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Accession: PRJNA1141257 ID: 1141257

Flies as carriers of antimicrobial resistant (AMR) bacteria in Nigerian hospitals

The dissemination of antimicrobial resistance genes (ARGs) by flies in hospitals is concerning as antimicrobial resistant (AMR) infections pose a significant threat to human health. More...
AccessionPRJNA1141257
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 29-Jul-2024
University of Oxford
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)169
Other datasets
BioSample225
Assembly170
Assembly details:
Assembly levelNumber of Assemblies
170
170
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_041022475.1ContigJBFTDS000000000SAMN42884021
897-4
GCA_041023035.1ContigJBFTBT000000000SAMN42883944
65_2
GCA_041022395.1ContigJBFTDZ000000000SAMN42884031
952-2
GCA_041022405.1ContigJBFTDQ000000000SAMN42884017
892-1
GCA_041022485.1ContigJBFTDR000000000SAMN42884020
897-2
GCA_041022815.1ContigJBFTCC000000000SAMN42883957
70-1
GCA_041022545.1ContigJBFTDU000000000SAMN42884024
92-2
GCA_041023425.1ContigJBFTCL000000000SAMN42883968
753-1
GCA_041023365.1ContigJBFTCS000000000SAMN42883983
783-1
GCA_041025255.1ContigJBFSYY000000000SAMN42883853
180_1
GCA_041024415.1ContigJBFTAP000000000SAMN42883902
488-1
GCA_041024175.1ContigJBFTAZ000000000SAMN42883918
503-1
GCA_041024125.1ContigJBFTBC000000000SAMN42883924
52B
GCA_041023965.1ContigJBFTBL000000000SAMN42883935
59-2
GCA_041023955.1ContigJBFTBI000000000SAMN42883932
55-G
GCA_041024635.1ContigJBFTAB000000000SAMN42883885
357-2
GCA_041025175.1ContigJBFSYZ000000000SAMN42883854
184_1
GCA_041025065.1ContigJBFSZA000000000SAMN42883855
185_1
GCA_041023865.1ContigJBFTBQ000000000SAMN42883941
64_1
GCA_041023855.1ContigJBFTBK000000000SAMN42883934
59_1
GCA_041023315.1ContigJBFTCT000000000SAMN42883984
783-2
GCA_041023095.1ContigJBFTBR000000000SAMN42883942
64_2
GCA_041023045.1ContigJBFTBS000000000SAMN42883943
643-1
GCA_041022915.1ContigJBFTBZ000000000SAMN42883954
685-2
GCA_041023225.1ContigJBFTDC000000000SAMN42883996
824-1
GCA_041022825.1ContigJBFTCA000000000SAMN42883955
691-1
GCA_041024785.1ContigJBFSZU000000000SAMN42883877
288-1
GCA_041024345.1ContigJBFTAO000000000SAMN42883901
483-1
GCA_041024085.1ContigJBFTBD000000000SAMN42883925
533-3
GCA_041024675.1ContigJBFSZY000000000SAMN42883882
305-3
GCA_041022175.1ContigJBFTEB000000000SAMN42884034
1233-2
GCA_041023135.1ContigJBFTDT000000000SAMN42884023
898-4
GCA_041024885.1ContigJBFSZP000000000SAMN42883871
266-1
GCA_041024955.1ContigJBFSZO000000000SAMN42883870
263-1
GCA_041024815.1ContigJBFSZT000000000SAMN42883875
283-3
GCA_041024285.1ContigJBFTAL000000000SAMN42883898
425-4
GCA_041024775.1ContigJBFSZQ000000000SAMN42883872
269-1
GCA_041024895.1ContigJBFSZR000000000SAMN42883873
271-3
GCA_041023275.1ContigJBFTCY000000000SAMN42883991
816-2
GCA_041022515.1ContigJBFTDG000000000SAMN42884001
828-3
GCA_041022525.1ContigJBFTDJ000000000SAMN42884006
831-2
GCA_041022415.1ContigJBFTDD000000000SAMN42883998
826-1
GCA_041022235.1ContigJBFTEA000000000SAMN42884032
98-1
GCA_041022715.1ContigJBFTCJ000000000SAMN42883964
750-2
GCA_041022725.1ContigJBFTCI000000000SAMN42883963
749-3
GCA_041022665.1ContigJBFTCN000000000SAMN42883970
757-2
GCA_041022615.1ContigJBFTDF000000000SAMN42884000
828-1
GCA_041022645.1ContigJBFTCV000000000SAMN42883988
803-1
GCA_041022625.1ContigJBFTDE000000000SAMN42883999
