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Accession: PRJNA505131 ID: 505131

Campylobacter jejuni

Routine Sequencing of Campylobacter species

See Genome Information for Campylobacter jejuni
Routine Sequencing of Campylobacter species
AccessionPRJNA505131
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismCampylobacter jejuni[Taxonomy ID: 197]
Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter jejuni
SubmissionRegistration date: 7-May-2019
Public Health England
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)9355
SRA Experiments9761
Other datasets
BioSample9761
Assembly9355
Assembly details:
Assembly levelNumber of Assemblies
9354
9354
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_031090645.1ContigABLYAE000000000SAMN30987981
1638568
GCA_031088905.1ContigABLXWZ000000000SAMN30987492
1634627
GCA_007900925.2ContigAAJDLC000000000SAMN12418000
720684
GCA_015141555.1ContigAAWXHF000000000SAMN16363634
195675
GCA_015141495.1ContigAAWXHA000000000SAMN16363652
212937
GCA_015141435.1ContigAAWXGN000000000SAMN16363658
190694
GCA_015142225.1ContigAAWXIL000000000SAMN16363657
190687
GCA_015142035.1ContigAAWXHS000000000SAMN16363672
208839
GCA_015141955.1ContigAAWXHZ000000000SAMN16363620
223621
GCA_015140755.1ContigAAWXFP000000000SAMN16363655
208845
GCA_015140655.1ContigAAWXEX000000000SAMN16363688
223623
GCA_015140595.1ContigAAWXFE000000000SAMN16363661
190683
GCA_015140835.1ContigAAWXFW000000000SAMN16363624
285727
GCA_012407965.1ContigAASKUX000000000SAMN14602575
816412
GCA_012407945.1ContigAASKUW000000000SAMN14602599
816415
GCA_012408225.1ContigAASKUY000000000SAMN14602611
816407
GCA_012406535.1ContigAASKRP000000000SAMN14602586
816414
GCA_014344455.1ContigAAVPUX000000000SAMN13353969
839955
GCA_014345595.1ContigAAVPWE000000000SAMN13326918
89871
GCA_014345535.1ContigAAVPWF000000000SAMN13327081
322459
GCA_014121045.1ContigAAVILS000000000SAMN15756223
352697
GCA_014121105.1ContigAAVILU000000000SAMN15756183
349333
GCA_014121085.1ContigAAVILT000000000SAMN15756217
379455
GCA_014120945.1ContigAAVILH000000000SAMN15756207
355086
GCA_014120895.1ContigAAVILG000000000SAMN15756214
574325
GCA_014120865.1ContigAAVILF000000000SAMN15756213
659435
GCA_014120825.1ContigAAVILC000000000SAMN15756224
683206
GCA_014120785.1ContigAAVILK000000000SAMN15756221
639770
GCA_014120725.1ContigAAVIKN000000000SAMN15756229
574327
GCA_014120565.1ContigAAVILY000000000SAMN15756174
349334
GCA_014122845.1ContigAAVINH000000000SAMN15756177
654034
GCA_014122705.1ContigAAVIMY000000000SAMN15756154
641361
GCA_014122645.1ContigAAVIMU000000000SAMN15756162
654039
GCA_014122425.1ContigAAVIMR000000000SAMN15756172
639771
GCA_014122925.1ContigAAVINO000000000SAMN15756146
683204
GCA_014174995.1ContigAAVKHB000000000SAMN15783922
654036
GCA_014174925.1ContigAAVKGZ000000000SAMN15783921
764397
GCA_010006945.1ContigAANBYT000000000SAMN12568240
421722
GCA_010006865.1ContigAANBYH000000000SAMN12567874
411572
GCA_010006845.1ContigAANBYK000000000SAMN12567893
435571
GCA_010007665.1ContigAANCAB000000000SAMN12597977
346951
GCA_010268135.1ContigAANIFM000000000SAMN13378994
839953
