ID 1039280 - BioProject

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Accession: PRJNA1039280 ID: 1039280

Human microbiota BASEHIT

We developed BASEHIT (Bacterial Selection to Elucidate Host-microbe Interactions in high Throughput), a high-throughput technology to screen intact microbial cells for the ability to bind human proteins displayed on the surface of yeast. More...

Accession	PRJNA1039280
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Sonnert ND et al., "A host-microbiota interactome reveals extensive transkingdom connectivity.", Nature, 2024 Apr;628(8006):171-179
Submission	Registration date: 11-Nov-2023 Yale University
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	166
SRA Experiments	610
Publications
PubMed	1
Other datasets
BioSample	779
Assembly	166

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

165
1
166

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_037784355.1	JBBLOF000000000	SAMN39542570	JONWP012	Staphylococcus capitis
GCA_037784285.1	JBBLOG000000000	SAMN39542571	JONWP013	Staphylococcus capitis
GCA_037699485.1	JBBLOJ000000000	SAMN39542574	JONWP016	Staphylococcus capitis
GCA_037699645.1	JBBLOD000000000	SAMN39542568	JONWP010	Staphylococcus capitis
GCA_037699545.1	JBBLOH000000000	SAMN39542572	JONWP014	Staphylococcus capitis
GCA_037699585.1	JBBLOE000000000	SAMN39542569	JONWP011	Staphylococcus capitis
GCA_037699705.1	JBBLNZ000000000	SAMN39542564	JONWP006	Staphylococcus capitis
GCA_037699685.1	JBBLOB000000000	SAMN39542566	JONWP008	Staphylococcus capitis
GCA_037699775.1	JBBLOC000000000	SAMN39542567	JONWP009	Staphylococcus capitis
GCA_037699905.1	JBBLNW000000000	SAMN39542561	JONWP003	Staphylococcus capitis
GCA_037699885.1	JBBLNX000000000	SAMN39542562	JONWP004	Staphylococcus capitis
GCA_037699985.1	JBBLNU000000000	SAMN39542559	JONWP001	Staphylococcus caprae
GCA_037699925.1	JBBLNV000000000	SAMN39542560	JONWP002	Staphylococcus caprae
GCA_037699165.1	JBBLOQ000000000	SAMN39542581	JONWP023	Staphylococcus caprae
GCA_037699305.1	JBBLOO000000000	SAMN39542579	JONWP021	Staphylococcus caprae
GCA_037699285.1	JBBLON000000000	SAMN39542578	JONWP020	Staphylococcus caprae
GCA_037699345.1	JBBLOM000000000	SAMN39542577	JONWP019	Staphylococcus caprae
GCA_037699225.1	JBBLOP000000000	SAMN39542580	JONWP022	Staphylococcus caprae
GCA_037695275.1	JBBLSE000000000	SAMN39542674	JONWP115	Staphylococcus caprae
GCA_037695515.1	JBBLRZ000000000	SAMN39542669	JONWP110	Staphylococcus caprae
GCA_037696955.1	JBBLQT000000000	SAMN39542636	JONWP078	Staphylococcus caprae
GCA_037697805.1	JBBLPZ000000000	SAMN39542616	JONWP058	Staphylococcus caprae
GCA_037698665.1	JBBLPB000000000	SAMN39542592	JONWP034	Staphylococcus caprae
GCA_037697725.1	JBBLQA000000000	SAMN39542617	JONWP059	Staphylococcus epidermidis
GCA_037697625.1	JBBLQD000000000	SAMN39542620	JONWP062	Staphylococcus epidermidis
