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Accession: PRJNA561882 ID: 561882

Soil Listeria project

Study the nationwide distribution of Listeria in soil from natural environment
AccessionPRJNA561882
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 23-Aug-2019
Cornell University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1844
WGS master505
SRA Experiments505
Protein Sequences250876
Other datasets
BioSample505
Assembly505
Assembly details:
Assembly levelNumber of Assemblies
505
505
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_014223975.1ContigJAARRM000000000SAMN14390322
FSL L7-1507
GCA_014223965.1ContigJAASUE000000000SAMN14390319
FSL L7-1491
GCA_014224325.1ContigJAARRW000000000SAMN14390303
FSL L7-1387
GCA_014224295.1ContigJAARRV000000000SAMN14390304
FSL L7-1409
GCA_014224255.1ContigJAARRU000000000SAMN14390307
FSL L7-1427
GCA_014224245.1ContigJAARRT000000000SAMN14390308
FSL L7-1430
GCA_014223875.1ContigJAARRK000000000SAMN14390329
FSL L7-1529
GCA_014223815.1ContigJAASTX000000000SAMN14390333
FSL L7-1547
GCA_014223805.1ContigJAARRI000000000SAMN14390331
FSL L7-1541
GCA_014224025.1ContigJAARRO000000000SAMN14390320
FSL L7-1497
GCA_014224925.1ContigJAASUR000000000SAMN14390275
FSL L7-1250
GCA_014224665.1ContigJAARSH000000000SAMN14390289
FSL L7-1299
GCA_014224405.1ContigJAARRX000000000SAMN14390302
FSL L7-1385
GCA_014223095.1ContigJAARPT000000000SAMN14390379
FSL L7-1658
GCA_014222965.1ContigJAARPL000000000SAMN14390387
FSL L7-1681
GCA_014222895.1ContigJAARPI000000000SAMN14390390
FSL L7-1698
GCA_014222675.1ContigJAAROZ000000000SAMN14390403
FSL L7-1773
GCA_014222665.1ContigJAARPA000000000SAMN14390402
FSL L7-1769
GCA_014222605.1ContigJAAROV000000000SAMN14390407
FSL L7-1816
GCA_014222525.1ContigJAAROR000000000SAMN14390411
FSL L7-1826
GCA_014222485.1ContigJAAROS000000000SAMN14390410
FSL L7-1825
GCA_014222465.1ContigJAAROQ000000000SAMN14390412
FSL L7-1827
GCA_014222445.1ContigJAAROO000000000SAMN14390414
FSL L7-1830
GCA_014222405.1ContigJAARON000000000SAMN14390415
FSL L7-1831
GCA_014222565.1ContigJAAROT000000000SAMN14390409
FSL L7-1824
GCA_014222385.1ContigJAAROL000000000SAMN14390417
FSL L7-1833
GCA_014222345.1ContigJAAROK000000000SAMN14390418
FSL L7-1834
GCA_014222325.1ContigJAAROI000000000SAMN14390420
FSL L7-1836
GCA_014231305.1ContigJAARZR000000000SAMN14390036
FSL L7-0058
GCA_014230405.1ContigJAARNB000000000SAMN14390423
FSL L7-1842
GCA_014230375.1ContigJAARNA000000000SAMN14390424
FSL L7-1843
GCA_014229925.1ContigJAARMZ000000000SAMN14390425
FSL L7-1844
GCA_014229875.1ContigJAARMW000000000SAMN14390428
FSL L7-1848
GCA_014229865.1ContigJAARMV000000000SAMN14390429
FSL L7-1850
GCA_014229585.1ContigJAARZY000000000SAMN14390026
FSL L7-0030