GCA_010268835.1ContigAANIGS000000000SAMN13493498
845750
GCA_010267965.1ContigAANIEV000000000SAMN13268919
85704
GCA_010266175.1ContigAANIBN000000000SAMN13378998
839956
GCA_010265975.1ContigAANIAX000000000SAMN13348323
839257
GCA_010265875.1ContigAANIAY000000000SAMN13326933
304402
GCA_010265735.1ContigAANIAT000000000SAMN13268846
274200
GCA_010265555.1ContigAANIAG000000000SAMN13268929
304399
GCA_010265515.1ContigAANIAM000000000SAMN13268936
85712
GCA_010265475.1ContigAANIAD000000000SAMN13268859
142502
GCA_010265395.1ContigAANIAI000000000SAMN13326899
91274
GCA_010265415.1ContigAANIAF000000000SAMN13268960
274206
GCA_010265365.1ContigAANIAK000000000SAMN13268955
135012
GCA_010273855.1ContigAANIQG000000000SAMN13874436
869049
GCA_010272055.1ContigAANIOO000000000SAMN13748754
865127
GCA_010271875.1ContigAANIMI000000000SAMN13748734
865124
GCA_010271055.1ContigAANIKV000000000SAMN13713665
863463
GCA_010270215.1ContigAANIJN000000000SAMN13615911
854855
GCA_010265635.1ContigAANIAO000000000SAMN13326901
285951
GCA_010218435.1ContigAANHHP000000000SAMN13869810
867617
GCA_010218015.1ContigAANHCW000000000SAMN13492716
846544
GCA_010216855.1ContigAANHEM000000000SAMN13658947
857230
GCA_010216135.1ContigAANHCV000000000SAMN13492715
845751
GCA_010216015.1ContigAANHEC000000000SAMN13492718
845746
GCA_010215675.1ContigAANHBV000000000SAMN13492707
845748
GCA_010267135.1ContigAANIFI000000000SAMN13268917
170427
GCA_010267035.1ContigAANIEY000000000SAMN13268829
106505
GCA_010267015.1ContigAANIEZ000000000SAMN13268930
286696
GCA_010199725.1ContigAANGFI000000000SAMN12568151
410032
GCA_010207105.1ContigAANGTH000000000SAMN12590442
371872
GCA_010199645.1ContigAANGEU000000000SAMN12567879
421215
GCA_010199625.1ContigAANGFA000000000SAMN12568165
416249
GCA_010214875.1ContigAANHAS000000000SAMN13380436
841945
GCA_010214035.1ContigAANGZC000000000SAMN13268825
120594
GCA_010213155.1ContigAANGXS000000000SAMN13353968
839958
GCA_010212455.1ContigAANGWJ000000000SAMN13326909
91238
GCA_010212355.1ContigAANGWC000000000SAMN13268827
91202
GCA_010206605.1ContigAANGRH000000000SAMN12594089
364608
GCA_010206585.1ContigAANGRD000000000SAMN12593916
371847
GCA_010206565.1ContigAANGRM000000000SAMN12597852
354060
GCA_010206545.1ContigAANGRA000000000SAMN12590739
379311
GCA_010206525.1ContigAANGRK000000000SAMN12597834
346950
GCA_010206505.1ContigAANGSX000000000SAMN13253842
833325
GCA_010206485.1ContigAANGRF000000000SAMN12594182
349342
GCA_010206465.1ContigAANGRN000000000SAMN12597743
337672
GCA_010206445.1ContigAANGRE000000000SAMN12597694
353973
GCA_010206395.1ContigAANGQZ000000000SAMN12590893
356610
GCA_010206105.1ContigAANGOE000000000SAMN12590732
374634
GCA_010206125.1ContigAANGQW000000000SAMN12597766
337690
GCA_010205985.1ContigAANGQU000000000SAMN12597713
348802
GCA_010205995.1ContigAANGQS000000000SAMN12594228
355166
GCA_010205905.1ContigAANGQM000000000SAMN12594175
355162
GCA_010205865.1ContigAANGQL000000000SAMN12594121
355087
GCA_010205815.1ContigAANGQK000000000SAMN12594050
349338
GCA_010205725.1ContigAANGQG000000000SAMN12593932
352673
GCA_010205735.1ContigAANGQB000000000SAMN12590895
370676
