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Accession: PRJNA431656 ID: 431656

Escherichia coli

Escherichia coli Genome sequencing and assembly

See Genome Information for Escherichia coli
We will carry out comparative genomic analysis,which include the genomic synteny, the core genes and specific genes, gene family phylogenetic tree, SNP.
AccessionPRJNA431656
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsXu Y et al., "Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China.", Gut Pathog, 2018;10:8
SubmissionRegistration date: 1-Mar-2021
China CDC
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)96
Publications
PubMed1
PMC1
Other datasets
BioSample96
Assembly96
Assembly details:
Assembly levelNumber of Assemblies
96
96
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_017117105.1ContigPQOX00000000SAMN08397835
EP019
GCA_017119185.1ContigPQRY00000000SAMN08398418
EP371
GCA_017119385.1ContigPQSG00000000SAMN08398426
EP399
GCA_017119275.1ContigPQSC00000000SAMN08398422
EP393
GCA_017119265.1ContigPQSB00000000SAMN08398421
EP390
GCA_017119235.1ContigPQSA00000000SAMN08398420
EP389
GCA_017119225.1ContigPQRZ00000000SAMN08398419
EP372
GCA_017119125.1ContigPQRV00000000SAMN08398415
EP363
GCA_017119085.1ContigPQRO00000000SAMN08398408
EP344
GCA_017119065.1ContigPQRQ00000000SAMN08398410
EP354
GCA_017119075.1ContigPQRU00000000SAMN08398414
EP359
GCA_017119005.1ContigPQRM00000000SAMN08398406
EP319
GCA_017118965.1ContigPQRN00000000SAMN08398407
EP320
GCA_017118895.1ContigPQRL00000000SAMN08398405
EP318
GCA_017119525.1ContigPQSO00000000SAMN08398434
EP416
GCA_017119505.1ContigPQSN00000000SAMN08398433
EP414
GCA_017119445.1ContigPQSM00000000SAMN08398432
EP413
GCA_017119465.1ContigPQSJ00000000SAMN08398429
EP409
GCA_017119435.1ContigPQSL00000000SAMN08398431
EP411
GCA_017119425.1ContigPQSK00000000SAMN08398430
EP410
GCA_017119405.1ContigPQSI00000000SAMN08398428
EP407
GCA_017119365.1ContigPQSH00000000SAMN08398427
EP404
GCA_017119315.1ContigPQSF00000000SAMN08398425
EP397
GCA_017119325.1ContigPQSD00000000SAMN08398423
EP395
GCA_017119305.1ContigPQSE00000000SAMN08398424
EP396
GCA_017118875.1ContigPQRG00000000SAMN08398400
EP289
GCA_017118865.1ContigPQRK00000000SAMN08398404
EP308
GCA_017118815.1ContigPQRJ00000000SAMN08398403
EP297
GCA_017118805.1ContigPQRH00000000SAMN08398401
EP290
GCA_017118765.1ContigPQRI00000000SAMN08398402
EP292
GCA_017118705.1ContigPQRF00000000SAMN08398399
EP288
GCA_017118635.1ContigPQRC00000000SAMN08398396
EP279
GCA_017118615.1ContigPQRE00000000SAMN08398398
EP287
GCA_017118605.1ContigPQRD00000000SAMN08398397
EP280
GCA_017118535.1ContigPQRB00000000SAMN08398395
EP273
GCA_017118525.1ContigPQRA00000000SAMN08398394
EP272
GCA_017118435.1ContigPQQX00000000SAMN08398391
EP242
GCA_017118365.1ContigPQQW00000000SAMN08398390
EP239
GCA_017118385.1ContigPQQZ00000000SAMN08398393
EP270
GCA_017118355.1ContigPQQY00000000SAMN08398392
EP269
GCA_017118345.1ContigPQQV00000000SAMN08398389
