WGS of Shigella spp and EIEC isolates from IBESS (ID 551849) - BioProject

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Accession: PRJEB32617 ID: 551849

WGS of Shigella spp and EIEC isolates from IBESS

WGS of Shigella spp and EIEC isolates from a cross-sectional study in the Netherlands, collected during 2016 and 2017.

During 2016 and 2017, a cross-sectional study in the Netherlands was conducted with the aim to assess incidence, population structure, disease outcomes and impact on public health of Shigella spp and EIEC. More...

Accession	PRJEB32617
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Submission	Registration date: 30-Jun-2019 RIVM - National Institute for Public Health and the Environment

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	177278
WGS master	348
SRA Experiments	355
Other datasets
BioSample	355
Assembly	348

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

348
348

Assembly	WGS	BioSample	Taxonomy
GCA_902501975.1	CABVWE000000000	SAMEA5615281	Escherichia coli
GCA_902501915.1	CABVWA000000000	SAMEA5615310	Escherichia coli
GCA_902501805.1	CABVVM000000000	SAMEA5615549	Escherichia coli
GCA_902501855.1	CABVVV000000000	SAMEA5615542	Escherichia coli
GCA_902501765.1	CABVVJ000000000	SAMEA5615373	Escherichia coli
GCA_902501735.1	CABVVI000000000	SAMEA5614340	Escherichia coli
GCA_902501725.1	CABVVF000000000	SAMEA5615443	Escherichia coli
GCA_902502205.1	CABVXB000000000	SAMEA5615321	Escherichia coli
GCA_902502175.1	CABVWW000000000	SAMEA5614287	Escherichia coli
GCA_902502135.1	CABVWV000000000	SAMEA5615323	Escherichia coli
GCA_902502105.1	CABVWT000000000	SAMEA5615423	Escherichia coli
GCA_902502115.1	CABVWR000000000	SAMEA5615478	Escherichia coli
GCA_902502025.1	CABVWH000000000	SAMEA5615692	Escherichia coli
GCA_902501465.1	CABVUJ000000000	SAMEA5615522	Escherichia coli
GCA_902501575.1	CABVUN000000000	SAMEA5615272	Escherichia coli
GCA_902504065.1	CABWDY000000000	SAMEA5615683	Escherichia coli
GCA_902503985.1	CABWDS000000000	SAMEA5615415	Escherichia coli
GCA_902503875.1	CABWDE000000000	SAMEA5615688	Escherichia coli
GCA_902503925.1	CABWDK000000000	SAMEA5615329	Escherichia coli
GCA_902503835.1	CABWDJ000000000	SAMEA5615413	Escherichia coli
GCA_902503825.1	CABWDD000000000	SAMEA5615338	Escherichia coli
GCA_902503725.1	CABWCK000000000	SAMEA5615397	Escherichia coli
GCA_902503635.1	CABWCP000000000	SAMEA5615438	Escherichia coli
GCA_902503595.1	CABWCC000000000	SAMEA5615334	Escherichia coli
GCA_902503545.1	CABWCF000000000	SAMEA5615327	Escherichia coli
GCA_902504275.1	CABWEQ000000000	SAMEA5615523	Escherichia coli
GCA_902504255.1	CABWEV000000000	SAMEA5615563	Escherichia coli
GCA_902504545.1	CABWFU000000000	SAMEA5615411	Escherichia coli
GCA_902504595.1	CABWGD000000000	SAMEA5615541	Escherichia coli
GCA_902504685.1	CABWGK000000000	SAMEA5615295	Escherichia coli