GCA_010205475.1ContigAANGQC000000000SAMN12590898
371975
GCA_010205325.1ContigAANGPC000000000SAMN12597952
353940
GCA_010205285.1ContigAANGPB000000000SAMN12597947
348818
GCA_010205265.1ContigAANGOW000000000SAMN12597975
338506
GCA_010205225.1ContigAANGOU000000000SAMN12597806
346966
GCA_010205205.1ContigAANGPA000000000SAMN12597873
349313
GCA_010205145.1ContigAANGOX000000000SAMN12597878
346923
GCA_010205185.1ContigAANGOZ000000000SAMN12597782
341300
GCA_010205165.1ContigAANGOT000000000SAMN12597748
346929
GCA_010205105.1ContigAANGOS000000000SAMN12594229
353939
GCA_010205085.1ContigAANGPW000000000SAMN12590702
361753
GCA_010205045.1ContigAANGOY000000000SAMN12597757
349332
GCA_010205065.1ContigAANGOR000000000SAMN12594170
356178
GCA_010205025.1ContigAANGOO000000000SAMN12594135
356136
GCA_010205005.1ContigAANGOP000000000SAMN12594148
355076
GCA_010204955.1ContigAANGOQ000000000SAMN12594234
349347
GCA_010204985.1ContigAANGOM000000000SAMN12594180
349328
GCA_010204945.1ContigAANGON000000000SAMN12594008
356573
GCA_010204925.1ContigAANGOK000000000SAMN12593924
353968
GCA_010204905.1ContigAANGOL000000000SAMN12594055
348823
GCA_010204865.1ContigAANGOI000000000SAMN12593974
364217
GCA_010204845.1ContigAANGOH000000000SAMN12593901
352725
GCA_010204805.1ContigAANGOB000000000SAMN12590862
370682
GCA_010204765.1ContigAANGOJ000000000SAMN12593909
349366
GCA_010204745.1ContigAANGOF000000000SAMN12590370
372756
GCA_010204725.1ContigAANGPY000000000SAMN12590833
372742
GCA_010204705.1ContigAANGOG000000000SAMN12590856
358456
GCA_010204625.1ContigAANGOC000000000SAMN12590710
391216
GCA_010204585.1ContigAANGNY000000000SAMN12590306
370036
GCA_010204565.1ContigAANGOA000000000SAMN12590869
360421
GCA_010204545.1ContigAANGNZ000000000SAMN12590382
371853
GCA_010204525.1ContigAANGNV000000000SAMN12597862
353947
GCA_010204505.1ContigAANGNN000000000SAMN12597851
336923
GCA_010204485.1ContigAANGNW000000000SAMN12597955
352724
GCA_010204465.1ContigAANGNU000000000SAMN13208421
828953
GCA_010204445.1ContigAANGNG000000000SAMN12597779
338459
GCA_010204405.1ContigAANGNR000000000SAMN12597870
338487
GCA_010204385.1ContigAANGNA000000000SAMN12597727
336931
GCA_010204365.1ContigAANGNP000000000SAMN12597935
336933
GCA_010204345.1ContigAANGNB000000000SAMN12597759
352748
GCA_010204325.1ContigAANGMY000000000SAMN12594224
349356
GCA_010204285.1ContigAANGML000000000SAMN12594168
356558
GCA_010204265.1ContigAANGMR000000000SAMN12594242
354052
GCA_010204245.1ContigAANGMU000000000SAMN12597703
337667
GCA_010204225.1ContigAANGNS000000000SAMN12590380
370892
GCA_010204165.1ContigAANGLK000000000SAMN12590429
370672
GCA_010204125.1ContigAANGLI000000000SAMN12590340
788285
GCA_010204145.1ContigAANGLJ000000000SAMN12590397
371859
GCA_010204105.1ContigAANGNM000000000SAMN12597811
346940
GCA_010204075.1ContigAANGLM000000000SAMN12590319
364594
GCA_010204025.1ContigAANGNO000000000SAMN12597818
338510
GCA_010203905.1ContigAANGMZ000000000SAMN12597706
346965
GCA_010203865.1ContigAANGMP000000000SAMN12594183
349307
GCA_010203845.1ContigAANGMM000000000SAMN12594131
352709
GCA_010203825.1ContigAANGMO000000000SAMN12594020
355168
