Bacteroides ovatus (ID 518912) - BioProject

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Accession: PRJNA518912 ID: 518912

Bacteroides ovatus

Characterization of fecal IgA levels of several commensal Bacteroides ovatus strains

Multiple strains of Bacteroides ovatus were isolated and sequenced, and tested for fecal IgA levels in gnotobiotic mice.

Accession	PRJNA518912
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 1-Feb-2019 Icahn School of Medicine at Mount Sinai
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	4571
WGS master	62
SRA Experiments	151
Other datasets
BioSample	230
Assembly	62

Assembly details:

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Assembly level

Number of Assemblies

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Total

62
62

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_005844305.1	SPFX00000000	SAMN10863265	1001271st1_F12	Agathobacter rectalis
GCA_005844225.1	SPHG00000000	SAMN10863270	BSD2780061688st1_A10	Alistipes shahii
GCA_005844425.1	SPHL00000000	SAMN10863256	1001271st1_D3	Anaerofustis stercorihominis
GCA_005844255.1	SPHI00000000	SAMN10863268	BSD2780061689st1_A4	Bacteroides caccae
GCA_005845315.1	SPHC00000000	SAMN10863234	1001175st1_B5	Bacteroides eggerthii
GCA_005844775.1	SPHU00000000	SAMN10863237	1001175st1_E5	Bacteroides faecis
GCA_005844845.1	SPGY00000000	SAMN10863232	1001175st1_C3	Bacteroides fragilis
GCA_005844795.1	SPGP00000000	SAMN10863235	1001175st1_A4	Bacteroides intestinalis
GCA_005844965.1	SPGX00000000	SAMN10863214	BSD2780120875st1_E1	Bacteroides ovatus
GCA_005844955.1	SPGW00000000	SAMN10863220	1001099st1_E5	Bacteroides ovatus
GCA_005844935.1	SPGV00000000	SAMN10863221	1001275st2_G11	Bacteroides ovatus
GCA_005844895.1	SPGU00000000	SAMN10863225	1001136st1_E5	Bacteroides ovatus
GCA_005844905.1	SPGR00000000	SAMN10863226	1001271st1_H2	Bacteroides ovatus
GCA_005844885.1	SPGZ00000000	SAMN10863229	BSD2780061687st1_H2	Bacteroides ovatus
GCA_005844865.1	SPGQ00000000	SAMN10863231	BSD2780061688st1_A7	Bacteroides ovatus
GCA_005845145.1	SPFU00000000	SAMN10863271	BSD2780061688st1_C6	Bacteroides ovatus
GCA_005845305.1	SPHA00000000	SAMN10863228	1001175st1_D1	Bacteroides ovatus
GCA_005844755.1	SPHB00000000	SAMN10863236	1001175st1_E11	Bacteroides ovatus
GCA_005844235.1	SPHH00000000	SAMN10863269	BSD2780061689st1_G7	Bacteroides uniformis
GCA_005845245.1	SPHK00000000	SAMN10863257	1001271st1_A10	Bacteroides uniformis
GCA_005844805.1	SPHV00000000	SAMN10863233	1001175st1_F6	Bacteroides uniformis
GCA_005845205.1	SPGC00000000	SAMN10863259	1001271st1_A4	Bifidobacterium adolescentis
GCA_005844245.1	SPFV00000000	SAMN10863267	BSD2780061688st1_E5	Bifidobacterium animalis
GCA_005844365.1	SPGB00000000	SAMN10863260	1001271st1_H11	Bifidobacterium bifidum
GCA_005844205.1	SPFT00000000	SAMN10863272	BSD2780061688st1_G1	Bifidobacterium bifidum
GCA_005844345.1	SPGA00000000	SAMN10863261	1001271st1_B4	Bifidobacterium longum
GCA_005844715.1	SPGO00000000	SAMN10863239	1001175st1_G10	Bifidobacterium longum
GCA_005844115.1	SPFS00000000	SAMN10863273	BSD2780061688st2_H1	Bifidobacterium longum
