The datasets were collected for demonstrating a hierarchical genome
assembly process (HGAP) to generate high quality
de novo microbial genome assemblies. The new method utilizes a single,
long insert shotgun DNA library in
conjunction with Single Molecule, Real Time (SMRT) DNA sequencing and
obviates the need for additional sample
preparation and sequencing data sets required for previously described
hybrid assembly strategies. We demonstrate
the efficient de novo assembly from genomic DNA to a finished genome
sequence for several microorganisms.
| Accession | PRJNA193494 |
| Type | Umbrella Comparative genomics project (Subtype:Comparative genomics) |
| Submission | Registration date: 20-Mar-2013
Pacific Biosciences |
| Relevance | assembly algorithm |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 8 |
| WGS master | 2 |
| Genomic DNA | 1 |
| SRA Experiments | 4 |
| Protein Sequences | 3056 |
| Other datasets |
| BioSample | 4 |
| Assembly | 3 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Contigs Total |
1
2
3
|
|