GCA_037697685.1	JBBLQB000000000	SAMN39542618	JONWP060	Staphylococcus epidermidis
GCA_037697695.1	JBBLQC000000000	SAMN39542619	JONWP061	Staphylococcus epidermidis
GCA_037697355.1	JBBLQK000000000	SAMN39542627	JONWP069	Staphylococcus epidermidis
GCA_037697415.1	JBBLQI000000000	SAMN39542625	JONWP067	Staphylococcus epidermidis
GCA_037697525.1	JBBLQE000000000	SAMN39542621	JONWP063	Staphylococcus epidermidis
GCA_037697495.1	JBBLQH000000000	SAMN39542624	JONWP066	Staphylococcus epidermidis
GCA_037697475.1	JBBLQG000000000	SAMN39542623	JONWP065	Staphylococcus epidermidis
GCA_037697565.1	JBBLQF000000000	SAMN39542622	JONWP064	Staphylococcus epidermidis
GCA_037697895.1	JBBLPX000000000	SAMN39542614	JONWP056	Staphylococcus epidermidis
GCA_037697865.1	JBBLPY000000000	SAMN39542615	JONWP057	Staphylococcus epidermidis
GCA_037697845.1	JBBLPW000000000	SAMN39542613	JONWP055	Staphylococcus epidermidis
GCA_037697945.1	JBBLPV000000000	SAMN39542612	JONWP054	Staphylococcus epidermidis
GCA_037698065.1	JBBLPT000000000	SAMN39542610	JONWP052	Staphylococcus epidermidis
GCA_037698045.1	JBBLPS000000000	SAMN39542609	JONWP051	Staphylococcus epidermidis
GCA_037698145.1	JBBLPQ000000000	SAMN39542607	JONWP049	Staphylococcus epidermidis
GCA_037698115.1	JBBLPR000000000	SAMN39542608	JONWP050	Staphylococcus epidermidis
GCA_037698105.1	JBBLPU000000000	SAMN39542611	JONWP053	Staphylococcus epidermidis
GCA_037698245.1	JBBLPN000000000	SAMN39542604	JONWP046	Staphylococcus epidermidis
GCA_037698225.1	JBBLPP000000000	SAMN39542606	JONWP048	Staphylococcus epidermidis
GCA_037698405.1	JBBLPK000000000	SAMN39542601	JONWP043	Staphylococcus epidermidis
GCA_037696995.1	JBBLQS000000000	SAMN39542635	JONWP077	Staphylococcus epidermidis
GCA_037696755.1	JBBLQY000000000	SAMN39542641	JONWP083	Staphylococcus epidermidis
GCA_037696795.1	JBBLQX000000000	SAMN39542640	JONWP082	Staphylococcus epidermidis
GCA_037696875.1	JBBLQV000000000	SAMN39542638	JONWP080	Staphylococcus epidermidis
GCA_037696855.1	JBBLQW000000000	SAMN39542639	JONWP081	Staphylococcus epidermidis
GCA_037696835.1	JBBLQU000000000	SAMN39542637	JONWP079	Staphylococcus epidermidis
GCA_037697055.1	JBBLQR000000000	SAMN39542634	JONWP076	Staphylococcus epidermidis
GCA_037697035.1	JBBLQQ000000000	SAMN39542633	JONWP075	Staphylococcus epidermidis
GCA_037697115.1	JBBLQP000000000	SAMN39542632	JONWP074	Staphylococcus epidermidis
GCA_037697155.1	JBBLQO000000000	SAMN39542631	JONWP073	Staphylococcus epidermidis
GCA_037697195.1	JBBLQM000000000	SAMN39542629	JONWP071	Staphylococcus epidermidis
GCA_037697235.1	JBBLQN000000000	SAMN39542630	JONWP072	Staphylococcus epidermidis
GCA_037697275.1	JBBLQL000000000	SAMN39542628	JONWP070	Staphylococcus epidermidis
GCA_037697315.1	JBBLQJ000000000	SAMN39542626	JONWP068	Staphylococcus epidermidis
GCA_037696275.1	JBBLRL000000000	SAMN39542655	JONWP096	Staphylococcus epidermidis
GCA_037696255.1	JBBLRK000000000	SAMN39542654	JONWP095	Staphylococcus epidermidis
