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Genome Information for Fragum sueziense
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This project collects the sequencing data and assemblies generated for Fragum sueziense, common name heart cockle, to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Photosymbiosis Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/photosymbiosis-across-the-eukaryotic-tree-of-life/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB67401 |
| Type | Umbrella project |
| Organism | Fragum sueziense[Taxonomy ID: 561460] Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Cardiida; Cardioidea; Cardiidae; Fraginae; Fragum; Fragum sueziense |
| Submission | Registration date: 13-Oct-2023
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 22 |
| WGS master | 2 |
| Genomic DNA | 20 |
| SRA Experiments | 4 |
| Other datasets |
| BioSample | 4 |
| Assembly | 2 |
xbFraSuez encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB70457 | Scaffolds | Fragum sueziense | Fragum sueziense (heart cockle) genome assembly, xbFraSuez1, alternate haplotype (WELLCOME SANGER INSTITUTE) | | PRJEB70456 | Chromosomes | Fragum sueziense | Fragum sueziense (heart cockle) genome assembly, xbFraSuez1 (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB67400 | Fragum sueziense | Fragum sueziense (heart cockle), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|