GCA_010203805.1ContigAANGMN000000000SAMN12594161
354053
GCA_010203775.1ContigAANGMQ000000000SAMN12594098
360413
GCA_010203725.1ContigAANGMV000000000SAMN12594233
355080
GCA_010203705.1ContigAANGMW000000000SAMN12594227
355082
GCA_010203685.1ContigAANGMS000000000SAMN12594174
353962
GCA_010203665.1ContigAANGMI000000000SAMN12594077
390030
GCA_010203645.1ContigAANGMK000000000SAMN12594125
352742
GCA_010203625.1ContigAANGNH000000000SAMN12590334
370890
GCA_010203585.1ContigAANGMH000000000SAMN12594040
349308
GCA_010203605.1ContigAANGMJ000000000SAMN12594017
356555
GCA_010203565.1ContigAANGMF000000000SAMN12594032
356197
GCA_010203545.1ContigAANGMC000000000SAMN12593927
349359
GCA_010203505.1ContigAANGNT000000000SAMN12597864
356138
GCA_010203485.1ContigAANGMG000000000SAMN12593975
372731
GCA_010203445.1ContigAANGME000000000SAMN12593926
356577
GCA_010203455.1ContigAANGLZ000000000SAMN12590908
387269
GCA_010203425.1ContigAANGMA000000000SAMN12593907
354057
GCA_010203405.1ContigAANGNL000000000SAMN12590304
368994
GCA_010203385.1ContigAANGMB000000000SAMN12593917
349323
GCA_010203365.1ContigAANGNQ000000000SAMN12597835
338476
GCA_010203345.1ContigAANGMD000000000SAMN12590870
373808
GCA_010203325.1ContigAANGNK000000000SAMN12597813
338461
GCA_010203305.1ContigAANGLW000000000SAMN12590714
394955
GCA_010203285.1ContigAANGLX000000000SAMN12590874
363631
GCA_010203265.1ContigAANGLV000000000SAMN12590890
364218
GCA_010203245.1ContigAANGLT000000000SAMN12590831
364633
GCA_010203225.1ContigAANGLY000000000SAMN12590845
360395
GCA_010203205.1ContigAANGLS000000000SAMN12590854
364221
GCA_010203185.1ContigAANGLU000000000SAMN12590769
371876
GCA_010203165.1ContigAANGLN000000000SAMN12590737
378658
GCA_010203145.1ContigAANGLR000000000SAMN12590767
360402
GCA_010203125.1ContigAANGLP000000000SAMN12590782
364618
GCA_010203105.1ContigAANGNF000000000SAMN12597770
338491
GCA_010203085.1ContigAANGNJ000000000SAMN12597792
338507
GCA_010203065.1ContigAANGLQ000000000SAMN12590916
360428
GCA_010203045.1ContigAANGLH000000000SAMN12590423
356591
GCA_010203025.1ContigAANGLO000000000SAMN12590717
370889
GCA_010202925.1ContigAANGKX000000000SAMN12585158
401666
GCA_010202885.1ContigAANGKS000000000SAMN12585194
785051
GCA_010202855.1ContigAANGKO000000000SAMN12585512
411574
GCA_010202825.1ContigAANGKU000000000SAMN12585462
376265
GCA_010202795.1ContigAANGKT000000000SAMN12585430
787295
GCA_010202785.1ContigAANGKR000000000SAMN12585495
376267
GCA_010202765.1ContigAANGKM000000000SAMN12585394
394029
GCA_010202745.1ContigAANGKN000000000SAMN12585409
391159
GCA_010202705.1ContigAANGKL000000000SAMN12585335
786703
GCA_010202725.1ContigAANGKP000000000SAMN12585392
405984
GCA_010202685.1ContigAANGKB000000000SAMN12585314
374080
GCA_010202655.1ContigAANGKA000000000SAMN12585376
374013
GCA_010202625.1ContigAANGKK000000000SAMN12585390
399415
GCA_010202605.1ContigAANGKC000000000SAMN12585310
785050
GCA_010202585.1ContigAANGKD000000000SAMN12585326
385017
GCA_010202565.1ContigAANGKJ000000000SAMN12585317
374638
GCA_010202545.1ContigAANGKI000000000SAMN12585408
404778
GCA_010202525.1ContigAANGKG000000000SAMN12585269
405990