GCA_014229565.1ContigJAARZZ000000000SAMN14390025
FSL L7-0029
GCA_014229545.1ContigJAARZX000000000SAMN14390028
FSL L7-0033
GCA_014229625.1ContigJAATOC000000000SAMN14390024
FSL L7-0025
GCA_014229495.1ContigJAARZW000000000SAMN14390029
FSL L7-0035
GCA_014229405.1ContigJAARZS000000000SAMN14390035
FSL L7-0054
GCA_014229385.1ContigJAARZT000000000SAMN14390034
FSL L7-0051
GCA_014229465.1ContigJAASWV000000000SAMN14390032
FSL L7-0039
GCA_014229255.1ContigJAARZK000000000SAMN14390044
FSL L7-0084
GCA_014229205.1ContigJAARZI000000000SAMN14390046
FSL L7-0094
GCA_014229035.1ContigJAARZA000000000SAMN14390055
FSL L7-0149
GCA_014228985.1ContigJAARYY000000000SAMN14390057
FSL L7-0153
GCA_014226945.1ContigJAASVH000000000SAMN14390158
FSL L7-0729
GCA_014227315.1ContigJAARWQ000000000SAMN14390143
FSL L7-0587
GCA_014227245.1ContigJAASVU000000000SAMN14390144
FSL L7-0605
GCA_014227585.1ContigJAARWT000000000SAMN14390128
FSL L7-0514
GCA_014227595.1ContigJAARWU000000000SAMN14390126
FSL L7-0509
GCA_014227605.1ContigJAASWH000000000SAMN14390127
FSL L7-0510
GCA_014227545.1ContigJAASWF000000000SAMN14390131
FSL L7-0520
GCA_014227535.1ContigJAARWS000000000SAMN14390130
FSL L7-0519
GCA_014227505.1ContigJAASWD000000000SAMN14390133
FSL L7-0527
GCA_014227815.1ContigJAARWW000000000SAMN14390116
FSL L7-0435
GCA_014227805.1ContigJAARWV000000000SAMN14390117
FSL L7-0459
GCA_014228595.1ContigJAARYE000000000SAMN14390079
FSL L7-0256
GCA_014228585.1ContigJAARYD000000000SAMN14390080
FSL L7-0259
GCA_014228555.1ContigJAARYF000000000SAMN14390078
FSL L7-0255
GCA_014228545.1ContigJAARYH000000000SAMN14390076
FSL L7-0245
GCA_014228475.1ContigJAASWS000000000SAMN14390082
FSL L7-0273
GCA_014228485.1ContigJAARYC000000000SAMN14390081
FSL L7-0269
GCA_014228455.1ContigJAARYB000000000SAMN14390083
FSL L7-0278
GCA_014228685.1ContigJAARYK000000000SAMN14390073
FSL L7-0232
GCA_014228655.1ContigJAARYI000000000SAMN14390075
FSL L7-0236
GCA_014228745.1ContigJAARYN000000000SAMN14390070
FSL L7-0217
GCA_014228725.1ContigJAARYL000000000SAMN14390072
FSL L7-0231
GCA_014228135.1ContigJAARXI000000000SAMN14390102
FSL L7-0360
GCA_014228125.1ContigJAARXL000000000SAMN14390099
FSL L7-0335
GCA_014228005.1ContigJAARXD000000000SAMN14390107
FSL L7-0370
GCA_014227915.1ContigJAARWY000000000SAMN14390112
FSL L7-0385
GCA_014226645.1ContigJAARWF000000000SAMN14390174
FSL L7-0818
GCA_014226585.1ContigJAARWB000000000SAMN14390179
FSL L7-0859
GCA_014226705.1ContigJAARWH000000000SAMN14390172
FSL L7-0815
GCA_014226695.1ContigJAARWI000000000SAMN14390171
FSL L7-0811
GCA_014226685.1ContigJAARWG000000000SAMN14390173
FSL L7-0816
GCA_014226865.1ContigJAASVD000000000SAMN14390164
FSL L7-0767
GCA_014226005.1ContigJAARVD000000000SAMN14390208
FSL L7-0990