827-2
GCA_041022755.1ContigJBFTCF000000000SAMN42883960
73-1
GCA_041023415.1ContigJBFTCQ000000000SAMN42883980
778-2
GCA_041023345.1ContigJBFTCU000000000SAMN42883985
784-1
GCA_041023195.1ContigJBFTCR000000000SAMN42883982
782-1
GCA_041023125.1ContigJBFTDW000000000SAMN42884027
94-1
GCA_041023325.1ContigJBFTCX000000000SAMN42883990
81-2
GCA_041023455.1ContigJBFTCO000000000SAMN42883971
758-1
GCA_041023665.1ContigJBFTDY000000000SAMN42884030
95-1
GCA_041024645.1ContigJBFTAE000000000SAMN42883889
404-1
GCA_041024385.1ContigJBFTAM000000000SAMN42883899
426-1
GCA_041024585.1ContigJBFTAC000000000SAMN42883886
380-5
GCA_041024565.1ContigJBFTAG000000000SAMN42883891
408-3
GCA_041024545.1ContigJBFTAK000000000SAMN42883896
418-1
GCA_041024575.1ContigJBFTAJ000000000SAMN42883894
412-1
GCA_041024495.1ContigJBFTAF000000000SAMN42883890
405-1
GCA_041024455.1ContigJBFTAI000000000SAMN42883893
411-1
GCA_041024465.1ContigJBFSZW000000000SAMN42883880
303-1
GCA_041024435.1ContigJBFTAN000000000SAMN42883900
427-1
GCA_041024145.1ContigJBFTBA000000000SAMN42883920
504-1
GCA_041024105.1ContigJBFTBB000000000SAMN42883923
519-1
GCA_041023935.1ContigJBFTBP000000000SAMN42883940
63_1
GCA_041023975.1ContigJBFTBH000000000SAMN42883931
559-1
GCA_041025435.1ContigJBFSYC000000000SAMN42883828
129-1
GCA_041025215.1ContigJBFSZB000000000SAMN42883856
188-1
GCA_041025015.1ContigJBFSZF000000000SAMN42883861
199-1
GCA_041025055.1ContigJBFSZE000000000SAMN42883860
198-3
GCA_041025135.1ContigJBFSZC000000000SAMN42883857
191-2
GCA_041025115.1ContigJBFSYX000000000SAMN42883852
17-1
GCA_041024845.1ContigJBFSZS000000000SAMN42883874
280-1
GCA_041024715.1ContigJBFTAD000000000SAMN42883888
399-1
GCA_041025655.1ContigJBFSYQ000000000SAMN42883845
153-1
GCA_041025635.1ContigJBFSYS000000000SAMN42883847
155-1
GCA_041025615.1ContigJBFSYV000000000SAMN42883850
164_1
GCA_041025595.1ContigJBFSYU000000000SAMN42883849
160_1
GCA_041025575.1ContigJBFSYR000000000SAMN42883846
154-1
GCA_041025935.1ContigJBFSXP000000000SAMN42883811
04-1
GCA_041025955.1ContigJBFSXV000000000SAMN42883819
1220-1
GCA_041025545.1ContigJBFSYO000000000SAMN42883843
15-1
GCA_041025525.1ContigJBFSYD000000000SAMN42883829
13-1
GCA_041025855.1ContigJBFSXW000000000SAMN42883820
1233-1
GCA_041024805.1ContigJBFSZV000000000SAMN42883878
289-1
GCA_041025195.1ContigJBFSZH000000000SAMN42883863
21_1
GCA_041023215.1ContigJBFTDA000000000SAMN42883994
818-1
GCA_041023285.1ContigJBFTCZ000000000SAMN42883992
816-3
GCA_041022275.1ContigJBFTDI000000000SAMN42884003
830-2
GCA_041022565.1ContigJBFTDO000000000SAMN42884014
87-4B
GCA_041024865.1ContigJBFSZI000000000SAMN42883864
229-1
GCA_041024665.1ContigJBFTAA000000000SAMN42883884
345-3
GCA_041025735.1ContigJBFSXQ000000000SAMN42883812
101-1
GCA_041024695.1ContigJBFSZX000000000SAMN42883881
304-1
GCA_041024755.1ContigJBFSZZ000000000SAMN42883883
309-1
GCA_041025355.1ContigJBFSYJ000000000SAMN42883836
138-1
GCA_041022295.1ContigJBFTDK000000000SAMN42884009
842-2
GCA_041022315.1ContigJBFTDN000000000SAMN42884013
87-4
GCA_041022185.1ContigJBFTDP000000000SAMN42884015
884-1
GCA_041022735.1ContigJBFTCH000000000SAMN42883962
749-2
GCA_041022635.1ContigJBFTCK000000000SAMN42883967
751-3
GCA_041022555.1ContigJBFTCW000000000SAMN42883989
803-2
GCA_041023235.1ContigJBFTDB000000000SAMN42883995
821-1
GCA_041023445.1ContigJBFTCP000000000SAMN42883974
760-2
GCA_041023335.1ContigJBFTCM000000000SAMN42883969
754-7
