SAMN37342387
Vb2898
Vibrio sp. Vb2898
GCA_033438955.1ContigJAWORN000000000SAMN37342388
Vb2899
Vibrio sp. Vb2899
GCA_033337845.1ContigJAWORM000000000SAMN37342389
Vb2907
Vibrio sp. Vb2907
GCA_033337805.1ContigJAWORL000000000SAMN37342390
Vb2908
Vibrio sp. Vb2908
GCA_033337825.1ContigJAWORK000000000SAMN37342391
Vb2909
Vibrio sp. Vb2909
GCA_033337785.1ContigJAWORJ000000000SAMN37342392
Vb2910
Vibrio sp. Vb2910
GCA_033337765.1ContigJAWORI000000000SAMN37342393
Vb2911
Vibrio sp. Vb2911
GCA_033337745.1ContigJAWORH000000000SAMN37342394
Vb2912
Vibrio sp. Vb2912
GCA_033337725.1ContigJAWORG000000000SAMN37342395
Vb2917
Vibrio sp. Vb2917
GCA_033337705.1ContigJAWORF000000000SAMN37342396
Vb2942
Vibrio sp. Vb2942
GCA_033337685.1ContigJAWORE000000000SAMN37342397
Vb2944
Vibrio sp. Vb2944
GCA_033337665.1ContigJAWORD000000000SAMN37342398
Vb2960
Vibrio sp. Vb2960
GCA_033337645.1ContigJAWORC000000000SAMN37342399
Vb2976
Vibrio sp. Vb2976
GCA_033337625.1ContigJAWORB000000000SAMN37342400
Vb2977
Vibrio sp. Vb2977
GCA_033438965.1ContigJAWORA000000000SAMN37342401
Vb2978
Vibrio sp. Vb2978
GCA_033337585.1ContigJAWOQZ000000000SAMN37342402
Vb2979
Vibrio sp. Vb2979
GCA_033337555.1ContigJAWOQY000000000SAMN37342403
Vb5029
Vibrio sp. Vb5029
GCA_033337535.1ContigJAWOQX000000000SAMN37342404
Vb5031
Vibrio sp. Vb5031
GCA_033337495.1ContigJAWOQW000000000SAMN37342405
Vb5032
Vibrio sp. Vb5032
GCA_033337515.1ContigJAWOQV000000000SAMN37342406
Vb5034
Vibrio sp. Vb5034
GCA_033337475.1ContigJAWOQU000000000SAMN37342407
Vb5035
Vibrio sp. Vb5035
GCA_033337435.1ScaffoldJAWOQT000000000SAMN37342408
Y159
Vibrio sp. Y159
GCA_033438945.1ScaffoldJAWOQS000000000SAMN37342409
Y176
Vibrio sp. Y176
GCA_033344225.1ScaffoldJAWPOI000000000SAMN37342410
Y184
Vibrio sp. Y184
GCA_033337445.1ScaffoldJAWOQR000000000SAMN37342411
YT-15
Vibrio sp. YT-15
GCA_033337405.1ScaffoldJAWOQQ000000000SAMN37342412
YT-16
Vibrio sp. YT-16
GCA_033337375.1ScaffoldJAWOQP000000000SAMN37342413
YT-17
Vibrio sp. YT-17
GCA_033337345.1ScaffoldJAWOQO000000000SAMN37342414
YT-18
Vibrio sp. YT-18
GCA_033337395.1ScaffoldJAWOQN000000000SAMN37342415
YT-19
Vibrio sp. YT-19(2023)

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