See
Genome Information for Hermodice carunculata
Navigate Up
Navigate Across
This project collects the sequencing data and assemblies generated for Hermodice carunculata, common name marine fireworm, to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/bacterial-symbiosis-as-an-adaptation-to-extreme-environments-in-annelid-worms/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).
| Accession | PRJEB73890 |
| Type | Umbrella project |
| Organism | Hermodice carunculata[Taxonomy ID: 259844] Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Annelida; Polychaeta; Errantia; Eunicida; Amphinomidae; Hermodice; Hermodice carunculata |
| Submission | Registration date: 30-Mar-2024
WELLCOME SANGER INSTITUTE |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 22 |
| WGS master | 2 |
| Genomic DNA | 20 |
| SRA Experiments | 8 |
| Other datasets |
| BioSample | 5 |
| Assembly | 2 |
waHerCaru encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
1
1
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJEB74432 | Chromosomes | Hermodice carunculata | Hermodice carunculata (marine fireworm) genome assembly, waHerCaru1 (WELLCOME SANGER INSTITUTE) | | PRJEB74431 | Scaffolds | Hermodice carunculata | Hermodice carunculata (marine fireworm) genome assembly, waHerCaru1, alternate haplotype (WELLCOME SANGER INSTITUTE) |
|
| Other | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJEB73889 | Hermodice carunculata | Hermodice carunculata (marine fireworm), genomic and transcriptomic data (WELLCOME SANGER INSTITUTE) |
|