GCA_902504725.1	CABWGS000000000	SAMEA5615680	Escherichia coli
GCA_902504745.1	CABWGP000000000	SAMEA5615702	Escherichia coli
GCA_902502785.1	CABVZF000000000	SAMEA5615479	Escherichia coli
GCA_902502805.1	CABVZG000000000	SAMEA5614054	Escherichia coli
GCA_902502655.1	CABVYM000000000	SAMEA5614302	Escherichia coli
GCA_902502595.1	CABVYO000000000	SAMEA5615684	Escherichia coli
GCA_902502555.1	CABVYQ000000000	SAMEA5615685	Escherichia coli
GCA_902502575.1	CABVYT000000000	SAMEA5615322	Escherichia coli
GCA_902502625.1	CABVYX000000000	SAMEA5615406	Escherichia coli
GCA_902502465.1	CABVYC000000000	SAMEA5615330	Escherichia coli
GCA_902502435.1	CABVXZ000000000	SAMEA5615499	Escherichia coli
GCA_902502415.1	CABVXX000000000	SAMEA5615316	Escherichia coli
GCA_902502425.1	CABVXY000000000	SAMEA5615544	Escherichia coli
GCA_902502355.1	CABVXQ000000000	SAMEA5615442	Escherichia coli
GCA_902502385.1	CABVXT000000000	SAMEA5615394	Escherichia coli
GCA_902502325.1	CABVXI000000000	SAMEA5615699	Escherichia coli
GCA_902503255.1	CABWAS000000000	SAMEA5615428	Escherichia coli
GCA_902503205.1	CABWAY000000000	SAMEA5615332	Escherichia coli
GCA_902503235.1	CABWAQ000000000	SAMEA5615303	Escherichia coli
GCA_902503355.1	CABWBK000000000	SAMEA5615312	Escherichia coli
GCA_902503315.1	CABWBG000000000	SAMEA5615679	Escherichia coli
GCA_902503475.1	CABWBS000000000	SAMEA5615362	Escherichia coli
GCA_902503495.1	CABWBW000000000	SAMEA5615682	Escherichia coli
GCA_902503525.1	CABWCA000000000	SAMEA5615340	Escherichia coli
GCA_902503395.1	CABWBM000000000	SAMEA5615520	Escherichia coli
GCA_902503385.1	CABWBO000000000	SAMEA5615513	Escherichia coli
GCA_902503145.1	CABWAK000000000	SAMEA5615512	Escherichia coli
GCA_902503105.1	CABWAJ000000000	SAMEA5615533	Escherichia coli
GCA_902503025.1	CABWAC000000000	SAMEA5613673	Escherichia coli
GCA_902502995.1	CABWAA000000000	SAMEA5615399	Escherichia coli
GCA_902503005.1	CABVZZ000000000	SAMEA5615528	Escherichia coli
GCA_902502925.1	CABVZS000000000	SAMEA5615404	Escherichia coli
GCA_902502915.1	CABVZQ000000000	SAMEA5615292	Escherichia coli
GCA_902504835.1	CABWGY000000000	SAMEA5615417	Escherichia coli
GCA_902504925.1	CABWHK000000000	SAMEA5615687	Escherichia coli
GCA_902504915.1	CABWHJ000000000	SAMEA5615534	Escherichia coli
GCA_902504935.1	CABWHG000000000	SAMEA5615412	Escherichia coli
GCA_902505055.1	CABWIA000000000	SAMEA5615504	Escherichia coli
GCA_902504505.1	CABWFY000000000	SAMEA5615681	Escherichia coli
GCA_902503745.1	CABWCZ000000000	SAMEA5615357	Shigella boydii
GCA_902501695.1	CABVVE000000000	SAMEA5615425	Shigella boydii
GCA_902501705.1	CABVVG000000000	SAMEA5615348	Shigella flexneri
GCA_902501825.1	CABVVU000000000	SAMEA5615440	Shigella flexneri
GCA_902501815.1	CABVVR000000000	SAMEA5615485	Shigella flexneri
GCA_902501955.1	CABVWF000000000	SAMEA5615537	Shigella flexneri
GCA_902501945.1	CABVWC000000000	SAMEA5615383	Shigella flexneri
