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Accession: PRJNA434044 ID: 434044

Bacteria

Bacteria Genome sequencing and assembly

Whole genome sequencing identified mcr-1 positive E. coli and K. Pneumoniae total from nine samples which collected three each in Heilongjiang, Anhui, Guangdong.
AccessionPRJNA434044
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 14-Feb-2018
South China Agricultural University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10060
WGS master59
Protein Sequences293218
Other datasets
BioSample59
Assembly59
Assembly details:
Assembly levelNumber of Assemblies
40
19
59
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002959375.1ContigPUDY00000000SAMN08534260
YH17133
GCA_002959355.1ScaffoldPUDU00000000SAMN08534277
YH17152
GCA_002959335.1ScaffoldPUDS00000000SAMN08534288
YH17163
GCA_002959315.1ContigPUEB00000000SAMN08534255
YH17128
GCA_002959295.1ContigPUEA00000000SAMN08534256
YH17129
GCA_002959275.1ScaffoldPUDZ00000000SAMN08534258
YH17131
GCA_002959205.1ScaffoldPUDV00000000SAMN08534275
YH17150
GCA_002959225.1ScaffoldPUDW00000000SAMN08534264
YH17137
GCA_002959165.1ContigPUDX00000000SAMN08534261
YH17134
GCA_002959215.1ScaffoldPUDT00000000SAMN08534282
YH17157
GCA_002941985.1ScaffoldPTNT00000000SAMN08534262
YH17135
GCA_002941065.1ScaffoldPTMC00000000SAMN08534310
YH17192
GCA_002941965.1ContigPTNP00000000SAMN08534267
YH17142
GCA_002941945.1ScaffoldPTNL00000000SAMN08534271
YH17146
GCA_002941925.1ScaffoldPTNH00000000SAMN08534276
YH17151
GCA_002941905.1ScaffoldPTNF00000000SAMN08534279
YH17154
GCA_002941885.1ScaffoldPTNA00000000SAMN08534285
YH17160
GCA_002941845.1ScaffoldPTMT00000000SAMN08534293
YH17169
GCA_002941855.1ScaffoldPTMV00000000SAMN08534291
YH17166
GCA_002941825.1ScaffoldPTMS00000000SAMN08534294
YH17170
GCA_002941765.1ScaffoldPTMH00000000SAMN08534305
YH17185
GCA_002941795.1ScaffoldPTMO00000000SAMN08534298
YH17174
GCA_002941785.1ScaffoldPTMJ00000000SAMN08534303
YH17180
GCA_002941745.1ScaffoldPTNS00000000SAMN08534263
YH17136
GCA_002941725.1ContigPTNR00000000SAMN08534265
YH17140
GCA_002941705.1ContigPTNQ00000000SAMN08534266
YH17141
GCA_002941685.1ContigPTNO00000000SAMN08534268
YH17143
GCA_002941665.1ContigPTNN00000000SAMN08534269
YH17144
GCA_002941645.1ScaffoldPTNM00000000SAMN08534270
YH17145
GCA_002941625.1ScaffoldPTNK00000000SAMN08534272
YH17147
GCA_002941605.1ScaffoldPTNJ00000000SAMN08534273
YH17148
GCA_002941585.1ScaffoldPTNI00000000SAMN08534274
YH17149
GCA_002941565.1ContigPTND00000000SAMN08534281
YH17156
GCA_002941545.1ScaffoldPTNG00000000SAMN08534278
YH17153
GCA_002941525.1ScaffoldPTNE00000000SAMN08534280
YH17155
GCA_002941495.1ScaffoldPTNC00000000SAMN08534283
YH17158
GCA_002941485.1ScaffoldPTMY00000000SAMN08534287
YH17162
GCA_002941455.1ScaffoldPTNB00000000SAMN08534284
YH17159
GCA_002941445.1ContigPTMZ00000000SAMN08534286
YH17161
GCA_002941425.1ScaffoldPTMW00000000SAMN08534290
YH17165
GCA_002941405.1ScaffoldPTMU00000000SAMN08534292
YH17167
GCA_002941385.1ScaffoldPTMX00000000SAMN08534289
YH17164
GCA_002941365.1ScaffoldPTMQ00000000SAMN08534296
YH17172
GCA_002941345.1ContigPTMR00000000SAMN08534295
YH17171
GCA_002941325.1ScaffoldPTMP00000000SAMN08534297
YH17173
GCA_002941305.1ScaffoldPTMN00000000SAMN08534299
YH17176
GCA_002941285.1ScaffoldPTMM00000000SAMN08534300
YH17177
GCA_002941265.1ScaffoldPTMK00000000SAMN08534302
YH17179
GCA_002941245.1ScaffoldPTMI00000000SAMN08534304
YH17181
GCA_002941225.1ScaffoldPTML00000000SAMN08534301
YH17178
GCA_002941205.1ContigPTMF00000000SAMN08534307
YH17187
GCA_002941185.1ScaffoldPTME00000000SAMN08534308
YH17188
GCA_002941165.1ScaffoldPTMG00000000SAMN08534306
YH17186
GCA_002941115.1ContigPTMD00000000SAMN08534309
YH17190
GCA_002951495.1ContigPUBY00000000SAMN08534257
YH17130
GCA_002951525.1ContigPUBX00000000SAMN08534259
YH17132
GCA_002941095.1ContigPTMB00000000SAMN08534311
YH17175
GCA_002967105.1ContigPUGH00000000SAMN08534312
YH17268
GCA_002967155.1ContigPUGG00000000SAMN08534313
YH17269

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