Escherichia (ID 418674) - BioProject

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Accession: PRJNA418674 ID: 418674

Escherichia

The Genome sequencing and assembly of Escherichia spp.

Accession	PRJNA418674
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Feng Y et al., "Escherichia coli of sequence type 3835 carrying bla NDM-1, bla CTX-M-15, bla CMY-42 and bla SHV-12.", Sci Rep, 2015 Jul 21;5:12275
Submission	Registration date: 16-Nov-2017 West China Hospital, Sichuan University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	4182
WGS master	24
Genomic DNA	160
SRA Experiments	92
Protein Sequences	127966
Publications
PubMed	1
PMC	1
Other datasets
BioSample	92
Assembly	48

Assembly details:

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Assembly level

Number of Assemblies

25
16
7
48

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_023554575.1	JAMJWA000000000		SAMN28537734	140032	Escherichia coli
GCA_001867205.1	LSMG00000000		SAMN04482604	WCHEC1613	Escherichia coli
GCA_002870165.1		3	SAMN08281024	SCEC020007	Escherichia coli
GCA_002811605.1	NTBG00000000		SAMN07602136	SCEC020076	Escherichia coli
GCA_002811725.1	NTBF00000000		SAMN07602137	SCEC020088	Escherichia coli
GCA_002225075.1	NMQY00000000		SAMN07340853	WCHEC-LL123	Escherichia coli
GCA_002154095.1	MSQX00000000		SAMN06197013	WCHEC050609	Escherichia coli
GCA_002154075.1	MSRB00000000		SAMN05938917	WCHEC050606	Escherichia coli
GCA_002154135.1	MSRA00000000		SAMN06197017	WCHEC050622	Escherichia coli
GCA_002153985.1	MSQZ00000000		SAMN06197016	WCHEC050618	Escherichia coli
GCA_002154035.1	MSQY00000000		SAMN06197015	WCHEC050614	Escherichia coli
GCA_002165055.1	NGVC00000000		SAMN06909181	WCHEC020033	Escherichia coli
GCA_002165045.1	NGVB00000000		SAMN06909182	SCEC020066	Escherichia coli
GCA_002165035.1	NGVK00000000		SAMN06909173	SCEC020004	Escherichia coli
GCA_002165005.1	NGVJ00000000		SAMN06909174	SCEC020005	Escherichia coli
GCA_002164985.1	NGVI00000000		SAMN06909175	WCHEC7	Escherichia coli
GCA_002164955.1	NGVH00000000		SAMN06909176	SCEC020016	Escherichia coli
GCA_002164935.1	NGVE00000000		SAMN06909179	WCHEC020028	Escherichia coli
GCA_002164915.1	NGVA00000000		SAMN06909183	SCEC020068	Escherichia coli
GCA_002165115.2		7	SAMN06909172	SCEC020001	Escherichia coli
GCA_002164595.2		5	SAMN06231252	WCHEC000837	Escherichia coli
GCA_002165095.2		13	SAMN06909177	SCEC020022	Escherichia coli
GCA_002811555.3		7	SAMN07510673	WCHEC025943	Escherichia coli
GCA_003268695.1		5	SAMN09202772	WCHEC035148	Escherichia coli
GCA_003051985.2		4	SAMN06209728	WCHEC005784	Escherichia coli
GCA_003719695.1	RIAW00000000		SAMN08932732	WCHEC005828	Escherichia coli
GCA_003711045.1		5	SAMN08932733	WCHEC020031	Escherichia coli
GCA_001014795.2	LCWG00000000		SAMN03083281	WCHEC005008	Escherichia coli
GCA_004295365.1		9	SAMN10956393	WCHEC025970	Escherichia coli
GCA_002164865.2		8	SAMN06909180	WCHEC020032	Escherichia coli
GCA_002164975.2		5	SAMN06909178	SCEC020026	Escherichia coli
GCA_002155015.2	MUWZ00000000		SAMN06197012	050604	Escherichia coli
GCA_022559685.1		8	SAMN06209720	WCHEC005215	Escherichia coli
GCA_022559065.1		8	SAMN12623214	WCHEC115106	Escherichia coli
GCA_022559045.1		5	SAMN08932753	WCHEC040047	Escherichia coli
GCA_022559025.1		11	SAMN12158048	WCHEC025985	Escherichia coli
GCA_022559005.1		5	SAMN12623215	WCHEC025157	Escherichia coli
GCA_022558985.1		5	SAMN09229080	WCHEC035148	Escherichia coli
GCA_022359985.1	JAKSEK000000000		SAMN25987976	035166	Escherichia coli
GCA_002164645.3		5	SAMN06909152	WCHEC4533	Escherichia coli
GCA_002164635.4		4	SAMN06909153	WCHEC96200	Escherichia coli
GCA_001969285.4		6	SAMN06197014	WCHEC050613	Escherichia coli
GCA_002850675.5		7	SAMN07768275	SCEC020023	Escherichia coli
GCA_002945135.3		9	SAMN06209723	WCHEC005237	Escherichia coli
GCA_013426115.1		5	SAMN15447143	005008	Escherichia coli
GCA_013426095.1		5	SAMN09202771	WCHEC035125	Escherichia coli
GCA_013426075.1		5	SAMN08932748	WCHEC035123	Escherichia coli
GCA_041361315.1	JBGJJC000000000		SAMN09842379	WCHEC115101	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	125
Data volume, Mbytes	51051

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Escherichia

The Genome sequencing and assembly of Escherichia spp.

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