GCA_014225995.1ContigJAARVE000000000SAMN14390207
FSL L7-0984
GCA_014226055.1ContigJAARVG000000000SAMN14390205
FSL L7-0978
GCA_014226045.1ContigJAARVF000000000SAMN14390206
FSL L7-0979
GCA_014225785.1ContigJAARUV000000000SAMN14390217
FSL L7-1017
GCA_014225945.1ContigJAARVC000000000SAMN14390210
FSL L7-0994
GCA_014322345.1ContigJAARQY000000000SAMN14390347
FSL L7-1586
GCA_014322265.1ContigJAARQU000000000SAMN14390352
FSL L7-1594
GCA_014322755.1ContigJAASTS000000000SAMN14390349
FSL L7-1588
GCA_014322745.1ContigJAASTP000000000SAMN14390401
FSL L7-1761
GCA_014322565.1ContigJAARUF000000000SAMN14390234
FSL L7-1071
GCA_014322625.1ContigJAARUK000000000SAMN14390229
FSL L7-1063
GCA_014322635.1ContigJAARUH000000000SAMN14390232
FSL L7-1069
GCA_014225985.1ContigJAASUV000000000SAMN14390209
FSL L7-0993
GCA_014228695.1ContigJAARYM000000000SAMN14390071
FSL L7-0229
GCA_014228645.1ContigJAARYJ000000000SAMN14390074
FSL L7-0233
GCA_014228605.1ContigJAARYG000000000SAMN14390077
FSL L7-0253
GCA_014227775.1ContigJAASWP000000000SAMN14390118
FSL L7-0478
GCA_014229095.1ContigJAARZC000000000SAMN14390052
FSL L7-0123
GCA_014224225.1ContigJAASUL000000000SAMN14390306
FSL L7-1426
GCA_014224195.1ContigJAASUK000000000SAMN14390309
FSL L7-1434
GCA_014224155.1ContigJAASUI000000000SAMN14390311
FSL L7-1447
GCA_014224145.1ContigJAASUJ000000000SAMN14390310
FSL L7-1435
GCA_014224285.1ContigJAASUM000000000SAMN14390305
FSL L7-1425
GCA_014222925.1ContigJAARPJ000000000SAMN14390389
FSL L7-1693
GCA_014222885.1ContigJAARPH000000000SAMN14390391
FSL L7-1699
GCA_014229295.1ContigJAARZL000000000SAMN14390043
FSL L7-0083
GCA_014229245.1ContigJAARZJ000000000SAMN14390045
FSL L7-0091
GCA_014229345.1ContigJAARZO000000000SAMN14390040
FSL L7-0072
GCA_014223335.1ContigJAARQE000000000SAMN14390368
FSL L7-1629
GCA_014223265.1ContigJAARQA000000000SAMN14390372
FSL L7-1641
GCA_014223235.1ContigJAARPY000000000SAMN14390374
FSL L7-1645
GCA_014223665.1ContigJAARRE000000000SAMN14390339
FSL L7-1572
GCA_014226915.1ContigJAARWN000000000SAMN14390161
FSL L7-0741
GCA_014322885.1ContigJAASUG000000000SAMN14390317
FSL L7-1479
GCA_014226885.1ContigJAASVE000000000SAMN14390163
FSL L7-0751
GCA_014223735.1ContigJAASTV000000000SAMN14390336
FSL L7-1558
GCA_014224035.1ContigJAASUF000000000SAMN14390318
FSL L7-1485
GCA_014223915.1ContigJAASUB000000000SAMN14390325
FSL L7-1515
GCA_014223895.1ContigJAASUD000000000SAMN14390323
FSL L7-1509
GCA_014223925.1ContigJAASUC000000000SAMN14390324
FSL L7-1510
GCA_014223685.1ContigJAASTW000000000SAMN14390335
FSL L7-1554
GCA_014322845.1ContigJAASUA000000000SAMN14390326
FSL L7-1517
GCA_014322775.1ContigJAASTU000000000SAMN14390341
FSL L7-1578
GCA_014322765.1ContigJAASTZ000000000SAMN14390327
FSL L7-1519
