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Accession: PRJNA540696 ID: 540696

Escherichia coli

UPEC Genome sequencing and assembly

See Genome Information for Escherichia coli
Uropathogenic E. coli isolated from dogs at a veterinary hospital.
AccessionPRJNA540696
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
SubmissionRegistration date: 12-Aug-2021
Texas A&M University, College of Veterinary Medicine and Biomedical Sciences
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)69
Other datasets
BioSample69
Assembly69
Assembly details:
Assembly levelNumber of Assemblies
69
69
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_019586095.1ContigVJVG00000000SAMN12052981
ME2L-19-454
GCA_019586065.1ContigVJVE00000000SAMN12052979
ME2L-19-452
GCA_019587165.1ContigVJVD00000000SAMN12052978
ME2L-19-451
GCA_019586005.1ContigVJVI00000000SAMN12052983
ME2L-19-456
GCA_019585985.1ContigVJVF00000000SAMN12052980
ME2L-19-453
GCA_019585965.1ContigVJVJ00000000SAMN12052984
ME2L-19-457
GCA_019585935.1ContigVJVN00000000SAMN12052988
ME2L-19-461
GCA_019585925.1ContigVJVK00000000SAMN12052985
ME2L-19-458
GCA_019585905.1ContigVJVM00000000SAMN12052987
ME2L-19-460
GCA_019585885.1ContigVJVL00000000SAMN12052986
ME2L-19-459
GCA_019585845.1ContigVJVO00000000SAMN12052989
ME2L-19-462
GCA_019585855.1ContigVJVP00000000SAMN12052990
ME2L-19-463
GCA_019585825.1ContigVJVR00000000SAMN12052992
ME2L-19-465
GCA_019585795.1ContigVJVQ00000000SAMN12052991
ME2L-19-464
GCA_019585765.1ContigVJVS00000000SAMN12052993
ME2L-19-466
GCA_019585715.1ContigVJVT00000000SAMN12052994
ME2L-19-467
GCA_019585705.1ContigVJVU00000000SAMN12052995
ME2L-19-468
GCA_019588225.1ContigVJTF00000000SAMN12052928
ME2L-19-401
GCA_019588245.1ContigVJTE00000000SAMN12052927
ME2L-19-400
GCA_019588205.1ContigVJTG00000000SAMN12052929
ME2L-19-402
GCA_019588185.1ContigVJTI00000000SAMN12052931
ME2L-19-404
GCA_019588155.1ContigVJTH00000000SAMN12052930
ME2L-19-403
GCA_019588145.1ContigVJTJ00000000SAMN12052932
ME2L-19-405
GCA_019588125.1ContigVJTK00000000SAMN12052933
ME2L-19-406
GCA_019588105.1ContigVJTM00000000SAMN12052935
ME2L-19-408
GCA_019588085.1ContigVJTL00000000SAMN12052934
ME2L-19-407
GCA_019588055.1ContigVJTO00000000SAMN12052937
ME2L-19-410
GCA_019588045.1ContigVJTN00000000SAMN12052936
ME2L-19-409
GCA_019588025.1ContigVJTP00000000SAMN12052938
ME2L-19-411
GCA_019587995.1ContigVJTT00000000SAMN12052942
ME2L-19-415
GCA_019587985.1ContigVJTQ00000000SAMN12052939
ME2L-19-412
GCA_019587965.1ContigVJTR00000000SAMN12052940
ME2L-19-413
GCA_019587945.1ContigVJTS00000000SAMN12052941
ME2L-19-414
GCA_019587925.1ContigVJTU00000000SAMN12052943
ME2L-19-416
GCA_019587895.1ContigVJTV00000000SAMN12052944
ME2L-19-417
GCA_019587885.1ContigVJTW00000000SAMN12052945
ME2L-19-418
GCA_019587865.1ContigVJTY00000000SAMN12052947
ME2L-19-420
GCA_019587845.1ContigVJTX00000000SAMN12052946
ME2L-19-419
GCA_019587825.1ContigVJTZ00000000SAMN12052948
ME2L-19-421
GCA_019587785.1ContigVJUB00000000SAMN12052950
ME2L-19-423
GCA_019587795.1ContigVJUA00000000SAMN12052949
ME2L-19-422
GCA_019587755.1ContigVJUC00000000SAMN12052951
ME2L-19-424
GCA_019587745.1ContigVJUD00000000SAMN12052952
ME2L-19-425
GCA_019587705.1ContigVJUG00000000SAMN12052955
ME2L-19-428
GCA_019587685.1ContigVJUE00000000SAMN12052953
ME2L-19-426
GCA_019587695.1ContigVJUF00000000SAMN12052954
ME2L-19-427
GCA_019587665.1ContigVJUI00000000SAMN12052957
ME2L-19-430
GCA_019587645.1ContigVJUH00000000SAMN12052956
ME2L-19-429
GCA_019587625.1ContigVJUJ00000000SAMN12052958
ME2L-19-431
GCA_019587605.1ContigVJUK00000000SAMN12052959
ME2L-19-432
GCA_019587585.1ContigVJUL00000000SAMN12052960
ME2L-19-433
GCA_019587555.1ContigVJUN00000000SAMN12052962
ME2L-19-435
GCA_019587545.1ContigVJUM00000000SAMN12052961
ME2L-19-434
GCA_019587525.1ContigVJUO00000000SAMN12052963
ME2L-19-436
GCA_019587505.1ContigVJUP00000000SAMN12052964
ME2L-19-437
GCA_019587485.1ContigVJUR00000000SAMN12052966
ME2L-19-439
GCA_019587455.1ContigVJUT00000000SAMN12052968
ME2L-19-441
GCA_019587445.1ContigVJUQ00000000SAMN12052965
ME2L-19-438
GCA_019587425.1ContigVJUS00000000SAMN12052967
ME2L-19-440
GCA_019587405.1ContigVJUU00000000SAMN12052969
ME2L-19-442
GCA_019587385.1ContigVJUV00000000SAMN12052970
ME2L-19-443
GCA_019587365.1ContigVJUY00000000SAMN12052973
ME2L-19-446
GCA_019587325.1ContigVJUW00000000SAMN12052971
ME2L-19-444
GCA_019587335.1ContigVJUX00000000SAMN12052972
ME2L-19-445
GCA_019587305.1ContigVJUZ00000000SAMN12052974
ME2L-19-447
GCA_019587285.1ContigVJVA00000000SAMN12052975
ME2L-19-448
GCA_019587265.1ContigVJVB00000000SAMN12052976
ME2L-19-449
GCA_019587235.1ContigVJVC00000000SAMN12052977
ME2L-19-450
GCA_019587225.1ContigVJVH00000000SAMN12052982
ME2L-19-455

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    Escherichia coli
    UPEC Genome sequencing and assembly
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