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Accession: PRJNA641352 ID: 641352

AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants (thale cress)

See Genome Information for Arabidopsis thaliana
Heritable changes in cytosine methylation can arise stochastically in plant genomes independently of DNA sequence alterations. More...
AccessionPRJNA641352; GEO: GSE153055
Data TypeEpigenomics
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsShahryary Y et al., "AlphaBeta: computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants.", Genome Biol, 2020 Oct 6;21(1):260
SubmissionRegistration date: 23-Jun-2020
Genetics, University of Georgia
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments13
Publications
PubMed1
PMC1
Other datasets
BioSample13
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1666
SRA Data Details
ParameterValue
Data volume, Gbases63
Data volume, Mbytes28728

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