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Accession: PRJNA1028546 ID: 1028546

Photobacterium leiognathi subsp. mandapamensis

Strain diversity of Photobacterium mandapamensis isolated from the light organs of Siphamia tubifer

See Genome Information for Photobacterium leiognathi
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5 additional projects are related by organism.
These are whole genome assemblies of Photobacterium mandapamensis strains isolated from the light organs of the urchin cardinalfish, Siphamia tubifer
AccessionPRJNA1028546
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismPhotobacterium leiognathi subsp. mandapamensis[Taxonomy ID: 48408]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium leiognathi; Photobacterium leiognathi subsp. mandapamensis
PublicationsGould AL et al., "Strain-level diversity of symbiont communities between individuals and populations of a bioluminescent fish.", ISME J, 2023 Dec;17(12):2362-2369
Grants
  • "Investigating mechanisms of specificity in a bioluminescent vertebrate-bacteria symbiosis" (Grant ID DP5 OD026405, Office of the Director)
SubmissionRegistration date: 8-Nov-2023
California Academy of Sciences
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)72
Publications
PubMed1
PMC1
Other datasets
BioSample72
Assembly72
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Total
72
72
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_033448605.1ScaffoldJAWQGF000000000SAMN37845193
Jp.C
Photobacterium leiognathi subsp. mandapamensis
GCA_033448585.1ScaffoldJAWQGD000000000SAMN37845191
Jp.B
Photobacterium leiognathi subsp. mandapamensis
GCA_033448555.1ScaffoldJAWQGH000000000SAMN37845195
Jp.D
Photobacterium leiognathi subsp. mandapamensis
GCA_033448545.1ScaffoldJAWQGG000000000SAMN37845194
Jp.CC
Photobacterium leiognathi subsp. mandapamensis
GCA_033448525.1ScaffoldJAWQGI000000000SAMN37845196
Jp.DD
Photobacterium leiognathi subsp. mandapamensis
GCA_033448705.1ScaffoldJAWQGB000000000SAMN37845189
Jp.A
Photobacterium leiognathi subsp. mandapamensis
GCA_033448685.1ScaffoldJAWQGC000000000SAMN37845190
Jp.AA
Photobacterium leiognathi subsp. mandapamensis
GCA_033448665.1ScaffoldJAWQGS000000000SAMN37845206
Jp.L2
Photobacterium leiognathi subsp. mandapamensis
GCA_033448645.1ScaffoldJAWQGT000000000SAMN37845207
Jp.M
Photobacterium leiognathi subsp. mandapamensis
GCA_033448625.1ScaffoldJAWQGE000000000SAMN37845192
Jp.BB
Photobacterium leiognathi subsp. mandapamensis
GCA_033447015.1ScaffoldJAWQIS000000000SAMN37845258
Ph.Y
Photobacterium leiognathi subsp. mandapamensis
GCA_033446985.1ScaffoldJAWQIU000000000SAMN37845260
Ph.Z2
Photobacterium leiognathi subsp. mandapamensis
GCA_033458845.1ScaffoldJAWQHS000000000SAMN37845232
Ph.DD2
Photobacterium leiognathi subsp. mandapamensis
GCA_033458905.1ScaffoldJAWQHV000000000SAMN37845235
Ph.F
Photobacterium leiognathi subsp. mandapamensis
GCA_033448505.1ScaffoldJAWQGK000000000SAMN37845198
Jp.F
Photobacterium leiognathi subsp. mandapamensis
