hot springs metagenome (ID 673998) - BioProject

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Accession: PRJNA673998 ID: 673998

hot springs metagenome

Metagenomic analysis of Khirganga hot spring, Northern Himalayas, India

Presence of microbial communities in different habitats of Khirganga hot spring.

Functional profiling and sulfur-reducing potential in all three habitats of the hot spring

Accession	PRJNA673998
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	hot springs metagenome[Taxonomy ID: 433727] unclassified sequences; metagenomes; ecological metagenomes; hot springs metagenome
Submission	Registration date: 2-Oct-2021 University of Delhi
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	41
SRA Experiments	17
Other datasets
BioSample	52
Assembly	41

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

41
41

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_020216845.1	JAIWNK000000000	SAMN16861146	M38	Anaerolinea sp.
GCA_020217345.1	JAIWOO000000000	SAMN17050106	W247	Armatimonadota bacterium
GCA_020217215.1	JAIWNW000000000	SAMN16863471	W1106	Armatimonadota bacterium
GCA_020217185.1	JAIWNX000000000	SAMN16863472	W46	Asticcacaulis sp.
GCA_020216825.1	JAIWNL000000000	SAMN16861147	M1	Buttiauxella noackiae
GCA_020217145.1	JAIWNY000000000	SAMN16863473	W113	Caenispirillum bisanense
GCA_020217205.1	JAIWNZ000000000	SAMN16863474	W191	Caenispirillum sp.
GCA_020217365.1	JAIWOP000000000	SAMN17050107	W191	Calditerrivibrio sp.
GCA_020217115.1	JAIWOA000000000	SAMN16863475	W28	Calditerrivibrio sp.
GCA_020216865.1	JAIWNM000000000	SAMN16861148	M29	Calditerrivibrio sp.
GCA_020216745.1	JAIWNQ000000000	SAMN16861152	M98	Candidatus Hydrogenedens sp.
GCA_020216645.1	JAIUXZ000000000	SAMN16861451	S243	Candidatus Nitrosotenuis sp.
GCA_020217065.1	JAIWOB000000000	SAMN16863476	W56	Chloroflexota bacterium
GCA_020216565.1	JAIUYD000000000	SAMN16861447	S239	Chloroflexota bacterium
GCA_020216575.1	JAIUYC000000000	SAMN16861448	S288	Coleofasciculus sp. S288
GCA_020217105.1	JAIWOC000000000	SAMN16863477	W148	Cyanobacteria bacterium KgW148
GCA_020217075.1	JAIWOD000000000	SAMN16863478	W35	Dechloromonas sp.
GCA_020216625.1	JAIUYB000000000	SAMN16861449	S21	Desulfarculus sp.
GCA_020216805.1	JAIWNN000000000	SAMN16861149	M71	Desulfarculus sp.
GCA_020216785.1	JAIWNO000000000	SAMN16861150	M47	Desulfomonile sp.
GCA_020217325.1	JAIWOQ000000000	SAMN17050108	W223	Desulfovibrio sp.
GCA_020217165.1	JAIWOE000000000	SAMN16863479	W18	Desulfovibrio sp.
GCA_020216725.1	JAIWNP000000000	SAMN16861151	M19	Flavobacterium piscis
GCA_020217025.1	JAIWOF000000000	SAMN16863480	W57	Flavobacterium sp.
GCA_020217305.1	JAIWOR000000000	SAMN17050109	W211	Hyphomicrobiales bacterium
GCA_020216945.1	JAIWOK000000000	SAMN16863485	W166	Hyphomicrobiales bacterium
GCA_020216605.1	JAIUYA000000000	SAMN16861450	S72	Ignavibacterium sp.
GCA_020217285.1	JAIWNJ000000000	SAMN16925408	M142	Klebsiella quasipneumoniae
GCA_020216755.1	JAIWNR000000000	SAMN16861153	M45	Klebsiella quasipneumoniae
GCA_020217035.1	JAIWOG000000000	SAMN16863481	W65	Magnetospirillum sp.
GCA_020216685.1	JAIWNS000000000	SAMN16861154	M59	Methanospirillum hungatei
GCA_020216895.1	JAIWOM000000000	SAMN16863487	W128	Microcella sp.
GCA_020216985.1	JAIWOH000000000	SAMN16863482	W63	Nitrospira sp.
GCA_020216965.1	JAIWOJ000000000	SAMN16863484	W1111	Prosthecobacter sp.
GCA_020217005.1	JAIWOI000000000	SAMN16863483	W122	Rheinheimera sp.
GCA_020217245.1	JAIWNV000000000	SAMN16863470	W8	Rhizobium sp.
GCA_020216695.1	JAIWNT000000000	SAMN16861155	M101	Shewanella putrefaciens
GCA_020216925.1	JAIWOL000000000	SAMN16863486	W96	Thiobacillus sp.
GCA_020217265.1	JAIWOS000000000	SAMN17050110	W21	Thiobacillus sp.
GCA_020216655.1	JAIWNU000000000	SAMN16861156	M74	Treponema sp.
GCA_020216885.1	JAIWON000000000	SAMN16863488	W26	Zymomonas sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	84
Data volume, Mbytes	35682

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hot springs metagenome

Metagenomic analysis of Khirganga hot spring, Northern Himalayas, India

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