To assess the quality of long read sequencing for de novo genome assembly, raw sequence read data for Escherichia coli and for Drosophila ananassae were generated across multiple sequencing platforms and library preps: PacBio RS II, PacBio Sequel II, PacBio HiFi, Oxford Nanopore Technologies MinION rapid ligation, Oxford Nanopore Technologies MinION extended ligation, and Illumina paired end.
| Accession | PRJNA602597 |
| Data Type | Genome sequencing and assembly |
| Scope | Multispecies |
| Publications | Tvedte ES et al., "Comparison of long-read sequencing technologies in interrogating bacteria and fly genomes.", G3 (Bethesda), 2021 Jun 17;11(6) |
| Grants | - "Technology Core" (Grant ID U19 AI110820, National Institute of Allergy and Infectious Diseases Extramural Activities)
|
| Submission | Registration date: 22-Jan-2020
University of Maryland, Baltimore |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 11 |
| WGS master | 1 |
| Genomic DNA | 3 |
| SRA Experiments | 27 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 6 |
| Assembly | 2 |
Related Project Category: RefseqGenbank
PRJNA765704 : Drosophila ananassae RefSeq Raw sequence reads