National Institutes of Health Clinical Center Kleb... (ID 188534) - BioProject

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Accession: PRJNA188534 ID: 188534

National Institutes of Health Clinical Center Klebsiella Outbreak 2011 Study

See Genome Information for Klebsiella pneumoniae

Whole genome sequencing of carbapenem-resistant Klebsiella pneumoniae.

Accession	PRJNA188534
Type	Umbrella project (Subtype:Disease)
Organism	Klebsiella pneumoniae subsp. pneumoniae[Taxonomy ID: 72407] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella; Klebsiella pneumoniae complex; Klebsiella pneumoniae; Klebsiella pneumoniae subsp. pneumoniae
Publications	Snitkin ES et al., "Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing.", Sci Transl Med, 2012 Aug 22;4(148):148ra116
Submission	Registration date: 5-Feb-2013 NISC
Relevance	Medical

Project Data:

Parameter	Value
Data volume, Gbases	14
Data volume, Mbytes	42451

National Institutes of Health Clinical Center Klebsiella Outbreak 2011 Study encompasses the following 23 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

2
18
3
23

BioProject accession	Assembly level	Organism	Title
PRJNA73191	Complete genome	Klebsiella pneumoniae subsp. pneumoniae KPNIH1	Klebsiella pneumoniae subsp. pneumoniae KPNIH1 Genome sequencing (NIH Intramural Sequencing...)
PRJNA73843	Complete genome	Klebsiella pneumoniae subsp. pneumoniae KPNIH10	Klebsiella pneumoniae subsp. pneumoniae KPNIH10 Genome sequencing (NISC)
PRJNA73845	Contigs	Klebsiella pneumoniae subsp. pneumoniae KPNIH11	Klebsiella pneumoniae subsp. pneumoniae KPNIH11 Genome sequencing and assembly (NISC)
PRJNA80219	Contigs	Klebsiella pneumoniae subsp. pneumoniae KPNIH12	Klebsiella pneumoniae subsp. pneumoniae KPNIH12 Genome sequencing and assembly (NISC)
PRJNA80221	SRA or Trace	Klebsiella pneumoniae subsp. pneumoniae KPNIH13	Klebsiella pneumoniae subsp. pneumoniae KPNIH13 Genome sequencing (NISC)