GCA_037696235.1	JBBLRJ000000000	SAMN39542653	JONWP094	Staphylococcus epidermidis
GCA_037696395.1	JBBLRH000000000	SAMN39542651	JONWP092	Staphylococcus epidermidis
GCA_037696595.1	JBBLRC000000000	SAMN39542645	JONWP087	Staphylococcus epidermidis
GCA_037696575.1	JBBLRD000000000	SAMN39542646	JONWP088	Staphylococcus epidermidis
GCA_037696455.1	JBBLRE000000000	SAMN39542647	JONWP089	Staphylococcus epidermidis
GCA_037696475.1	JBBLRF000000000	SAMN39542649	JONWP090	Staphylococcus epidermidis
GCA_037696435.1	JBBLRG000000000	SAMN39542650	JONWP091	Staphylococcus epidermidis
GCA_037696655.1	JBBLQZ000000000	SAMN39542642	JONWP084	Staphylococcus epidermidis
GCA_037696675.1	JBBLRA000000000	SAMN39542643	JONWP085	Staphylococcus epidermidis
GCA_037696635.1	JBBLRB000000000	SAMN39542644	JONWP086	Staphylococcus epidermidis
GCA_037695615.1	JBBLRY000000000	SAMN39542668	JONWP109	Staphylococcus epidermidis
GCA_037695655.1	JBBLRX000000000	SAMN39542667	JONWP108	Staphylococcus epidermidis
GCA_037695695.1	JBBLRW000000000	SAMN39542666	JONWP107	Staphylococcus epidermidis
GCA_037695775.1	JBBLRV000000000	SAMN39542665	JONWP106	Staphylococcus epidermidis
GCA_037695885.1	JBBLRS000000000	SAMN39542662	JONWP103	Staphylococcus epidermidis
GCA_037695865.1	JBBLRT000000000	SAMN39542663	JONWP104	Staphylococcus epidermidis
GCA_037695845.1	JBBLRU000000000	SAMN39542664	JONWP105	Staphylococcus epidermidis
GCA_037696075.1	JBBLRP000000000	SAMN39542659	JONWP100	Staphylococcus epidermidis
GCA_037696055.1	JBBLRO000000000	SAMN39542658	JONWP099	Staphylococcus epidermidis
GCA_037696035.1	JBBLRR000000000	SAMN39542661	JONWP102	Staphylococcus epidermidis
GCA_037696015.1	JBBLRQ000000000	SAMN39542660	JONWP101	Staphylococcus epidermidis
GCA_037696135.1	JBBLRN000000000	SAMN39542657	JONWP098	Staphylococcus epidermidis
GCA_037696195.1	JBBLRM000000000	SAMN39542656	JONWP097	Staphylococcus epidermidis
GCA_037696335.1	JBBLRI000000000	SAMN39542652	JONWP093	Staphylococcus epidermidis
GCA_037694235.1	JBBLTA000000000	SAMN39542711	JONWP152	Staphylococcus epidermidis
GCA_037699105.1	JBBLOS000000000	SAMN39542583	JONWP025	Staphylococcus epidermidis
GCA_037699085.1	JBBLOT000000000	SAMN39542584	JONWP026	Staphylococcus epidermidis
GCA_037698925.1	JBBLOW000000000	SAMN39542587	JONWP029	Staphylococcus epidermidis
GCA_037698905.1	JBBLOY000000000	SAMN39542589	JONWP031	Staphylococcus epidermidis
GCA_037698885.1	JBBLOZ000000000	SAMN39542590	JONWP032	Staphylococcus epidermidis
GCA_037698945.1	JBBLOV000000000	SAMN39542586	JONWP028	Staphylococcus epidermidis
GCA_037699445.1	JBBLOK000000000	SAMN39542575	JONWP017	Staphylococcus epidermidis
GCA_037699365.1	JBBLOL000000000	SAMN39542576	JONWP018	Staphylococcus epidermidis
GCA_037698325.1	JBBLPL000000000	SAMN39542602	JONWP044	Staphylococcus epidermidis
GCA_037698295.1	JBBLPM000000000	SAMN39542603	JONWP045	Staphylococcus epidermidis
