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Here, we report the use of the MinION to resolve the structure of a composite transposon, encoding multidrug resistance, in Salmonella Typhi Haplotype 58 - a multidrug resistant strain that has undergone global expansion.
More...Here, we report the use of the MinION to resolve the structure of a composite transposon, encoding multidrug resistance, in Salmonella Typhi Haplotype 58 - a multidrug resistant strain that has undergone global expansion. MinION data from a single 18-hour run was used to scaffold Illumina data and identify the chromosomal insertion site and structure of the island.
Less...| Accession | PRJNA261016 |
| Data Type | Genome sequencing |
| Scope | Monoisolate |
| Organism | Salmonella enterica subsp. enterica serovar Typhi[Taxonomy ID: 90370] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica serovar Typhi |
| Submission | Registration date: 15-Sep-2014
Public Health England |
| Relevance | Medical |
| Locus Tag Prefix | LJ09 |
Project Data:
| Resource Name | Number
of Links |
|---|
| BioSample | 1 |
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