GCA_014322705.1ContigJAARUM000000000SAMN14390227
FSL L7-1059
GCA_014322685.1ContigJAARUL000000000SAMN14390228
FSL L7-1062
GCA_014322645.1ContigJAARUJ000000000SAMN14390230
FSL L7-1067
GCA_014223405.1ContigJAARQH000000000SAMN14390365
FSL L7-1624
GCA_014223385.1ContigJAARQG000000000SAMN14390366
FSL L7-1625
GCA_014223185.1ContigJAARPV000000000SAMN14390377
FSL L7-1651
GCA_014223075.1ContigJAARPR000000000SAMN14390381
FSL L7-1661
GCA_014223065.1ContigJAARPQ000000000SAMN14390382
FSL L7-1663
GCA_014223025.1ContigJAARPP000000000SAMN14390383
FSL L7-1665
GCA_014223005.1ContigJAARPM000000000SAMN14390386
FSL L7-1675
GCA_014222995.1ContigJAARPN000000000SAMN14390385
FSL L7-1670
GCA_014222985.1ContigJAARPO000000000SAMN14390384
FSL L7-1669
GCA_014222715.1ContigJAARPB000000000SAMN14390399
FSL L7-1726
GCA_014222695.1ContigJAASTQ000000000SAMN14390400
FSL L7-1743
GCA_014226755.1ContigJAARWK000000000SAMN14390169
FSL L7-0796
GCA_014226815.1ContigJAASVB000000000SAMN14390166
FSL L7-0789
GCA_014226805.1ContigJAARWM000000000SAMN14390167
FSL L7-0794
GCA_014226785.1ContigJAARWL000000000SAMN14390168
FSL L7-0795
GCA_014229085.1ContigJAASWU000000000SAMN14390053
FSL L7-0125
GCA_014228445.1ContigJAARXZ000000000SAMN14390085
FSL L7-0280
GCA_014228465.1ContigJAARYA000000000SAMN14390084
FSL L7-0279
GCA_014228415.1ContigJAARXY000000000SAMN14390086
FSL L7-0285
GCA_014228365.1ContigJAARXV000000000SAMN14390089
FSL L7-0297
GCA_014228385.1ContigJAARXX000000000SAMN14390087
FSL L7-0288
GCA_014228355.1ContigJAARXW000000000SAMN14390088
FSL L7-0291
GCA_014228345.1ContigJAARXU000000000SAMN14390090
FSL L7-0303
GCA_014228325.1ContigJAARXT000000000SAMN14390091
FSL L7-0304
GCA_014228275.1ContigJAARXR000000000SAMN14390093
FSL L7-0311
GCA_014228265.1ContigJAARXS000000000SAMN14390092
FSL L7-0309
GCA_014228255.1ContigJAARXP000000000SAMN14390095
FSL L7-0313
GCA_014228245.1ContigJAARXQ000000000SAMN14390094
FSL L7-0312
GCA_014228215.1ContigJAARXO000000000SAMN14390096
FSL L7-0317
GCA_014229675.1ContigJAASAA000000000SAMN14390022
FSL L7-0007
GCA_014229115.1ContigJAARZD000000000SAMN14390051
FSL L7-0121
GCA_014225705.1ContigJAARUR000000000SAMN14390222
FSL L7-1049
GCA_014228195.1ContigJAARXM000000000SAMN14390098
FSL L7-0331
GCA_014228185.1ContigJAARXN000000000SAMN14390097
FSL L7-0329
GCA_014228155.1ContigJAARXK000000000SAMN14390100
FSL L7-0349
GCA_014227905.1ContigJAARXB000000000SAMN14390109
FSL L7-0373
GCA_014228015.1ContigJAARXF000000000SAMN14390105
FSL L7-0368
GCA_014228055.1ContigJAARXG000000000SAMN14390104
FSL L7-0367
GCA_014228045.1ContigJAARXE000000000SAMN14390106
FSL L7-0369
GCA_014228095.1ContigJAARXJ000000000SAMN14390101
FSL L7-0350
GCA_014227645.1ContigJAASWI000000000SAMN14390125
FSL L7-0504
GCA_014227655.1ContigJAASWJ000000000SAMN14390124
