BioProject

The common cuckoo is an iconic brood parasite that has long been identified as an evolutionary model system to study co-evolutionary arms race dynamics between hosts and parasites. More...

The common cuckoo is an iconic brood parasite that has long been identified as an evolutionary model system to study co-evolutionary arms race dynamics between hosts and parasites. This assembly has been produced as part of the G10K-VGP and B10K projects. Sequencing was conducted with PacBio long reads, Bionano optical maps, and 10X Genomics linked reads at the Rockefeller University Vertebrate Genomes Lab led by Olivier Fedrigo, HiC at Arima Genomics, and Illumina sequencing. Genome assembly was conducted by Bettina Haase, and supervised by Arang Rhie, using the VGP 1.5 pipeline. The primary haplotype was assembled to chromosomes, whereas the alternate as contigs only. Genome coordination and funding was by Jochen Wolf and Tom Gilbert. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/data-use-policies/ Less...