GCA_037698285.1	JBBLPO000000000	SAMN39542605	JONWP047	Staphylococcus epidermidis
GCA_037698525.1	JBBLPG000000000	SAMN39542597	JONWP039	Staphylococcus epidermidis
GCA_037698495.1	JBBLPI000000000	SAMN39542599	JONWP041	Staphylococcus epidermidis
GCA_037698485.1	JBBLPH000000000	SAMN39542598	JONWP040	Staphylococcus epidermidis
GCA_037698465.1	JBBLPJ000000000	SAMN39542600	JONWP042	Staphylococcus epidermidis
GCA_037698585.1	JBBLPF000000000	SAMN39542596	JONWP038	Staphylococcus epidermidis
GCA_037698725.1	JBBLPA000000000	SAMN39542591	JONWP033	Staphylococcus epidermidis
GCA_037698705.1	JBBLPD000000000	SAMN39542594	JONWP036	Staphylococcus epidermidis
GCA_037698685.1	JBBLPC000000000	SAMN39542593	JONWP035	Staphylococcus epidermidis
GCA_037698745.1	JBBLPE000000000	SAMN39542595	JONWP037	Staphylococcus epidermidis
GCA_037698845.1	JBBLOX000000000	SAMN39542588	JONWP030	Staphylococcus epidermidis
GCA_037699045.1	JBBLOU000000000	SAMN39542585	JONWP027	Staphylococcus epidermidis
GCA_037700335.1	JBBLUA000000000	SAMN39542683	JONWP124	Staphylococcus epidermidis
GCA_037693745.1	JBBLSO000000000	SAMN39542723	JONWP164	Staphylococcus epidermidis
GCA_037699525.1	JBBLOI000000000	SAMN39542573	JONWP015	Staphylococcus gallinarum
GCA_037695445.1	JBBLSB000000000	SAMN39542671	JONWP112	Staphylococcus haemolyticus
GCA_037695195.1	JBBLSF000000000	SAMN39542675	JONWP116	Staphylococcus haemolyticus
GCA_037695345.1	JBBLSC000000000	SAMN39542672	JONWP113	Staphylococcus haemolyticus
GCA_037695335.1	JBBLSD000000000	SAMN39542673	JONWP114	Staphylococcus haemolyticus
GCA_037695175.1	JBBLSG000000000	SAMN39542676	JONWP117	Staphylococcus hominis
GCA_037695095.1	JBBLSH000000000	SAMN39542677	JONWP118	Staphylococcus hominis
GCA_037694985.1	JBBLSJ000000000	SAMN39542679	JONWP120	Staphylococcus hominis
GCA_037700315.1	JBBLTZ000000000	SAMN39542684	JONWP125	Staphylococcus hominis
GCA_037700295.1	JBBLTY000000000	SAMN39542685	JONWP126	Staphylococcus hominis
GCA_037700235.1	JBBLTW000000000	SAMN39542687	JONWP128	Staphylococcus hominis
GCA_037700455.1	JBBLUC000000000	SAMN39542681	JONWP122	Staphylococcus hominis
GCA_037700375.1	JBBLUB000000000	SAMN39542682	JONWP123	Staphylococcus hominis
GCA_037700155.1	JBBLTX000000000	SAMN39542686	JONWP127	Staphylococcus hominis
GCA_037700135.1	JBBLTV000000000	SAMN39542688	JONWP129	Staphylococcus hominis
GCA_037700495.1	JBBLUD000000000	SAMN39542680	JONWP121	Staphylococcus hominis
GCA_037700105.1	JBBLTU000000000	SAMN39542689	JONWP130	Staphylococcus intermedius
GCA_037700085.1	JBBLTT000000000	SAMN39542690	JONWP131	Staphylococcus lugdunensis
GCA_037700005.1	JBBLTS000000000	SAMN39542691	JONWP132	Staphylococcus lugdunensis
GCA_037694975.1	JBBLTQ000000000	SAMN39542693	JONWP134	Staphylococcus lugdunensis
GCA_037694565.1	JBBLTI000000000	SAMN39542702	JONWP143	Staphylococcus lugdunensis
GCA_037695005.1	JBBLTR000000000	SAMN39542692	JONWP133	Staphylococcus lugdunensis