FSL L7-0503
GCA_014227425.1ContigJAASWB000000000SAMN14390135
FSL L7-0530
GCA_014227515.1ContigJAASWE000000000SAMN14390132
FSL L7-0523
GCA_014227485.1ContigJAASWG000000000SAMN14390129
FSL L7-0515
GCA_014227465.1ContigJAASWC000000000SAMN14390134
FSL L7-0529
GCA_008269445.1ContigVTHN00000000SAMN12630206
FSL L7-0777
GCA_008269425.1ContigVTHZ00000000SAMN12630194
FSL L7-0662
GCA_008269435.1ContigVTJA00000000SAMN12630167
FSL L7-0479
GCA_008271185.1ContigVTKQ00000000SAMN12630125
FSL L7-0139
GCA_008271175.1ContigVTKP00000000SAMN12630126
FSL L7-0144
GCA_008271165.1ContigVTKN00000000SAMN12630128
FSL L7-0147
GCA_008271105.1ContigVTKK00000000SAMN12630131
FSL L7-0157
GCA_008271095.1ContigVTKR00000000SAMN12630124
FSL L7-0131
GCA_008271085.1ContigVTKM00000000SAMN12630129
FSL L7-0148
GCA_008271075.1ContigVTKO00000000SAMN12630127
FSL L7-0145
GCA_008271065.1ContigVTKB00000000SAMN12630140
FSL L7-0230
GCA_008271005.1ContigVTKS00000000SAMN12630123
FSL L7-0115
GCA_008270995.1ContigVTKF00000000SAMN12630136
FSL L7-0214
GCA_008270985.1ContigVTKT00000000SAMN12630122
FSL L7-0112
GCA_008270975.1ContigVTKC00000000SAMN12630139
FSL L7-0222
GCA_008270965.1ContigVTJW00000000SAMN12630145
FSL L7-0323
GCA_008270905.1ContigVTJY00000000SAMN12630143
FSL L7-0251
GCA_008270915.1ContigVTJL00000000SAMN12630156
FSL L7-0408
GCA_008270895.1ContigVTKE00000000SAMN12630137
FSL L7-0218
GCA_008270885.1ContigVTKA00000000SAMN12630141
FSL L7-0235
GCA_008270865.1ContigVTKU00000000SAMN12630121
FSL L7-0013
GCA_008270805.1ContigVTKD00000000SAMN12630138
FSL L7-0221
GCA_008270815.1ContigVTJO00000000SAMN12630153
FSL L7-0399
GCA_008270785.1ContigVTKJ00000000SAMN12630132
FSL L7-0163
GCA_008270775.1ContigVTJN00000000SAMN12630154
FSL L7-0403
GCA_008270765.1ContigVTJX00000000SAMN12630144
FSL L7-0261
GCA_008270705.1ContigVTJK00000000SAMN12630157
FSL L7-0410
GCA_008270695.1ContigVTJG00000000SAMN12630161
FSL L7-0427
GCA_008270675.1ContigVTJI00000000SAMN12630159
FSL L7-0415
GCA_008270685.1ContigVTKL00000000SAMN12630130
FSL L7-0155
GCA_008270665.1ContigVTKI00000000SAMN12630133
FSL L7-0201
GCA_008270635.1ContigVTJM00000000SAMN12630155
FSL L7-0407
GCA_008270595.1ContigVTJU00000000SAMN12630147
FSL L7-0327
GCA_008270585.1ContigVTIY00000000SAMN12630169
FSL L7-0521
GCA_008270575.1ContigVTIZ00000000SAMN12630168
FSL L7-0487
GCA_008270565.1ContigVTID00000000SAMN12630190
FSL L7-0649
GCA_008270535.1ContigVTJV00000000SAMN12630146
FSL L7-0325
GCA_008270525.1ContigVTIV00000000SAMN12630172
FSL L7-0546
GCA_008270475.1ContigVTIX00000000SAMN12630170
FSL L7-0535
GCA_008270485.1ContigVTIW00000000SAMN12630171
FSL L7-0543
GCA_008270465.1ContigVTJH00000000SAMN12630160
FSL L7-0421
GCA_008270435.1ContigVTIJ00000000SAMN12630184