GCA_902501935.1	CABVWB000000000	SAMEA5615506	Shigella flexneri
GCA_902501845.1	CABVVQ000000000	SAMEA5614298	Shigella flexneri
GCA_902501905.1	CABVWD000000000	SAMEA5615309	Shigella flexneri
GCA_902502225.1	CABVXE000000000	SAMEA5615296	Shigella flexneri
GCA_902502235.1	CABVXF000000000	SAMEA5615474	Shigella flexneri
GCA_902502315.1	CABVXN000000000	SAMEA5615273	Shigella flexneri
GCA_902502185.1	CABVXC000000000	SAMEA5615514	Shigella flexneri
GCA_902502075.1	CABVWO000000000	SAMEA5615518	Shigella flexneri
GCA_902502095.1	CABVWS000000000	SAMEA5615286	Shigella flexneri
GCA_902502055.1	CABVWU000000000	SAMEA5615497	Shigella flexneri
GCA_902502035.1	CABVWG000000000	SAMEA5614098	Shigella flexneri
GCA_902502005.1	CABVWI000000000	SAMEA5615494	Shigella flexneri
GCA_902501985.1	CABVWL000000000	SAMEA5615532	Shigella flexneri
GCA_902501525.1	CABVUP000000000	SAMEA5615426	Shigella flexneri
GCA_902501675.1	CABVUZ000000000	SAMEA5615475	Shigella flexneri
GCA_902501585.1	CABVUT000000000	SAMEA5615390	Shigella flexneri
GCA_902501565.1	CABVUM000000000	SAMEA5615439	Shigella flexneri
GCA_902501645.1	CABVVA000000000	SAMEA5615473	Shigella flexneri
GCA_902503855.1	CABWDL000000000	SAMEA5615441	Shigella flexneri
GCA_902504035.1	CABWED000000000	SAMEA5615277	Shigella flexneri
GCA_902503995.1	CABWDV000000000	SAMEA5615484	Shigella flexneri
GCA_902503845.1	CABWDN000000000	SAMEA5615360	Shigella flexneri
GCA_902503955.1	CABWDT000000000	SAMEA5615566	Shigella flexneri
GCA_902503685.1	CABWCM000000000	SAMEA5615270	Shigella flexneri
GCA_902503775.1	CABWDB000000000	SAMEA5615524	Shigella flexneri
GCA_902503675.1	CABWCR000000000	SAMEA5614095	Shigella flexneri
GCA_902503645.1	CABWCL000000000	SAMEA5614091	Shigella flexneri
GCA_902503585.1	CABWCE000000000	SAMEA5615545	Shigella flexneri
GCA_902503785.1	CABWCW000000000	SAMEA5615356	Shigella flexneri
GCA_902503535.1	CABWBR000000000	SAMEA5615525	Shigella flexneri
GCA_902503445.1	CABWBZ000000000	SAMEA5615393	Shigella flexneri
GCA_902503515.1	CABWBY000000000	SAMEA5615294	Shigella flexneri
GCA_902504325.1	CABWEX000000000	SAMEA5615386	Shigella flexneri
GCA_902504345.1	CABWFF000000000	SAMEA5615554	Shigella flexneri
GCA_902504265.1	CABWER000000000	SAMEA5615495	Shigella flexneri
GCA_902504245.1	CABWEY000000000	SAMEA5615551	Shigella flexneri
GCA_902504215.1	CABWET000000000	SAMEA5615370	Shigella flexneri
GCA_902504085.1	CABWEB000000000	SAMEA5615372	Shigella flexneri
GCA_902504015.1	CABWEE000000000	SAMEA5615432	Shigella flexneri
GCA_902504155.1	CABWEM000000000	SAMEA5614097	Shigella flexneri
GCA_902504175.1	CABWEP000000000	SAMEA5615385	Shigella flexneri
GCA_902504645.1	CABWGJ000000000	SAMEA5615515	Shigella flexneri
GCA_902504705.1	CABWGM000000000	SAMEA5615516	Shigella flexneri
GCA_902504585.1	CABWGG000000000	SAMEA5615258	Shigella flexneri
GCA_902504615.1	CABWGF000000000	SAMEA5615306	Shigella flexneri
GCA_902504635.1	CABWGE000000000	SAMEA5612932	Shigella flexneri
