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Genome Information for Streptomyces venezuelae
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1 additional project is a component of the Lsr2 binding sites and gene expression of wild type and lsr2 mutants of Streptomyces venezuelae during late development in liquid culture.
The goal of this work was to determine where Lsr2 binds within the S. venezuelae chromosome, and to differentiate between direct versus indirect effects by comparing our ChIP-seq results with RNA-seq results
Overall design: S. venezuelae ChIP-seq data, generated using an Illumina MiSeq platform
| Accession | PRJNA475288; GEO: GSE115538 |
| Data Type | Epigenomics |
| Scope | Multiisolate |
| Organism | Streptomyces venezuelae[Taxonomy ID: 54571] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces venezuelae |
| Publications | Gehrke EJ et al., "Silencing cryptic specialized metabolism in Streptomyces by the nucleoid-associated protein Lsr2.", Elife, 2019 Jun 19;8 |
| Submission | Registration date: 8-Jun-2018
McMaster University |
| Relevance | Environmental |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 4 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 4 |
| GEO DataSets | 1 |