GCA_010202505.1ContigAANGKH000000000SAMN12585308
373938
GCA_010202485.1ContigAANGKE000000000SAMN12585309
385542
GCA_010202445.1ContigAANGJW000000000SAMN12574180
401665
GCA_010202415.1ContigAANGJX000000000SAMN12585210
379459
GCA_010202405.1ContigAANGJZ000000000SAMN12585255
405975
GCA_010202385.1ContigAANGJT000000000SAMN12585298
379367
GCA_010202365.1ContigAANGKF000000000SAMN12585306
374636
GCA_010202335.1ContigAANGJP000000000SAMN12585167
785049
GCA_010202325.1ContigAANGJY000000000SAMN12585208
385021
GCA_010202295.1ContigAANGJS000000000SAMN12585162
397446
GCA_010202245.1ContigAANGJR000000000SAMN12585147
404779
GCA_010202275.1ContigAANGJU000000000SAMN12585180
387232
GCA_010202205.1ContigAANGJK000000000SAMN12574127
397445
GCA_010202185.1ContigAANGJL000000000SAMN12574192
419153
GCA_010202165.1ContigAANGJD000000000SAMN12574147
401817
GCA_010202145.1ContigAANGJM000000000SAMN12574178
391249
GCA_010202105.1ContigAANGJN000000000SAMN12574194
411576
GCA_010202075.1ContigAANGJC000000000SAMN12574196
394967
GCA_010202065.1ContigAANGJO000000000SAMN12574133
391242
GCA_010202045.1ContigAANGJA000000000SAMN12574183
399524
GCA_010202025.1ContigAANGJH000000000SAMN12574134
390099
GCA_010202005.1ContigAANGIZ000000000SAMN12574135
394961
GCA_010201985.1ContigAANGJF000000000SAMN12573907
399414
GCA_010201965.1ContigAANGJE000000000SAMN12573827
397455
GCA_010201945.1ContigAANGJG000000000SAMN12573994
399522
GCA_010201885.1ContigAANGIR000000000SAMN12573822
391805
GCA_010201865.1ContigAANGIV000000000SAMN12573807
391806
GCA_010201875.1ContigAANGIS000000000SAMN12573957
408223
GCA_010201825.1ContigAANGIY000000000SAMN12573928
391245
GCA_010201835.1ContigAANGIU000000000SAMN12573894
405972
GCA_010201805.1ContigAANGIJ000000000SAMN12573795
399409
GCA_010201785.1ContigAANGJB000000000SAMN12573912
391345
GCA_010201755.1ContigAANGIQ000000000SAMN12573892
391222
GCA_010201735.1ContigAANGIX000000000SAMN12573769
429198
GCA_010201725.1ContigAANGIW000000000SAMN12573790
391343
GCA_010201605.1ContigAANGIO000000000SAMN12573766
419091
GCA_010201645.1ContigAANGIT000000000SAMN12573811
391218
GCA_010201405.1ContigAANGJQ000000000SAMN12585156
391229
GCA_010201315.1ContigAANGJV000000000SAMN12585144
418930
GCA_010201185.1ContigAANGGN000000000SAMN12568141
410011
GCA_010201165.1ContigAANGGL000000000SAMN12568298
428098
GCA_010201125.1ContigAANGGG000000000SAMN12568283
408845
GCA_010201105.1ContigAANGHS000000000SAMN12574156
391809
GCA_010201045.1ContigAANGHN000000000SAMN12574202
399426
GCA_010201005.1ContigAANGHM000000000SAMN12573830
391808
GCA_010200965.1ContigAANGHO000000000SAMN12574184
402814
GCA_010200825.1ContigAANGGS000000000SAMN12568150
419149
GCA_010200785.1ContigAANGGT000000000SAMN12568048
418939
GCA_010200725.1ContigAANGFF000000000SAMN12568237
419147
GCA_010200685.1ContigAANGFT000000000SAMN12568079
432235
GCA_010200665.1ContigAANGGC000000000SAMN12568266
436988
GCA_010200645.1ContigAANGHG000000000SAMN12573945
397452
GCA_010200595.1ContigAANGFN000000000SAMN12567938
419088
GCA_010200585.1ContigAANGFO000000000SAMN12567905
440951
GCA_010200565.1ContigAANGFU000000000SAMN12568119
421717
