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Accession: PRJNA52149 ID: 52149

Klebsiella oxytoca 10-5248

Reference genome for the Human Microbiome Project

See Genome Information for Klebsiella oxytoca
Reference genome for the Human Microbiome Project

Another assembly of this organism was generated independently from the HMP reference genome, using PacBio and Illumina sequence reads.

AccessionPRJNA52149
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismKlebsiella oxytoca 10-5248[Taxonomy ID: 883123]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella; Klebsiella oxytoca; Klebsiella oxytoca 10-5248
PublicationsRibeiro FJ et al., "Finished bacterial genomes from shotgun sequence data.", Genome Res, 2012 Nov;22(11):2270-7
SubmissionRegistration date: 15-Jun-2012
Broad Institute
Locus Tag PrefixHMPREF9692
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)73
WGS master2
SRA Experiments6
Protein Sequences5575
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes23329

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