GCA_037694685.1	JBBLTK000000000	SAMN39542700	JONWP141	Staphylococcus pasteuri
GCA_037694705.1	JBBLTL000000000	SAMN39542699	JONWP140	Staphylococcus pasteuri
GCA_037694695.1	JBBLTM000000000	SAMN39542698	JONWP139	Staphylococcus pasteuri
GCA_037694785.1	JBBLTO000000000	SAMN39542696	JONWP137	Staphylococcus pasteuri
GCA_037694885.1	JBBLTP000000000	SAMN39542694	JONWP135	Staphylococcus pasteuri
GCA_037694845.1	JBBLTN000000000	SAMN39542697	JONWP138	Staphylococcus pasteuri
GCA_037694625.1	JBBLTJ000000000	SAMN39542701	JONWP142	Staphylococcus pettenkoferi
GCA_037694485.1	JBBLTH000000000	SAMN39542704	JONWP145	Staphylococcus saprophyticus
GCA_037694475.1	JBBLTF000000000	SAMN39542706	JONWP147	Staphylococcus saprophyticus
GCA_037694465.1	JBBLTG000000000	SAMN39542705	JONWP146	Staphylococcus saprophyticus
GCA_037694305.1	JBBLTC000000000	SAMN39542709	JONWP150	Staphylococcus saprophyticus
GCA_037694385.1	JBBLTD000000000	SAMN39542708	JONWP149	Staphylococcus saprophyticus
GCA_037694425.1	JBBLTE000000000	SAMN39542707	JONWP148	Staphylococcus saprophyticus
GCA_037695495.1	JBBLSA000000000	SAMN39542670	JONWP111	Staphylococcus saprophyticus
GCA_037694245.1	JBBLTB000000000	SAMN39542710	JONWP151	Staphylococcus simulans
GCA_037699125.1	JBBLOR000000000	SAMN39542582	JONWP024	Staphylococcus ureilyticus
GCA_037699725.1	JBBLOA000000000	SAMN39542565	JONWP007	Staphylococcus warneri
GCA_037699825.1	JBBLNY000000000	SAMN39542563	JONWP005	Staphylococcus warneri
GCA_037693945.1	JBBLST000000000	SAMN39542718	JONWP159	Staphylococcus warneri
GCA_037694045.1	JBBLSX000000000	SAMN39542714	JONWP155	Staphylococcus warneri
GCA_037694015.1	JBBLSU000000000	SAMN39542717	JONWP158	Staphylococcus warneri
GCA_037694005.1	JBBLSV000000000	SAMN39542716	JONWP157	Staphylococcus warneri
GCA_037694085.1	JBBLSW000000000	SAMN39542715	JONWP156	Staphylococcus warneri
GCA_037694095.1	JBBLSY000000000	SAMN39542713	JONWP154	Staphylococcus warneri
GCA_037694225.1	JBBLSZ000000000	SAMN39542712	JONWP153	Staphylococcus warneri
GCA_037694995.1	JBBLSI000000000	SAMN39542678	JONWP119	Staphylococcus warneri
GCA_037693825.1	JBBLSR000000000	SAMN39542720	JONWP161	Staphylococcus warneri
GCA_037693535.1	JBBLSN000000000	SAMN39542724	JONWP165	Staphylococcus warneri
GCA_037693565.1	JBBLSL000000000	SAMN39542726	JONWP167	Staphylococcus warneri
GCA_037693605.1	JBBLSM000000000	SAMN39542725	JONWP166	Staphylococcus warneri
GCA_037693765.1	JBBLSQ000000000	SAMN39542721	JONWP162	Staphylococcus warneri
GCA_037693755.1	JBBLSP000000000	SAMN39542722	JONWP163	Staphylococcus warneri
GCA_037693855.1	JBBLSS000000000	SAMN39542719	JONWP160	Staphylococcus warneri
GCA_037693595.1	JBBLSK000000000	SAMN39542727	JONWP168	Staphylococcus xylosus

SRA Data Details

Parameter	Value
Data volume, Gbases	925
Data volume, Tbytes	0.28

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Human microbiota BASEHIT

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