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Accession: PRJNA659726 ID: 659726

Gene expression profiles of CD105pos and CD105neg cancer-associated fibroblasts (CAFs) from KPC mice (house mouse)

See Genome Information for Mus musculus
CD105pos and CD105neg CAFs were isolated from KPC pancreatic ductal adenocarcinoma tumours and gene expression profiles measured Overall design: Single live LINnegPDPNposCD90posCD105pos and CD105neg CAFs were FACS isolated from n=6 different KPC pancreatic ductal adenocarcinoma tumours, RNA isolated and gene expresion measured by next gen sequencing using standard methods
AccessionPRJNA659726; GEO: GSE156985
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsHutton C et al., "Single-cell analysis defines a pancreatic fibroblast lineage that supports anti-tumor immunity.", Cancer Cell, 2021 Sep 13;39(9):1227-1244.e20
SubmissionRegistration date: 27-Aug-2020
System Oncology, Cancer Research UK Manchester Institute
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases45
Data volume, Mbytes17041

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