GCA_902504495.1	CABWFS000000000	SAMEA5615398	Shigella flexneri
GCA_902504485.1	CABWFW000000000	SAMEA5615562	Shigella flexneri
GCA_902504455.1	CABWFR000000000	SAMEA5614092	Shigella flexneri
GCA_902504435.1	CABWFN000000000	SAMEA5615336	Shigella flexneri
GCA_902504395.1	CABWFI000000000	SAMEA5614289	Shigella flexneri
GCA_902502815.1	CABVZH000000000	SAMEA5615284	Shigella flexneri
GCA_902502685.1	CABVZB000000000	SAMEA5615400	Shigella flexneri
GCA_902502605.1	CABVYV000000000	SAMEA5615367	Shigella flexneri
GCA_902502635.1	CABVYU000000000	SAMEA5615313	Shigella flexneri
GCA_902502525.1	CABVYI000000000	SAMEA5615349	Shigella flexneri
GCA_902502535.1	CABVYG000000000	SAMEA5615326	Shigella flexneri
GCA_902502695.1	CABVYY000000000	SAMEA5615389	Shigella flexneri
GCA_902502305.1	CABVXO000000000	SAMEA5615431	Shigella flexneri
GCA_902502335.1	CABVXJ000000000	SAMEA5614290	Shigella flexneri
GCA_902503195.1	CABWAU000000000	SAMEA5615319	Shigella flexneri
GCA_902503295.1	CABWBC000000000	SAMEA5615265	Shigella flexneri
GCA_902503485.1	CABWBQ000000000	SAMEA5615546	Shigella flexneri
GCA_902503415.1	CABWBN000000000	SAMEA5615333	Shigella flexneri
GCA_902503375.1	CABWBP000000000	SAMEA5615690	Shigella flexneri
GCA_902503115.1	CABWAM000000000	SAMEA5615470	Shigella flexneri
GCA_902503155.1	CABWAR000000000	SAMEA5615328	Shigella flexneri
GCA_902503225.1	CABWAV000000000	SAMEA5615538	Shigella flexneri
GCA_902503055.1	CABWAF000000000	SAMEA5615548	Shigella flexneri
GCA_902503095.1	CABWAL000000000	SAMEA5615500	Shigella flexneri
GCA_902503045.1	CABWAG000000000	SAMEA5615408	Shigella flexneri
GCA_902502945.1	CABVZP000000000	SAMEA5615418	Shigella flexneri
GCA_902504825.1	CABWGU000000000	SAMEA5615347	Shigella flexneri
GCA_902504765.1	CABWGX000000000	SAMEA5615363	Shigella flexneri
GCA_902504795.1	CABWHA000000000	SAMEA5615280	Shigella flexneri
GCA_902504815.1	CABWGV000000000	SAMEA5615374	Shigella flexneri
GCA_902505015.1	CABWHP000000000	SAMEA5615375	Shigella flexneri
GCA_902504975.1	CABWHT000000000	SAMEA5615491	Shigella flexneri
GCA_902504985.1	CABWHQ000000000	SAMEA5615490	Shigella flexneri
GCA_902504955.1	CABWHC000000000	SAMEA5615387	Shigella flexneri
GCA_902504965.1	CABWHV000000000	SAMEA5615555	Shigella flexneri
GCA_902504875.1	CABWHF000000000	SAMEA5615567	Shigella flexneri
GCA_902504905.1	CABWHD000000000	SAMEA5615268	Shigella sonnei
GCA_902504895.1	CABWHE000000000	SAMEA5615476	Shigella sonnei
GCA_902504945.1	CABWHL000000000	SAMEA5615300	Shigella sonnei
GCA_902505005.1	CABWHR000000000	SAMEA5615314	Shigella sonnei
GCA_902505035.1	CABWHS000000000	SAMEA5615301	Shigella sonnei
GCA_902505075.1	CABWHY000000000	SAMEA5615698	Shigella sonnei
GCA_902505065.1	CABWHX000000000	SAMEA5615381	Shigella sonnei
GCA_902504755.1	CABWGR000000000	SAMEA5615414	Shigella sonnei
GCA_902504735.1	CABWGQ000000000	SAMEA5615355	Shigella sonnei