EP213
GCA_017118255.1ContigPQQU00000000SAMN08398388
EP208
GCA_017118195.1ContigPQRW00000000SAMN08398416
EP365
GCA_017118175.1ContigPQQT00000000SAMN08398387
EP197
GCA_017118165.1ContigPQRX00000000SAMN08398417
EP367
GCA_017118145.1ContigPQRT00000000SAMN08398413
EP358
GCA_017118125.1ContigPQRS00000000SAMN08398412
EP356
GCA_017118095.1ContigPQRP00000000SAMN08398409
EP351
GCA_017118085.1ContigPQRR00000000SAMN08398411
EP355
GCA_017118065.1ContigPQQS00000000SAMN08398386
EP193
GCA_017118045.1ContigPQQR00000000SAMN08398385
EP191
GCA_017118025.1ContigPQQP00000000SAMN08398383
EP181
GCA_017117995.1ContigPQQQ00000000SAMN08398384
EP182
GCA_017117985.1ContigPQQO00000000SAMN08398382
EP175
GCA_017117965.1ContigPQQN00000000SAMN08398381
EP171
GCA_017117925.1ContigPQQM00000000SAMN08398380
EP168
GCA_017117895.1ContigPQQJ00000000SAMN08398377
EP161
GCA_017117915.1ContigPQQL00000000SAMN08398379
EP167
GCA_017117885.1ContigPQQK00000000SAMN08398378
EP163
GCA_017117865.1ContigPQQI00000000SAMN08398376
EP160
GCA_017117845.1ContigPQQH00000000SAMN08398375
EP158
GCA_017117805.1ContigPQQE00000000SAMN08398372
EP153
GCA_017117795.1ContigPQQG00000000SAMN08398374
EP156
GCA_017117785.1ContigPQQF00000000SAMN08398373
EP155
GCA_017117765.1ContigPQQC00000000SAMN08398370
EP150
GCA_017117745.1ContigPQQD00000000SAMN08398371
EP151
GCA_017117715.1ContigPQQB00000000SAMN08398369
EP149
GCA_017117695.1ContigPQQA00000000SAMN08398368
EP147
GCA_017117685.1ContigPQPY00000000SAMN08398265
EP143
GCA_017117665.1ContigPQPZ00000000SAMN08398367
EP146
GCA_017117645.1ContigPQPX00000000SAMN08398264
EP142
GCA_017117625.1ContigPQPW00000000SAMN08398263
EP137
GCA_017117605.1ContigPQPU00000000SAMN08398261
EP105
GCA_017117585.1ContigPQPV00000000SAMN08398262
EP113
GCA_017117565.1ContigPQPT00000000SAMN08398260
EP103
GCA_017117545.1ContigPQPS00000000SAMN08398259
EP101
GCA_017117515.1ContigPQPR00000000SAMN08398258
EP096
GCA_017117505.1ContigPQPQ00000000SAMN08398257
EP090
GCA_017117485.1ContigPQPP00000000SAMN08398256
EP088
GCA_017117465.1ContigPQPO00000000SAMN08398255
EP084
GCA_017117445.1ContigPQPM00000000SAMN08398253
EP079
GCA_017117425.1ContigPQPK00000000SAMN08398251
EP074
GCA_017117405.1ContigPQPN00000000SAMN08398254
EP082
GCA_017117385.1ContigPQPL00000000SAMN08398252
EP075
GCA_017117365.1ContigPQPI00000000SAMN08398249
EP064
GCA_017117335.1ContigPQPJ00000000SAMN08398250
EP066
GCA_017117325.1ContigPQPH00000000SAMN08398248
EP058
GCA_017117295.1ContigPQPG00000000SAMN08398247
EP053
GCA_017117285.1ContigPQPF00000000SAMN08398246
EP052
GCA_017117265.1ContigPQPD00000000SAMN08398244
EP045
GCA_017117235.1ContigPQPC00000000SAMN08398243
EP043
GCA_017117225.1ContigPQPE00000000SAMN08398245
EP050
GCA_017117205.1ContigPQPB00000000SAMN08397839
EP033
GCA_017117185.1ContigPQPA00000000SAMN08397838
EP031
GCA_017117165.1ContigPQOY00000000SAMN08397836
EP021
GCA_017117135.1ContigPQOZ00000000SAMN08397837
EP028

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