GCA_005844335.1	SPFZ00000000	SAMN10863262	1001271st1_F3	Bifidobacterium pseudocatenulatum
GCA_005844445.1	SPHE00000000	SAMN10863252	1001175st1_E1	Blautia hansenii
GCA_005845175.1	SPFW00000000	SAMN10863266	1001271st1_E5	Blautia obeum
GCA_005844665.1	SPGM00000000	SAMN10863242	1001175st1_F9	Clostridium perfringens
GCA_005844105.1	SPFQ00000000	SAMN10863278	BSD2780061688st3_G3	Clostridium perfringens
GCA_005845265.1	SPHP00000000	SAMN10863240	1001175st1_A10	Clostridium sp. 1001175st1 A10
GCA_005845215.1	SPHO00000000	SAMN10863263	1001271st1_H5	Clostridium sp. 1001271st1 H5
GCA_005845105.1	SPGS00000000	SAMN10863275	BSD2780061688st1_E8	Clostridium sp. BSD2780061688st1 E8
GCA_005845155.1	SPGT00000000	SAMN10863274	BSD2780061688st1_H5	Clostridium sp. BSD2780061688st1 H5
GCA_005845035.1	SPFO00000000	SAMN10863280	BSD2780061688st1_F5	Collinsella aerofaciens
GCA_005844325.1	SPFY00000000	SAMN10863264	1001271st1_C3	Collinsella aerofaciens
GCA_005845055.1	SPHQ00000000	SAMN10863281	BSD2780061688st1_H8	Collinsella bouchesdurhonensis
GCA_005844655.1	SPHT00000000	SAMN10863243	1001175st1_H1	Dorea longicatena
GCA_005844705.1	SPGN00000000	SAMN10863241	1001175st1_C5	Enterocloster clostridioformis
GCA_005844645.1	SPGL00000000	SAMN10863244	1001175st1_D6	Enterococcus avium
GCA_005845015.1	SPFN00000000	SAMN10863283	BSD2780061688st3_G10	Enterococcus faecalis
GCA_005844995.1	SPFM00000000	SAMN10863284	BSD2780061688st2_C8	Enterococcus faecium
GCA_005844145.1	SPHN00000000	SAMN10863282	BSD2780061688st2_D3	Enterococcus sp. BSD2780061688st2 D3
GCA_005844625.1	SPGK00000000	SAMN10863245	1001175st1_F3	Escherichia coli
GCA_005844575.1	SPGJ00000000	SAMN10863246	1001175st2_F4	Escherichia coli
GCA_005844555.1	SPGI00000000	SAMN10863247	1001175st3_A2	Escherichia coli
GCA_005844565.1	SPHS00000000	SAMN10863248	1001175st1_C9	Flavonifractor plautii
GCA_005845095.1	SPHR00000000	SAMN10863276	BSD2780061688st1_A9	Intestinibacter bartlettii
GCA_005844525.1	SPGH00000000	SAMN10863249	1001175st1_D8	Lactobacillus gasseri
GCA_005844535.1	SPGG00000000	SAMN10863250	1001175st1_A1	Parabacteroides merdae
GCA_005844725.1	SPHD00000000	SAMN10863238	1001175st1_C6	Phocaeicola vulgatus
GCA_005844385.1	SPHJ00000000	SAMN10863258	1001271st1_G7	Phocaeicola vulgatus
GCA_005844125.1	SPHM00000000	SAMN10863285	BSD2780061688st1_E11	Pseudoflavonifractor sp. BSD2780061688st1 E11
GCA_005845255.1	SPHF00000000	SAMN10863251	1001175st1_E3	Roseburia hominis
GCA_005844435.1	SPGD00000000	SAMN10863255	1001175st1_H11	Streptococcus anginosus
GCA_005844455.1	SPGF00000000	SAMN10863253	1001175st1_H6	Streptococcus mitis
GCA_005844475.1	SPGE00000000	SAMN10863254	1001175st1_H3	Streptococcus salivarius
GCA_005844135.1	SPFR00000000	SAMN10863277	BSD2780061688st1_A6	[Clostridium] hylemonae
GCA_005845085.1	SPFP00000000	SAMN10863279	BSD2780061688st1_G6	[Clostridium] symbiosum

SRA Data Details

Parameter	Value
Data volume, Gbases	82
Data volume, Mbytes	34709

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Bacteroides ovatus

Characterization of fecal IgA levels of several commensal Bacteroides ovatus strains

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