GCA_902504775.1	CABWGW000000000	SAMEA5615377	Shigella sonnei
GCA_902504885.1	CABWHI000000000	SAMEA5615543	Shigella sonnei
GCA_902504845.1	CABWHH000000000	SAMEA5614285	Shigella sonnei
GCA_902504855.1	CABWHM000000000	SAMEA5615376	Shigella sonnei
GCA_902504805.1	CABWHB000000000	SAMEA5615369	Shigella sonnei
GCA_902504865.1	CABWHN000000000	SAMEA5615409	Shigella sonnei
GCA_902504785.1	CABWGZ000000000	SAMEA5615704	Shigella sonnei
GCA_902502905.1	CABVZR000000000	SAMEA5615320	Shigella sonnei
GCA_902502965.1	CABVZV000000000	SAMEA5615547	Shigella sonnei
GCA_902502935.1	CABVZU000000000	SAMEA5615282	Shigella sonnei
GCA_902502975.1	CABVZX000000000	SAMEA5615496	Shigella sonnei
GCA_902502985.1	CABWAD000000000	SAMEA5615352	Shigella sonnei
GCA_902503015.1	CABWAH000000000	SAMEA5615317	Shigella sonnei
GCA_902503035.1	CABVZW000000000	SAMEA5613997	Shigella sonnei
GCA_902502955.1	CABWAB000000000	SAMEA5614293	Shigella sonnei
GCA_902503125.1	CABWAN000000000	SAMEA5615697	Shigella sonnei
GCA_902503085.1	CABWAI000000000	SAMEA5615419	Shigella sonnei
GCA_902503075.1	CABVZY000000000	SAMEA5615703	Shigella sonnei
GCA_902503065.1	CABWAE000000000	SAMEA5615388	Shigella sonnei
GCA_902503185.1	CABWBA000000000	SAMEA5615358	Shigella sonnei
GCA_902503175.1	CABWAZ000000000	SAMEA5615379	Shigella sonnei
GCA_902503165.1	CABWBB000000000	SAMEA5615403	Shigella sonnei
GCA_902503135.1	CABWAO000000000	SAMEA5615493	Shigella sonnei
GCA_902503365.1	CABWBJ000000000	SAMEA5614284	Shigella sonnei
GCA_902503425.1	CABWCB000000000	SAMEA5615395	Shigella sonnei
GCA_902503405.1	CABWBL000000000	SAMEA5615559	Shigella sonnei
GCA_902503435.1	CABWBT000000000	SAMEA5615391	Shigella sonnei
GCA_902503505.1	CABWBU000000000	SAMEA5615502	Shigella sonnei
GCA_902503465.1	CABWBV000000000	SAMEA5615297	Shigella sonnei
GCA_902503325.1	CABWBF000000000	SAMEA5615505	Shigella sonnei
GCA_902503335.1	CABWBD000000000	SAMEA5615553	Shigella sonnei
GCA_902503345.1	CABWBE000000000	SAMEA5615477	Shigella sonnei
GCA_902503285.1	CABWBI000000000	SAMEA5615695	Shigella sonnei
GCA_902503305.1	CABWBH000000000	SAMEA5615560	Shigella sonnei
GCA_902503215.1	CABWAT000000000	SAMEA5615471	Shigella sonnei
GCA_902503265.1	CABWAP000000000	SAMEA5615552	Shigella sonnei
GCA_902503275.1	CABWAW000000000	SAMEA5615343	Shigella sonnei
GCA_902503245.1	CABWAX000000000	SAMEA5615335	Shigella sonnei
GCA_902502345.1	CABVXR000000000	SAMEA5615539	Shigella sonnei
GCA_902502255.1	CABVXP000000000	SAMEA5615382	Shigella sonnei
GCA_902502295.1	CABVXK000000000	SAMEA5615298	Shigella sonnei
GCA_902502265.1	CABVXL000000000	SAMEA5615701	Shigella sonnei
GCA_902502395.1	CABVXW000000000	SAMEA5615558	Shigella sonnei
GCA_902502375.1	CABVXS000000000	SAMEA5615267	Shigella sonnei
GCA_902502365.1	CABVXU000000000	SAMEA5615492	Shigella sonnei
GCA_902502405.1	CABVXV000000000	SAMEA5615378	Shigella sonnei
GCA_902502475.1	CABVYE000000000	SAMEA5615557	Shigella sonnei