GCA_010200525.1ContigAANGFS000000000SAMN12568160
408898
GCA_010200545.1ContigAANGFX000000000SAMN12568133
408865
GCA_010200505.1ContigAANGFM000000000SAMN12568232
427374
GCA_010200485.1ContigAANGFP000000000SAMN12567959
419037
GCA_010200465.1ContigAANGFH000000000SAMN12567909
422455
GCA_010200445.1ContigAANGGD000000000SAMN12568198
420686
GCA_010200425.1ContigAANGFL000000000SAMN12568186
408887
GCA_010200405.1ContigAANGGE000000000SAMN12568209
410020
GCA_010200365.1ContigAANGFE000000000SAMN12568300
408853
GCA_010200385.1ContigAANGFG000000000SAMN12567980
440953
GCA_010200325.1ContigAANGHB000000000SAMN12573802
419093
GCA_010200305.1ContigAANGFK000000000SAMN12568272
441503
GCA_010200245.1ContigAANGFQ000000000SAMN12567929
408852
GCA_010200225.1ContigAANGFD000000000SAMN12568253
419148
GCA_010200205.1ContigAANGFC000000000SAMN12567876
419038
GCA_010200045.1ContigAANGGO000000000SAMN12568325
408871
GCA_010200025.1ContigAANGGJ000000000SAMN12568311
420705
GCA_010199945.1ContigAANGGI000000000SAMN12568291
408876
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GCA_011724855.1ContigAAQTPS000000000SAMN14418060
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GCA_011724835.1ContigAAQTPP000000000SAMN14418281
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GCA_012041545.1ContigAARMGC000000000SAMN14534942
914825
GCA_012042195.1ContigAARMHO000000000SAMN14534944
914851
GCA_010978615.1ContigAAPDTW000000000SAMN14126928
888096
GCA_010978875.1ContigAAPDUA000000000SAMN14126932
888077
GCA_011006715.1ContigAAPEKC000000000SAMN14126948
886630
GCA_011008435.1ContigAAPEOJ000000000SAMN14126950
886607
GCA_011000255.1ContigAAPELM000000000SAMN14126929
886625
GCA_010999975.1ContigAAPELK000000000SAMN14127696
886649
GCA_011070015.1ContigAAPEUF000000000SAMN14113718
880042
GCA_011069735.1ContigAAPETG000000000SAMN14113704
886726
GCA_011069195.1ContigAAPETZ000000000SAMN14113708
879982
GCA_011069235.1ContigAAPEUA000000000SAMN14113711
880012
GCA_011069155.1ContigAAPETW000000000SAMN14113698
882902
GCA_011069035.1ContigAAPETN000000000SAMN14113710
880007
GCA_011069015.1ContigAAPETO000000000SAMN14113709
882830
GCA_011068975.1ContigAAPEUO000000000SAMN14113713
879995
GCA_011068955.1ContigAAPEUH000000000SAMN14113712
886724
GCA_011068855.1ContigAAPEVA000000000SAMN14113752
886723
GCA_011068535.1ContigAAPETI000000000SAMN14113685
879987
GCA_011068515.1ContigAAPETH000000000SAMN14113686
886725
GCA_011068495.1ContigAAPETL000000000SAMN14113702
880001
GCA_011068755.1ContigAAPEUC000000000SAMN14113734
886727
GCA_011068715.1ContigAAPETX000000000SAMN14113717
880057
GCA_011068695.1ContigAAPEUB000000000SAMN14113726
886731
GCA_011068675.1ContigAAPETY000000000SAMN14113699
886722
GCA_011068655.1ContigAAPETM000000000SAMN14113715
886730
GCA_011068635.1ContigAAPEUM000000000SAMN14113732
886729
GCA_011068615.1ContigAAPETS000000000SAMN14113714
880069
GCA_011068595.1ContigAAPETP000000000SAMN14113725
886733
GCA_011068575.1ContigAAPETJ000000000SAMN14113706
886728
SRA Data Details
ParameterValue
Data volume, Gbases3,846
Data volume, Tbytes1.73

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