GCA_033448485.1ScaffoldJAWQGJ000000000SAMN37845197
Jp.E
Photobacterium leiognathi subsp. mandapamensis
GCA_033448465.1ScaffoldJAWQGL000000000SAMN37845199
Jp.G
Photobacterium leiognathi subsp. mandapamensis
GCA_033448445.1ScaffoldJAWQGM000000000SAMN37845200
Jp.H1
Photobacterium leiognathi subsp. mandapamensis
GCA_033448425.1ScaffoldJAWQGO000000000SAMN37845202
Jp.I
Photobacterium leiognathi subsp. mandapamensis
GCA_033448405.1ScaffoldJAWQGN000000000SAMN37845201
Jp.H2
Photobacterium leiognathi subsp. mandapamensis
GCA_033448385.1ScaffoldJAWQGP000000000SAMN37845203
Jp.J
Photobacterium leiognathi subsp. mandapamensis
GCA_033448345.1ScaffoldJAWQGQ000000000SAMN37845204
Jp.K
Photobacterium leiognathi subsp. mandapamensis
GCA_033448365.1ScaffoldJAWQGR000000000SAMN37845205
Jp.L1
Photobacterium leiognathi subsp. mandapamensis
GCA_033448325.1ScaffoldJAWQGU000000000SAMN37845208
Jp.N
Photobacterium leiognathi subsp. mandapamensis
GCA_033448305.1ScaffoldJAWQGV000000000SAMN37845209
Jp.O
Photobacterium leiognathi subsp. mandapamensis
GCA_033448285.1ScaffoldJAWQGW000000000SAMN37845210
Jp.P
Photobacterium leiognathi subsp. mandapamensis
GCA_033448265.1ScaffoldJAWQGX000000000SAMN37845211
Jp.Q
Photobacterium leiognathi subsp. mandapamensis
GCA_033448245.1ScaffoldJAWQGY000000000SAMN37845212
Jp.R
Photobacterium leiognathi subsp. mandapamensis
GCA_033448215.1ScaffoldJAWQGZ000000000SAMN37845213
Jp.S
Photobacterium leiognathi subsp. mandapamensis
GCA_033448205.1ScaffoldJAWQHA000000000SAMN37845214
Jp.T
Photobacterium leiognathi subsp. mandapamensis
GCA_033448185.1ScaffoldJAWQHB000000000SAMN37845215
Jp.U2a
Photobacterium leiognathi subsp. mandapamensis
GCA_033448165.1ScaffoldJAWQHC000000000SAMN37845216
Jp.U2b
Photobacterium leiognathi subsp. mandapamensis
GCA_033448145.1ScaffoldJAWQHD000000000SAMN37845217
Jp.V
Photobacterium leiognathi subsp. mandapamensis
GCA_033448125.1ScaffoldJAWQHE000000000SAMN37845218
Jp.W
Photobacterium leiognathi subsp. mandapamensis
GCA_033448105.1ScaffoldJAWQHF000000000SAMN37845219
Jp.X
Photobacterium leiognathi subsp. mandapamensis
GCA_033448085.1ScaffoldJAWQHH000000000SAMN37845221
Jp.Z
Photobacterium leiognathi subsp. mandapamensis
GCA_033448065.1ScaffoldJAWQHG000000000SAMN37845220
Jp.Y
Photobacterium leiognathi subsp. mandapamensis
GCA_033448045.1ScaffoldJAWQHI000000000SAMN37845222
Ph.A
Photobacterium leiognathi subsp. mandapamensis
GCA_033448025.1ScaffoldJAWQHJ000000000SAMN37845223
Ph.AA
Photobacterium leiognathi subsp. mandapamensis
GCA_033448005.1ScaffoldJAWQHK000000000SAMN37845224
Ph.B1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447985.1ScaffoldJAWQHL000000000SAMN37845225
Ph.HH
Photobacterium leiognathi subsp. mandapamensis
GCA_033447965.1ScaffoldJAWQHM000000000SAMN37845226
Ph.BB1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447945.1ScaffoldJAWQHN000000000SAMN37845227
Ph.BB2
Photobacterium leiognathi subsp. mandapamensis
GCA_033447925.1ScaffoldJAWQHQ000000000SAMN37845230
Ph.D
