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Accession: PRJNA521309 ID: 521309

Draft genome sequencing of bacterial isolates from human milk samples Genome sequencing and assembly

Mining for novel biological antimicrobials from human milk samples
AccessionPRJNA521309
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsAngelopoulou A et al., "Diverse Bacteriocins Produced by Strains From the Human Milk Microbiota.", Front Microbiol, 2020;11:788
SubmissionRegistration date: 7-Feb-2019
University College Cork
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)82
WGS master81
Genomic DNA1
Protein Sequences2334
Publications
PubMed1
PMC1
Other datasets
BioSample82
Assembly82
Assembly details:
Assembly levelNumber of Assemblies
1
81
82
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_009897865.1ContigSHGD00000000
SAMN10929300
APC 3825
GCA_009897725.1ContigSHFW00000000
SAMN10929307
APC 3826
GCA_009897695.1ContigSHFU00000000
SAMN10929309
APC 3827
GCA_009897565.1ContigSHFO00000000
SAMN10929316
APC 3880
GCA_009897405.1ContigSHFG00000000
SAMN10929325
APC 3828
GCA_009896765.1ContigSHDZ00000000
SAMN10929358
APC 3832
GCA_009896725.1ContigSHEB00000000
SAMN10929356
APC 3830
GCA_009896715.1ContigSHDY00000000
SAMN10929359
APC 3833
GCA_009896695.1ContigSHEA00000000
SAMN10929357
APC 3831
GCA_009896685.1ContigSHDX00000000
SAMN10929360
APC 3835
GCA_009896635.1ContigSHDT00000000
SAMN10929364
APC 3836
GCA_009896605.1ContigSHDW00000000
SAMN10929361
APC 3837
GCA_009897645.1ContigSHFR00000000
SAMN10929312
APC 3760
GCA_013345145.1ContigSRMJ00000000
SAMN11338668
APC 3760
GCA_009897575.1ContigSHGS00000000
SAMN10929315
APC 3829
GCA_009896485.1ContigSHDR00000000
SAMN10929366
APC 3815
GCA_009896935.1ContigSHEK00000000
SAMN10929347
APC 3814
GCA_009896865.1ContigSHEG00000000
SAMN10929351
APC 3818
GCA_009896835.1ContigSHED00000000
SAMN10929354
APC 3886
GCA_009896805.1ContigSHEE00000000
SAMN10929353
APC 3885
GCA_009896795.1ContigSHEC00000000
SAMN10929355
APC 3887
GCA_009896785.1ContigSHEF00000000
SAMN10929352
APC 3884
GCA_009896585.1ContigSHDS00000000
SAMN10929365
APC 3820
GCA_009896625.1ContigSHDV00000000
SAMN10929362
APC 3819
GCA_009897845.1ContigSHGC00000000
SAMN10929301
APC 3774
GCA_009897835.1ContigSHFY00000000
SAMN10929305
APC 3823
GCA_009897775.1ContigSHFZ00000000
SAMN10929304
APC 3812
GCA_009897765.1ContigSHFX00000000
SAMN10929306
APC 3816
GCA_009898105.1ContigSHGO00000000
SAMN10929289
APC 3809
GCA_009897485.1ContigSHFM00000000
SAMN10929318
APC 3821
GCA_009897445.1ContigSHFJ00000000
SAMN10929321
APC 3822
GCA_009897545.1ContigSHFN00000000
SAMN10929317
APC 3881
GCA_009897715.1ContigSHFV00000000
SAMN10929308
APC 3813
GCA_009897685.1ContigSHFS00000000
SAMN10929311
APC 3777
GCA_009897655.1ContigSHFT00000000
SAMN10929310
APC 3776
GCA_009897515.1ContigSHFL00000000
SAMN10929319
APC 3780
GCA_009897505.1ContigSHFK00000000
SAMN10929320
APC 3882
GCA_009897435.1ContigSHFH00000000
SAMN10929324
APC 3789
GCA_009897425.1ContigSHGR00000000
SAMN10929322
APC 3787
GCA_009897375.1ContigSHFI00000000
SAMN10929323
APC 3788
GCA_009897365.1ContigSHFF00000000
SAMN10929326
APC 3790
GCA_009897335.1ContigSHFE00000000
SAMN10929327
APC 3791
GCA_009897315.1ContigSHFD00000000
SAMN10929328
APC 3792
GCA_009897305.1ContigSHFB00000000
SAMN10929330
APC 3793
GCA_009898075.1ContigSHGL00000000
SAMN10929292
APC 3770
GCA_009898055.1ContigSHGK00000000
SAMN10929293
APC 3771
GCA_009898025.1ContigSHGN00000000
SAMN10929290
APC 3768
GCA_009898035.1ContigSHGM00000000
SAMN10929291
APC 3769
GCA_009898005.1ContigSHGJ00000000
SAMN10929294
APC 3773
GCA_009897975.1ContigSHGF00000000
SAMN10929298
APC 3763
GCA_009897945.1ContigSHGI00000000
SAMN10929295
APC 3772
GCA_009897935.1ContigSHGG00000000
SAMN10929297
APC 3762
GCA_009897925.1ContigSHGH00000000
SAMN10929296
APC 3761
GCA_009897905.1ContigSHGE00000000
SAMN10929299
APC 3764
GCA_009897805.1ContigSHGA00000000
SAMN10929303
APC 3775
GCA_009897825.1ContigSHGB00000000
SAMN10929302
APC 3810
GCA_009898145.1ContigSHGP00000000
SAMN10929288
APC 3766
GCA_009898115.1ContigSHGQ00000000
SAMN10929287
APC 3785
GCA_009896645.1ContigSHDU00000000
SAMN10929363
APC 3808
GCA_009896905.1ContigSHEJ00000000
SAMN10929348
APC 3783
GCA_009896875.1ContigSHEI00000000
SAMN10929349
APC 3784
GCA_009897625.1ContigSHFQ00000000
SAMN10929313
APC 3778
GCA_009897605.1ContigSHFP00000000
SAMN10929314
APC 3779
GCA_009897265.1ContigSHFA00000000
SAMN10929331
APC 3794
GCA_009897235.1ContigSHEY00000000
SAMN10929333
APC 3781
GCA_009897225.1ContigSHEZ00000000
SAMN10929332
APC 3795
GCA_009897195.1ContigSHEV00000000
SAMN10929336
APC 3798
GCA_009897185.1ContigSHEX00000000
SAMN10929334
APC 3796
GCA_009897165.1ContigSHEW00000000
SAMN10929335
APC 3797
GCA_009897145.1ContigSHEU00000000
SAMN10929337
APC 3883
GCA_009897125.1ContigSHET00000000
SAMN10929338
APC 3799
GCA_009897085.1ContigSHER00000000
SAMN10929340
APC 3801
GCA_009897065.1ContigSHEQ00000000
SAMN10929341
APC 3802
GCA_009897075.1ContigSHES00000000
SAMN10929339
APC 3800
GCA_009897035.1ContigSHEP00000000
SAMN10929342
APC 3803
GCA_009897025.1ContigSHEO00000000
SAMN10929343
APC 3804
GCA_009897005.1ContigSHEN00000000
SAMN10929344
APC 3805
GCA_009896975.1ContigSHEL00000000
SAMN10929346
APC 3806
GCA_009896965.1ContigSHEM00000000
SAMN10929345
APC 3782
GCA_009896915.1ContigSHEH00000000
SAMN10929350
APC 3807
GCA_009897275.1ContigSHFC00000000
SAMN10929329
APC 3824
GCA_009931395.1Complete genomeSAMN11338654
APC 3758

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