GCA_902502485.1	CABVYB000000000	SAMEA5615561	Shigella sonnei
GCA_902502495.1	CABVYF000000000	SAMEA5615519	Shigella sonnei
GCA_902502455.1	CABVYA000000000	SAMEA5615346	Shigella sonnei
GCA_902502445.1	CABVYD000000000	SAMEA5615503	Shigella sonnei
GCA_902502515.1	CABVYJ000000000	SAMEA5615315	Shigella sonnei
GCA_902502505.1	CABVYH000000000	SAMEA5615302	Shigella sonnei
GCA_902502545.1	CABVYK000000000	SAMEA5615276	Shigella sonnei
GCA_902502615.1	CABVYW000000000	SAMEA5615401	Shigella sonnei
GCA_902502585.1	CABVYL000000000	SAMEA5614341	Shigella sonnei
GCA_902502645.1	CABVYP000000000	SAMEA5615365	Shigella sonnei
GCA_902502565.1	CABVYN000000000	SAMEA5615263	Shigella sonnei
GCA_902502675.1	CABVYR000000000	SAMEA5615482	Shigella sonnei
GCA_902502715.1	CABVYZ000000000	SAMEA5615510	Shigella sonnei
GCA_902502705.1	CABVZA000000000	SAMEA5615293	Shigella sonnei
GCA_902502665.1	CABVYS000000000	SAMEA5615405	Shigella sonnei
GCA_902502725.1	CABVZC000000000	SAMEA5615305	Shigella sonnei
GCA_902502735.1	CABVZD000000000	SAMEA5615353	Shigella sonnei
GCA_902502745.1	CABVZE000000000	SAMEA5615487	Shigella sonnei
GCA_902502845.1	CABVZK000000000	SAMEA5615693	Shigella sonnei
GCA_902502795.1	CABVZN000000000	SAMEA5614286	Shigella sonnei
GCA_902502765.1	CABVZL000000000	SAMEA5615262	Shigella sonnei
GCA_902502835.1	CABVZM000000000	SAMEA5615260	Shigella sonnei
GCA_902502885.1	CABVZT000000000	SAMEA5615275	Shigella sonnei
GCA_902502755.1	CABVZI000000000	SAMEA5615565	Shigella sonnei
GCA_902502855.1	CABVZO000000000	SAMEA5614300	Shigella sonnei
GCA_902502865.1	CABVZJ000000000	SAMEA5614301	Shigella sonnei
GCA_902504425.1	CABWFQ000000000	SAMEA5614308	Shigella sonnei
GCA_902504405.1	CABWFP000000000	SAMEA5615694	Shigella sonnei
GCA_902504385.1	CABWFJ000000000	SAMEA5615287	Shigella sonnei
GCA_902504475.1	CABWFM000000000	SAMEA5615536	Shigella sonnei
GCA_902504515.1	CABWFV000000000	SAMEA5615480	Shigella sonnei
GCA_902504525.1	CABWFT000000000	SAMEA5615384	Shigella sonnei
GCA_902504555.1	CABWFX000000000	SAMEA5614149	Shigella sonnei
GCA_902504535.1	CABWFZ000000000	SAMEA5615264	Shigella sonnei
GCA_902504445.1	CABWFK000000000	SAMEA5615274	Shigella sonnei
GCA_902504465.1	CABWFO000000000	SAMEA5615469	Shigella sonnei
GCA_902504625.1	CABWGH000000000	SAMEA5615420	Shigella sonnei
GCA_902504695.1	CABWGO000000000	SAMEA5615508	Shigella sonnei
GCA_902504605.1	CABWGA000000000	SAMEA5615686	Shigella sonnei
GCA_902504565.1	CABWGC000000000	SAMEA5615529	Shigella sonnei
GCA_902504575.1	CABWGB000000000	SAMEA5615705	Shigella sonnei
GCA_902504665.1	CABWGN000000000	SAMEA5615527	Shigella sonnei
GCA_902504715.1	CABWGT000000000	SAMEA5615410	Shigella sonnei
GCA_902504655.1	CABWGL000000000	SAMEA5615359	Shigella sonnei
GCA_902504675.1	CABWGI000000000	SAMEA5615416	Shigella sonnei
GCA_902504145.1	CABWEK000000000	SAMEA5615307	Shigella sonnei
