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Accession: PRJNA208244 ID: 208244

Trematomus bernacchii (emerald rockcod)

Trematomus bernacchii Transcriptome or Gene expression

See Genome Information for Trematomus bernacchii
Sequencing reads of Trematomus bernacchii for three tissues (liver, gill and brain) exposed to two treatments (control and heat shock).
AccessionPRJNA208244
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismTrematomus bernacchii[Taxonomy ID: 40690]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus; Trematomus bernacchii
PublicationsHuth TJ et al., "De novo assembly and characterization of tissue specific transcriptomes in the emerald notothen, Trematomus bernacchii.", BMC Genomics, 2013 Nov 20;14:805
Grants
  • "Identifying adaptive responses of polar fishes in a vulnerable ecosystem" (Grant ID ANT-1040945, National Science Foundation)
SubmissionRegistration date: 12-Jun-2013
University of South Carolina - Biological Sciences
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample7
SRA Data Details
ParameterValue
Data volume, Mbases412
Data volume, Mbytes939

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