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Accession: PRJEB8829 ID: 295449

RNA-seq of Leishmania mexicana promastigotes, axenic amastigotes and intracellular amastigotes

We used Illumina sequencing of poly-A selected RNA of Leishmania mexicana (WHO strain MNYC/BZ/62/M379) culture-adapted promastigotes (PRO), axenic amastigotes (AXA) and intracellular amastigotes (AMA) in mouse bone marrow derived macrophages (BMDM), 24h after infection, to map 5' and 3' ends of Leishmania transcripts and determine transcript abundances. More...
AccessionPRJEB8829
Data TypeTranscriptome or Gene expression
ScopeMonoisolate
PublicationsFiebig M et al., "Comparative Life Cycle Transcriptomics Revises Leishmania mexicana Genome Annotation and Links a Chromosome Duplication with Parasitism of Vertebrates.", PLoS Pathog, 2015 Oct;11(10):e1005186
SubmissionRegistration date: 12-Sep-2015
European Bioinformatics Institute
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments18
Publications
PubMed1
PMC1
Other datasets
BioSample18
SRA Data Details
ParameterValue
Data volume, Gbases66
Data volume, Mbytes46568

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