Enterobacteriaceae Carbapenemase Diversity genome ... (ID 292902) - BioProject

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Accession: PRJNA292902 ID: 292902

Enterobacteriaceae Carbapenemase Diversity genome sequencing and assembly

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This project is a component of the FDA-CDC Antimicrobial Resistance Bank

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24 additional projects are components of the FDA-CDC Antimicrobial Resistance Bank.

Collection of bacterial pathogens that consist of carbapenemase-producing Enterobacteriaceae representing a diversity of species

Accession	PRJNA292902
Data Type	Genome sequencing and assembly
Scope	Multispecies
Keyword	GMI
Submission	Registration date: 14-Aug-2015 Centers for Disease Control and Prevention
Related Resources	FDA-CDC Antimicrobial Resistance Bank Panels
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	193
WGS master	2
Genomic DNA	191
SRA Experiments	136
Protein Sequences	262923
Other datasets
BioSample	54
Assembly	53
Supplementary data
Base modification	153

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

51
2
53

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_003571565.1		6	SAMN04014957	-	Citrobacter freundii
GCA_003204265.1		9	SAMN04014998	AR_0157	Citrobacter sp. CRE-46
GCA_002192355.1		2	SAMN04015004	AR_0163	Enterobacter cloacae complex sp.
GCA_002204775.1		3	SAMN04014977	AR_0136	Enterobacter cloacae complex sp.
GCA_003204095.1		6	SAMN04014995	AR_0154	Enterobacter cloacae complex sp.
GCA_003010695.1		1	SAMN04014973	FDA-CDC-AR_0132	Enterobacter cloacae complex sp. FDA-CDC-AR_0132
GCA_003071645.1		1	SAMN04015005	FDA-CDC-AR_0164	Enterobacter cloacae complex sp. FDA-CDC-AR_0164
GCA_002180275.1		4	SAMN04014969	AR_0128	Escherichia coli
GCA_002180215.1		3	SAMN04014992	AR_0151	Escherichia coli
GCA_002180135.1		5	SAMN04015003	AR_0162	Escherichia coli
GCA_002180095.1		4	SAMN04014960	AR_0119	Escherichia coli
GCA_002180055.1		3	SAMN04014990	AR_0149	Escherichia coli
GCA_002192295.1		4	SAMN04014991	AR_0150	Escherichia coli
GCA_002192275.1		4	SAMN04014955	AR_0114	Escherichia coli
GCA_002201835.1		4	SAMN04014978	AR_0137	Escherichia coli
GCA_002055635.1		4	SAMN04014959	AR_0118	Escherichia coli
GCA_003071285.1		2	SAMN04015002	AR_0161	Klebsiella aerogenes
GCA_002072655.1		2	SAMN04014988	AR_0147	Klebsiella oxytoca
GCA_003204465.1		3	SAMN04014981	AR_0140	Klebsiella pneumoniae
GCA_003571545.1		3	SAMN04014976	-	Klebsiella pneumoniae
GCA_003571585.1		3	SAMN04015001	-	Klebsiella pneumoniae
GCA_003071305.1		3	SAMN04014982	AR_0141	Klebsiella pneumoniae
GCA_003073315.1		4	SAMN04014983	AR_0142	Klebsiella pneumoniae
GCA_003069525.1		4	SAMN04014994	AR_0153	Klebsiella pneumoniae
GCA_002192335.1		6	SAMN04014954	AR_0113	Klebsiella pneumoniae
GCA_002192315.1		4	SAMN04014967	AR_0126	Klebsiella pneumoniae
GCA_002197505.1		6	SAMN04014966	AR_0125	Klebsiella pneumoniae
GCA_002192375.1		5	SAMN04014979	AR_0138	Klebsiella pneumoniae
GCA_002197225.1		5	SAMN04014961	AR_0120	Klebsiella pneumoniae
GCA_002202255.1		5	SAMN04014989	AR_0148	Klebsiella pneumoniae
GCA_002202235.1		6	SAMN04014993	AR_0152	Klebsiella pneumoniae
GCA_002202215.1		5	SAMN04014986	AR_0145	Klebsiella pneumoniae
GCA_002202195.1		5	SAMN04014980	AR_0139	Klebsiella pneumoniae
GCA_002180175.1		4	SAMN04014987	-	Klebsiella pneumoniae
GCA_002180155.1		6	SAMN04014953	AR_0112	Klebsiella pneumoniae
GCA_002180255.1		5	SAMN04014999	AR_0158	Klebsiella pneumoniae
GCA_002180315.1		5	SAMN04014984	AR_0143	Klebsiella pneumoniae
GCA_002180295.1		6	SAMN04014970	AR_0129	Klebsiella pneumoniae
GCA_002056385.1		5	SAMN04014956	AR_0115	Klebsiella pneumoniae
GCA_002055765.1		6	SAMN04014958	AR_0117	Klebsiella pneumoniae
GCA_016088045.2	AAXWHX000000000		SAMN04014985	FDA-CDC-AR_0144	Kluyvera ascorbata
GCA_003071325.1		3	SAMN04014974	AR_0133	Morganella morganii
GCA_002180115.1		2	SAMN04015000	AR_0159	Proteus mirabilis
GCA_002180235.1		2	SAMN04014996	AR_0155	Proteus mirabilis
GCA_002197405.1		4	SAMN04014997	AR_0156	Proteus mirabilis
GCA_016088515.2	AAXWHZ000000000		SAMN04014975	FDA-CDC-AR_0134	Raoultella ornithinolytica
GCA_003571625.1		3	SAMN04014968	-	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_003071625.1		1	SAMN04014962	AR_0121	Serratia marcescens
GCA_003071605.1		1	SAMN04014964	AR_0123	Serratia marcescens
GCA_003071585.1		1	SAMN04014971	AR_0130	Serratia marcescens
GCA_003071565.1		1	SAMN04014965	AR_0124	Serratia marcescens
GCA_003204405.1		1	SAMN04014963	AR_0122	Serratia marcescens
GCA_003204075.1		1	SAMN04014972	AR_0131	Serratia marcescens

SRA Data Details

Parameter	Value
Data volume, Gbases	155
Data volume, Tbytes	0.35

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Enterobacteriaceae Carbapenemase Diversity genome sequencing and assembly

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