FSL L7-0633
GCA_008270425.1ContigVTIR00000000SAMN12630176
FSL L7-0602
GCA_008270385.1ContigVTJF00000000SAMN12630162
FSL L7-0437
GCA_008270375.1ContigVTKG00000000SAMN12630135
FSL L7-0213
GCA_008270365.1ContigVTII00000000SAMN12630185
FSL L7-0635
GCA_008270335.1ContigVTIG00000000SAMN12630187
FSL L7-0640
GCA_008270325.1ContigVTJJ00000000SAMN12630158
FSL L7-0411
GCA_008270285.1ContigVTIO00000000SAMN12630179
FSL L7-0625
GCA_008270265.1ContigVTJP00000000SAMN12630152
FSL L7-0379
GCA_008270255.1ContigVTHX00000000SAMN12630196
FSL L7-0669
GCA_008270235.1ContigVTJB00000000SAMN12630166
FSL L7-0471
GCA_008270225.1ContigVTJZ00000000SAMN12630142
FSL L7-0239
GCA_008270185.1ContigVTIM00000000SAMN12630181
FSL L7-0627
GCA_008270175.1ContigVTJS00000000SAMN12630149
FSL L7-0347
GCA_008270155.1ContigVTIL00000000SAMN12630182
FSL L7-0629
GCA_008270145.1ContigVTIF00000000SAMN12630188
FSL L7-0641
GCA_008270115.1ContigVTIC00000000SAMN12630191
FSL L7-0653
GCA_008270085.1ContigVTIP00000000SAMN12630178
FSL L7-0624
GCA_008270075.1ContigVTHW00000000SAMN12630197
FSL L7-0672
GCA_008270065.1ContigVTIE00000000SAMN12630189
FSL L7-0647
GCA_008270025.1ContigVTIT00000000SAMN12630174
FSL L7-0593
GCA_008270035.1ContigVTIQ00000000SAMN12630177
FSL L7-0623
GCA_008269985.1ContigVTIS00000000SAMN12630175
FSL L7-0594
GCA_008269965.1ContigVTHY00000000SAMN12630195
FSL L7-0666
GCA_008269975.1ContigVTJC00000000SAMN12630165
FSL L7-0466
GCA_008269935.1ContigVTHS00000000SAMN12630201
FSL L7-0683
GCA_008269915.1ContigVTHV00000000SAMN12630198
FSL L7-0677
GCA_008269895.1ContigVTHR00000000SAMN12630202
FSL L7-0685
GCA_008269875.1ContigVTIN00000000SAMN12630180
FSL L7-0626
GCA_008269865.1ContigVTJQ00000000SAMN12630151
FSL L7-0375
GCA_008269825.1ContigVTIH00000000SAMN12630186
FSL L7-0639
GCA_008269835.1ContigVTIU00000000SAMN12630173
FSL L7-0551
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FSL L7-0631
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FSL L7-0381
GCA_014227925.1ContigJAARWZ000000000SAMN14390111
FSL L7-0384
GCA_014227885.1ContigJAASWR000000000SAMN14390114
FSL L7-0393
GCA_014227865.1ContigJAARWX000000000SAMN14390113
FSL L7-0387
GCA_014322595.1ContigJAARUG000000000SAMN14390233
FSL L7-1070
GCA_014322515.1ContigJAARUD000000000SAMN14390236
FSL L7-1073
GCA_014322405.1ContigJAARRA000000000SAMN14390345
FSL L7-1584
GCA_014322365.1ContigJAARQZ000000000SAMN14390346
FSL L7-1585
GCA_014322325.1ContigJAARQW000000000SAMN14390350
FSL L7-1590
GCA_014322295.1ContigJAARQX000000000SAMN14390348
FSL L7-1587
GCA_014322275.1ContigJAARQV000000000SAMN14390351
FSL L7-1591
SRA Data Details
ParameterValue
Data volume, Gbases167
Data volume, Mbytes80492

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