Photobacterium leiognathi subsp. mandapamensis
GCA_033447905.1ScaffoldJAWQHO000000000SAMN37845228
Ph.C
Photobacterium leiognathi subsp. mandapamensis
GCA_033447885.1ScaffoldJAWQHP000000000SAMN37845229
Ph.CC
Photobacterium leiognathi subsp. mandapamensis
GCA_033447865.1ScaffoldJAWQHR000000000SAMN37845231
Ph.DD1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447845.1ScaffoldJAWQHT000000000SAMN37845233
Ph.E
Photobacterium leiognathi subsp. mandapamensis
GCA_033447825.1ScaffoldJAWQHU000000000SAMN37845234
Ph.EE
Photobacterium leiognathi subsp. mandapamensis
GCA_033447785.1ScaffoldJAWQHW000000000SAMN37845236
Ph.FF
Photobacterium leiognathi subsp. mandapamensis
GCA_033447755.1ScaffoldJAWQHX000000000SAMN37845237
Ph.G
Photobacterium leiognathi subsp. mandapamensis
GCA_033447745.1ScaffoldJAWQHY000000000SAMN37845238
Ph.GG
Photobacterium leiognathi subsp. mandapamensis
GCA_033447705.1ScaffoldJAWQIB000000000SAMN37845241
Ph.J
Photobacterium leiognathi subsp. mandapamensis
GCA_033447695.1ScaffoldJAWQIA000000000SAMN37845240
Ph.I
Photobacterium leiognathi subsp. mandapamensis
GCA_033447685.1ScaffoldJAWQHZ000000000SAMN37845239
Ph.H
Photobacterium leiognathi subsp. mandapamensis
GCA_033447665.1ScaffoldJAWQIC000000000SAMN37845242
Ph.K
Photobacterium leiognathi subsp. mandapamensis
GCA_033447645.1ScaffoldJAWQID000000000SAMN37845243
Ph.L
Photobacterium leiognathi subsp. mandapamensis
GCA_033447615.1ScaffoldJAWQIG000000000SAMN37845246
Ph.O
Photobacterium leiognathi subsp. mandapamensis
GCA_033447605.1ScaffoldJAWQIE000000000SAMN37845244
Ph.M
Photobacterium leiognathi subsp. mandapamensis
GCA_033447585.1ScaffoldJAWQIF000000000SAMN37845245
Ph.N
Photobacterium leiognathi subsp. mandapamensis
GCA_033447565.1ScaffoldJAWQIH000000000SAMN37845247
Ph.P
Photobacterium leiognathi subsp. mandapamensis
GCA_033447545.1ScaffoldJAWQII000000000SAMN37845248
Ph.Q
Photobacterium leiognathi subsp. mandapamensis
GCA_033447485.1ScaffoldJAWQIN000000000SAMN37845253
Ph.U
Photobacterium leiognathi subsp. mandapamensis
GCA_033447495.1ScaffoldJAWQIK000000000SAMN37845250
Ph.R2
Photobacterium leiognathi subsp. mandapamensis
GCA_033447505.1ScaffoldJAWQIJ000000000SAMN37845249
Ph.R1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447465.1ScaffoldJAWQIL000000000SAMN37845251
Ph.S
Photobacterium leiognathi subsp. mandapamensis
GCA_033447445.1ScaffoldJAWQIM000000000SAMN37845252
Ph.T
Photobacterium leiognathi subsp. mandapamensis
GCA_033447415.1ScaffoldJAWQIP000000000SAMN37845255
Ph.W1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447395.1ScaffoldJAWQIR000000000SAMN37845257
Ph.X
Photobacterium leiognathi subsp. mandapamensis
GCA_033447385.1ScaffoldJAWQIO000000000SAMN37845254
Ph.V
Photobacterium leiognathi subsp. mandapamensis
GCA_033447365.1ScaffoldJAWQIT000000000SAMN37845259
Ph.Z1
Photobacterium leiognathi subsp. mandapamensis
GCA_033447345.1ScaffoldJAWQIQ000000000SAMN37845256
Ph.W2
Photobacterium leiognathi subsp. mandapamensis

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