ID 496682 - BioProject

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Accession: PRJEB26143 ID: 496682

EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Indian Ocean - MP0900 metagenome (marine metagenome) data set.

The marine metagenome Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set: PRJNA330081. This project includes samples from the following biomes: Environmental, Aquatic, Marine.

Accession	PRJEB26143
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 16-Oct-2018 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	54
WGS master	10
Publications
PubMed	1
PMC	1
Other datasets
BioSample	10
Assembly	9

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

9
9

Assembly	WGS	BioSample	Taxonomy
GCA_950069765.1	CATMKJ000000000	SAMEA112957926	Marinovum algicola
GCA_950064145.1	CATMBA000000000	SAMEA112957924	uncultured Halomonas sp.
GCA_950061115.1	CATLVP000000000	SAMEA112957925	uncultured Pelagibacteraceae bacterium
GCA_950063675.1	CATMAE000000000	SAMEA112957929	uncultured Pseudoalteromonas sp.
GCA_950058495.1	CATLRA000000000	SAMEA112957923	uncultured Pseudoalteromonas sp.
GCA_950059155.1	CATLUN000000000	SAMEA112957931	uncultured Pseudomonadaceae bacterium
GCA_950073115.1	CATMQA000000000	SAMEA112957930	uncultured Rhodococcus sp.
GCA_950073085.1	CATMQI000000000	SAMEA112957927	uncultured Sulfitobacter sp.
GCA_950059405.1	CATLRK000000000	SAMEA112957928	uncultured archaeon

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EMG produced TPA metagenomics assembly of the Marine microbial communities from the Deep Indian Ocean - MP0900 metagenome (marine metagenome) data set.

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