GCA_902504185.1	CABWEL000000000	SAMEA5615278	Shigella sonnei
GCA_902504225.1	CABWEU000000000	SAMEA5615257	Shigella sonnei
GCA_902504205.1	CABWFD000000000	SAMEA5615689	Shigella sonnei
GCA_902504075.1	CABWEF000000000	SAMEA5615261	Shigella sonnei
GCA_902504005.1	CABWEA000000000	SAMEA5613971	Shigella sonnei
GCA_902504135.1	CABWEJ000000000	SAMEA5615337	Shigella sonnei
GCA_902504055.1	CABWDZ000000000	SAMEA5615507	Shigella sonnei
GCA_902504165.1	CABWEO000000000	SAMEA5614096	Shigella sonnei
GCA_902504195.1	CABWEN000000000	SAMEA5615380	Shigella sonnei
GCA_902504235.1	CABWFC000000000	SAMEA5615427	Shigella sonnei
GCA_902504315.1	CABWFA000000000	SAMEA5615691	Shigella sonnei
GCA_902504305.1	CABWEZ000000000	SAMEA5615501	Shigella sonnei
GCA_902504285.1	CABWFB000000000	SAMEA5615509	Shigella sonnei
GCA_902504335.1	CABWEW000000000	SAMEA5615429	Shigella sonnei
GCA_902504295.1	CABWES000000000	SAMEA5614299	Shigella sonnei
GCA_902504415.1	CABWFL000000000	SAMEA5615290	Shigella sonnei
GCA_902504365.1	CABWFG000000000	SAMEA5615407	Shigella sonnei
GCA_902504375.1	CABWFH000000000	SAMEA5615526	Shigella sonnei
GCA_902504355.1	CABWFE000000000	SAMEA5615556	Shigella sonnei
GCA_902503555.1	CABWCH000000000	SAMEA5615486	Shigella sonnei
GCA_902503565.1	CABWCD000000000	SAMEA5615341	Shigella sonnei
GCA_902503455.1	CABWBX000000000	SAMEA5615535	Shigella sonnei
GCA_902503575.1	CABWCG000000000	SAMEA5615350	Shigella sonnei
GCA_902503625.1	CABWCS000000000	SAMEA5613970	Shigella sonnei
GCA_902503615.1	CABWCT000000000	SAMEA5615345	Shigella sonnei
GCA_902503605.1	CABWCU000000000	SAMEA5613672	Shigella sonnei
GCA_902503695.1	CABWCV000000000	SAMEA5615421	Shigella sonnei
GCA_902503795.1	CABWDA000000000	SAMEA5615351	Shigella sonnei
GCA_902503765.1	CABWCX000000000	SAMEA5614304	Shigella sonnei
GCA_902503755.1	CABWCY000000000	SAMEA5615299	Shigella sonnei
GCA_902503655.1	CABWCO000000000	SAMEA5615339	Shigella sonnei
GCA_902503665.1	CABWCI000000000	SAMEA5615266	Shigella sonnei
GCA_902503735.1	CABWCN000000000	SAMEA5615366	Shigella sonnei
GCA_902503715.1	CABWCQ000000000	SAMEA5615472	Shigella sonnei
GCA_902503705.1	CABWCJ000000000	SAMEA5615445	Shigella sonnei
GCA_902503905.1	CABWDO000000000	SAMEA5615550	Shigella sonnei
GCA_902503975.1	CABWDU000000000	SAMEA5615489	Shigella sonnei
GCA_902503965.1	CABWDR000000000	SAMEA5615324	Shigella sonnei
GCA_902503945.1	CABWDQ000000000	SAMEA5615344	Shigella sonnei
GCA_902504045.1	CABWDW000000000	SAMEA5615430	Shigella sonnei
GCA_902504095.1	CABWEI000000000	SAMEA5615498	Shigella sonnei
GCA_902504125.1	CABWEG000000000	SAMEA5615311	Shigella sonnei
GCA_902504105.1	CABWEC000000000	SAMEA5615364	Shigella sonnei
GCA_902504115.1	CABWEH000000000	SAMEA5615483	Shigella sonnei
GCA_902504025.1	CABWDX000000000	SAMEA5615304	Shigella sonnei
GCA_902503805.1	CABWDC000000000	SAMEA5615259	Shigella sonnei
GCA_902503865.1	CABWDI000000000	SAMEA5614291	Shigella sonnei
