Streptococcus pneumoniae (ID 317732) - BioProject

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Accession: PRJNA317732 ID: 317732

Streptococcus pneumoniae

Invasive disease caused simultaneously by more than one serotype of Streptococcus pneumoniae, South Africa

See Genome Information for Streptococcus pneumoniae

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747 additional projects are related by organism.

The study compare genomes of Streptococcus pneumoniae isolates belonging to different serotypes that were detected simultaneously from patients with invasive disease in South Africa. More...

Accession	PRJNA317732
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Streptococcus pneumoniae[Taxonomy ID: 1313] Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
Submission	Registration date: 2-Aug-2016 National Institute for Communicable Diseases
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12889
WGS master	43
Protein Sequences	90102
Other datasets
BioSample	43
Assembly	43

Assembly details:

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Assembly level

Number of Assemblies

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Contig

Total

23
20
43

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001735995.1	LZNW00000000	SAMN04337326	29170-6A	Streptococcus pneumoniae
GCA_001735975.1	LZNV00000000	SAMN04337325	22874-14	Streptococcus pneumoniae
GCA_001735965.1	LZNU00000000	SAMN04337324	22874-6B	Streptococcus pneumoniae
GCA_001728845.1	LYQG00000000	SAMN04337328	29546-19A	Streptococcus pneumoniae
GCA_001728875.1	LYQH00000000	SAMN04337329	29546-6B	Streptococcus pneumoniae
GCA_001720095.1	MDYE00000000	SAMN04337295	515-19F	Streptococcus pneumoniae
GCA_001720075.1	MDYG00000000	SAMN04337294	515-6A	Streptococcus pneumoniae
GCA_001720085.1	MDYH00000000	SAMN04337319	20893-14	Streptococcus pneumoniae
GCA_001720055.1	MDYF00000000	SAMN04337296	699-6A	Streptococcus pneumoniae
GCA_001720025.1	MDYC00000000	SAMN04337299	1229-14	Streptococcus pneumoniae
GCA_001719965.1	MDYB00000000	SAMN04337300	7200	Streptococcus pneumoniae
GCA_001719975.1	MDXU00000000	SAMN04337310	16599-9V	Streptococcus pneumoniae
GCA_001719955.1	MDXZ00000000	SAMN04337306	10598-19F	Streptococcus pneumoniae
GCA_001719945.1	MDXS00000000	SAMN04337312	18839-19A	Streptococcus pneumoniae
GCA_001719905.1	MDXP00000000	SAMN04337315	18858	Streptococcus pneumoniae
GCA_001719895.1	MDYA00000000	SAMN04337301	7204	Streptococcus pneumoniae
GCA_001719885.1	MDXQ00000000	SAMN04337313	18839-3	Streptococcus pneumoniae
GCA_001719865.1	MDXY00000000	SAMN04337303	8227-19F	Streptococcus pneumoniae
GCA_001719815.1	MDXT00000000	SAMN04337311	16599-15A	Streptococcus pneumoniae
GCA_001719825.1	MDXX00000000	SAMN04337307	10598-6A	Streptococcus pneumoniae
GCA_001719805.1	MDXW00000000	SAMN04337309	12985-6A	Streptococcus pneumoniae
GCA_001719775.1	MDXV00000000	SAMN04337308	12985-14	Streptococcus pneumoniae
GCA_001719755.1	MDXR00000000	SAMN04337314	18856	Streptococcus pneumoniae
GCA_001719745.1	MDXM00000000	SAMN04337321	21320-6B	Streptococcus pneumoniae
GCA_001719705.1	MDXN00000000	SAMN04337317	20731-6B	Streptococcus pneumoniae
GCA_001719685.1	MDXL00000000	SAMN04337320	21320-19F	Streptococcus pneumoniae
GCA_001719695.1	MDXO00000000	SAMN04337316	20731-14	Streptococcus pneumoniae
GCA_001715955.1	MCJA00000000	SAMN04337333	34400	Streptococcus pneumoniae
GCA_001715925.1	MCIZ00000000	SAMN04337332	34399	Streptococcus pneumoniae
GCA_001715905.1	MCIY00000000	SAMN04337331	30024	Streptococcus pneumoniae
GCA_001715895.1	MCIX00000000	SAMN04337327	29170-12F	Streptococcus pneumoniae
GCA_001715865.1	MCIW00000000	SAMN04337323	22421	Streptococcus pneumoniae
GCA_001697085.1	LWGV00000000	SAMN04337334	37502	Streptococcus pneumoniae
GCA_001697025.1	LWGX00000000	SAMN04337337	39287	Streptococcus pneumoniae
GCA_001697045.1	LWGU00000000	SAMN04337330	30023	Streptococcus pneumoniae
GCA_001697015.1	LWGW00000000	SAMN04337336	39286	Streptococcus pneumoniae
GCA_001697005.1	LWGT00000000	SAMN04337322	22522	Streptococcus pneumoniae
GCA_001857565.1	MDYD00000000	SAMN04337298	1229-19A	Streptococcus pneumoniae
GCA_002246925.1	NNBW00000000	SAMN04337302	8227-15B	Streptococcus pneumoniae
GCA_002246915.1	NNBX00000000	SAMN04337297	699-14	Streptococcus pneumoniae
GCA_002265125.1	NOIM00000000	SAMN04337304	8788-23F	Streptococcus pneumoniae
GCA_002265095.1	NPJX00000000	SAMN04337305	8788-22	Streptococcus pneumoniae
GCA_002265215.1	NOIL00000000	SAMN04337318	20893-6B	Streptococcus pneumoniae

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Streptococcus pneumoniae

Invasive disease caused simultaneously by more than one serotype of Streptococcus pneumoniae, South Africa

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