GCA_041024025.1ContigJBFTBJ000000000SAMN42883933
568-1
GCA_041024535.1ContigJBFTAH000000000SAMN42883892
41-1
GCA_041025905.1ContigJBFSXU000000000SAMN42883818
1213-1
GCA_041024995.1ContigJBFSZM000000000SAMN42883868
254-1
GCA_041022745.1ContigJBFTCD000000000SAMN42883958
70-2
GCA_041022875.1ContigJBFTCE000000000SAMN42883959
71-1
GCA_041025755.1ContigJBFSYB000000000SAMN42883827
1273-1
GCA_041022935.1ContigJBFTBY000000000SAMN42883950
677-1
GCA_041022925.1ContigJBFTBN000000000SAMN42883937
615-1
GCA_041023025.1ContigJBFTBV000000000SAMN42883946
662-4
GCA_041022835.1ContigJBFTCB000000000SAMN42883956
693-1
GCA_041022195.1ContigJBFTDX000000000SAMN42884029
949-2
GCA_041022305.1ContigJBFTDL000000000SAMN42884010
843-1
GCA_041022375.1ContigJBFTDH000000000SAMN42884002
830-1
GCA_041023145.1ContigJBFTBM000000000SAMN42883936
59-3
GCA_041024975.1ContigJBFSZN000000000SAMN42883869
254-2
GCA_041024935.1ContigJBFSZK000000000SAMN42883866
236-1
GCA_041024915.1ContigJBFSZL000000000SAMN42883867
253-1
GCA_041025095.1ContigJBFSZG000000000SAMN42883862
200-3
GCA_041025035.1ContigJBFSZJ000000000SAMN42883865
235-1
GCA_041025335.1ContigJBFSYF000000000SAMN42883831
131-1
GCA_041025395.1ContigJBFSYH000000000SAMN42883833
132-1
GCA_041025675.1ContigJBFSYP000000000SAMN42883844
150-1
GCA_041025275.1ContigJBFSYI000000000SAMN42883834
1363-1
GCA_041024055.1ContigJBFTBE000000000SAMN42883927
535-1
GCA_041024195.1ContigJBFTAX000000000SAMN42883916
500-1
GCA_041024235.1ContigJBFTAW000000000SAMN42883913
499-1
GCA_041025775.1ContigJBFSXY000000000SAMN42883822
1252-2
GCA_041025825.1ContigJBFSXT000000000SAMN42883817
119-1
GCA_041025815.1ContigJBFSXX000000000SAMN42883821
1251-1
GCA_041025505.1ContigJBFSYW000000000SAMN42883851
168-2
GCA_041025485.1ContigJBFSYE000000000SAMN42883830
130-1
GCA_041025465.1ContigJBFSYA000000000SAMN42883825
1269-2
GCA_041025795.1ContigJBFSXO000000000SAMN42883810
024-1
GCA_041025715.1ContigJBFSXZ000000000SAMN42883824
1262-1
GCA_041025695.1ContigJBFSYN000000000SAMN42883840
145-3
GCA_041024245.1ContigJBFTAS000000000SAMN42883908
494-2
GCA_041024275.1ContigJBFTAU000000000SAMN42883910
496-1
GCA_041023985.1ContigJBFTBF000000000SAMN42883928
535-2
GCA_041024065.1ContigJBFTBG000000000SAMN42883930
556-3
GCA_041024445.1ContigJBFTAQ000000000SAMN42883904
490-3
GCA_041024335.1ContigJBFTAT000000000SAMN42883909
495-2
GCA_041024355.1ContigJBFTAR000000000SAMN42883906
493-1
GCA_041025235.1ContigJBFSYT000000000SAMN42883848
158-1
GCA_041025155.1ContigJBFSZD000000000SAMN42883858
191-3
GCA_041025375.1ContigJBFSYK000000000SAMN42883837
1380-1
GCA_041025315.1ContigJBFSYM000000000SAMN42883839
143-1
GCA_041025295.1ContigJBFSYL000000000SAMN42883838
1396-2
GCA_041022975.1ContigJBFTBX000000000SAMN42883948
666-3
GCA_041022945.1ContigJBFTBW000000000SAMN42883947
662-5
GCA_041022425.1ContigJBFTDV000000000SAMN42884025
92-3
GCA_041022285.1ContigJBFTDM000000000SAMN42884011
844-1
GCA_041022885.1ContigJBFTCG000000000SAMN42883961
744-1
GCA_041023015.1ContigJBFTBU000000000SAMN42883945
656-2
GCA_041023115.1ContigJBFTBO000000000SAMN42883939
616-1
GCA_041025415.1ContigJBFSYG000000000SAMN42883832
1319-1
GCA_041024305.1ContigJBFTAV000000000SAMN42883912
498-2
GCA_041024155.1ContigJBFTAY000000000SAMN42883917
501-2
GCA_041025875.1ContigJBFSXS000000000SAMN42883815
1145-1
GCA_041025895.1ContigJBFSXR000000000SAMN42883814
1144-1

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