GCA_902503815.1	CABWDP000000000	SAMEA5615342	Shigella sonnei
GCA_902503895.1	CABWDM000000000	SAMEA5615371	Shigella sonnei
GCA_902503885.1	CABWDG000000000	SAMEA5615517	Shigella sonnei
GCA_902503935.1	CABWDH000000000	SAMEA5613969	Shigella sonnei
GCA_902503915.1	CABWDF000000000	SAMEA5615285	Shigella sonnei
GCA_902501555.1	CABVUO000000000	SAMEA5615521	Shigella sonnei
GCA_902501545.1	CABVUL000000000	SAMEA5615269	Shigella sonnei
GCA_902501655.1	CABVUW000000000	SAMEA5615279	Shigella sonnei
GCA_902501635.1	CABVVC000000000	SAMEA5615368	Shigella sonnei
GCA_902501685.1	CABVVB000000000	SAMEA5615696	Shigella sonnei
GCA_902501615.1	CABVUX000000000	SAMEA5615325	Shigella sonnei
GCA_902501665.1	CABVUV000000000	SAMEA5615361	Shigella sonnei
GCA_902501625.1	CABVUY000000000	SAMEA5615396	Shigella sonnei
GCA_902501485.1	CABVUK000000000	SAMEA5615402	Shigella sonnei
GCA_902501505.1	CABVUQ000000000	SAMEA5615481	Shigella sonnei
GCA_902501995.1	CABVWJ000000000	SAMEA5615291	Shigella sonnei
GCA_902502015.1	CABVWM000000000	SAMEA5615564	Shigella sonnei
GCA_902502045.1	CABVWK000000000	SAMEA5615540	Shigella sonnei
GCA_902502125.1	CABVWN000000000	SAMEA5615308	Shigella sonnei
GCA_902502065.1	CABVWP000000000	SAMEA5615511	Shigella sonnei
GCA_902502085.1	CABVWQ000000000	SAMEA5615318	Shigella sonnei
GCA_902502145.1	CABVWY000000000	SAMEA5615392	Shigella sonnei
GCA_902502215.1	CABVXD000000000	SAMEA5615531	Shigella sonnei
GCA_902502155.1	CABVWZ000000000	SAMEA5615422	Shigella sonnei
GCA_902502165.1	CABVWX000000000	SAMEA5615331	Shigella sonnei
GCA_902502285.1	CABVXH000000000	SAMEA5614093	Shigella sonnei
GCA_902502245.1	CABVXG000000000	SAMEA5615424	Shigella sonnei
GCA_902502275.1	CABVXM000000000	SAMEA5615271	Shigella sonnei
GCA_902502195.1	CABVXA000000000	SAMEA5615354	Shigella sonnei
GCA_902501895.1	CABVVY000000000	SAMEA5615530	Shigella sonnei
GCA_902501885.1	CABVVX000000000	SAMEA5615289	Shigella sonnei
GCA_902501865.1	CABVVO000000000	SAMEA5615444	Shigella sonnei
GCA_902501835.1	CABVVT000000000	SAMEA5615700	Shigella sonnei
GCA_902501875.1	CABVVW000000000	SAMEA5615288	Shigella sonnei
GCA_902501925.1	CABVVZ000000000	SAMEA5614339	Shigella sonnei
GCA_902501785.1	CABVVP000000000	SAMEA5614305	Shigella sonnei
GCA_902501775.1	CABVVN000000000	SAMEA5614303	Shigella sonnei
GCA_902501795.1	CABVVS000000000	SAMEA5614297	Shigella sonnei
GCA_902501715.1	CABVVD000000000	SAMEA5615283	Shigella sonnei
GCA_902501745.1	CABVVL000000000	SAMEA5613681	Shigella sonnei
GCA_902501755.1	CABVVK000000000	SAMEA5615488	Shigella sonnei

SRA Data Details

Parameter	Value
Data volume, Gbases	176
Data volume, Tbytes	0.11

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WGS of Shigella spp and EIEC isolates from IBESS

WGS of Shigella spp and EIEC isolates from a cross-sectional study in the Netherlands, collected during 2016 and 2017.

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