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Accession: PRJNA717118 ID: 717118

Campylobacter

Campylobacter jejuni and Campylobacter coli multi-resistant clinical isolates

Analyze of multi-resistant Campylobacter french clinical isolates from 2016 to 2019 in order to identify associated resistance mechanisms.
AccessionPRJNA717118
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 25-Mar-2021
CHU de Bordeaux
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)59
Other datasets
BioSample59
Assembly59
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
59
59
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_018727355.1ContigJAGJFA000000000SAMN18478595
2019/0633
Campylobacter coli
GCA_018727385.1ContigJAGJFB000000000SAMN18478594
2019/0587
Campylobacter coli
GCA_018727345.1ContigJAGJGD000000000SAMN18478596
2019/0648
Campylobacter coli
GCA_018727325.1ContigJAGJGC000000000SAMN18478597
2019/0716
Campylobacter coli
GCA_018727285.1ContigJAGJEX000000000SAMN18478600
2019/0916h
Campylobacter coli
GCA_018727275.1ContigJAGJEZ000000000SAMN18478598
2019/0736
Campylobacter coli
GCA_018727265.1ContigJAGJEY000000000SAMN18478599
2019/0773
Campylobacter coli
GCA_018727245.1ContigJAGJGB000000000SAMN18478601
2019/0973H
Campylobacter coli
GCA_018728125.1ContigJAGJFW000000000SAMN18478615
2016/0429H
Campylobacter coli
GCA_018728105.1ContigJAGJFV000000000SAMN18478617
2016/2392
Campylobacter coli
GCA_018728085.1ContigJAGJGS000000000SAMN18478618
2017/0180
Campylobacter coli
GCA_018728065.1ContigJAGJGT000000000SAMN18478616
2016/0940
Campylobacter coli
GCA_018728045.1ContigJAGJGR000000000SAMN18478573
2018/0030H
Campylobacter coli
GCA_018728025.1ContigJAGJFU000000000SAMN18478574
2018/0065H
Campylobacter coli
GCA_018727975.1ContigJAGJFT000000000SAMN18478575
2018/0187
Campylobacter coli
GCA_018727955.1ContigJAGJFS000000000SAMN18478576
2018/0417H
Campylobacter coli
GCA_018727855.1ContigJAGJGM000000000SAMN18478580
2018/1021H
Campylobacter coli
GCA_018727885.1ContigJAGJFR000000000SAMN18478578
2018/0590H
Campylobacter coli
GCA_018727845.1ContigJAGJGN000000000SAMN18478579
2018/0857H
Campylobacter coli
GCA_018727915.1ContigJAGJGO000000000SAMN18478577
2018/0534H
Campylobacter coli
GCA_018727825.1ContigJAGJFP000000000SAMN18478581
2018/1062
Campylobacter coli
GCA_018727765.1ContigJAGJFN000000000SAMN18478582
2018/2008
Campylobacter coli
GCA_018727745.1ContigJAGJFM000000000SAMN18478583
2018/2034
Campylobacter coli
GCA_018727725.1ContigJAGJFL000000000SAMN18478584
2018/2141
Campylobacter coli
GCA_018727705.1ContigJAGJGK000000000SAMN18478585
2018/2195
Campylobacter coli
GCA_018727645.1ContigJAGJFJ000000000SAMN18478587
2018/2656
Campylobacter coli
GCA_018727655.1ContigJAGJFK000000000SAMN18478586
2018/2289
Campylobacter coli
GCA_018727625.1ContigJAGJFI000000000SAMN18478588
2018/2697
Campylobacter coli
GCA_018727595.1ContigJAGJFH000000000SAMN18478589
2019/0051
Campylobacter coli
GCA_018727545.1ContigJAGJFF000000000SAMN18478591
2019/0191
Campylobacter coli
GCA_018727565.1ContigJAGJFG000000000SAMN18478590
2019/0079h
Campylobacter coli
GCA_018727525.1ContigJAGJGH000000000SAMN18478624
2019/0231H
Campylobacter coli
GCA_018727495.1ContigJAGJGF000000000SAMN18478621
2019/0231H/0191
Campylobacter coli
GCA_018727485.1ContigJAGJFE000000000SAMN18478592
2019/0242H
Campylobacter coli
GCA_018727465.1ContigJAGJFD000000000SAMN18478593
2019/0320H
Campylobacter coli
GCA_018727445.1ContigJAGJGG000000000SAMN18478620
2019/0231H/0051
Campylobacter coli
GCA_018727785.1ContigJAGJFO000000000SAMN18478619
2018/1149
Campylobacter coli
GCA_018727145.1ContigJAGJEV000000000SAMN18478603
2019/1720
Campylobacter coli
GCA_018727115.1ContigJAGJEU000000000SAMN18478604
2019/1832
Campylobacter coli
GCA_018727085.1ContigJAGJEW000000000SAMN18478602
2019/1612
Campylobacter coli
GCA_018727045.1ContigJAGJET000000000SAMN18478605
2019/1855
Campylobacter coli
GCA_018726995.1ContigJAGJEQ000000000SAMN18478608
2019/2005
Campylobacter coli
GCA_018727025.1ContigJAGJES000000000SAMN18478606
2019/1859
Campylobacter coli
GCA_018726965.1ContigJAGJER000000000SAMN18478607
2019/2001
Campylobacter coli
GCA_018726975.1ContigJAGJEP000000000SAMN18478609
2019/2160
Campylobacter coli
GCA_018726935.1ContigJAGJFY000000000SAMN18478611
2019/2475
Campylobacter coli
GCA_018726925.1ContigJAGJFZ000000000SAMN18478610
2019/2258
Campylobacter coli
GCA_018726905.1ContigJAGJEO000000000SAMN18478612
2019/2562
Campylobacter coli
GCA_018726875.1ContigJAGJFX000000000SAMN18478613
2019/2832
Campylobacter coli
GCA_018726865.1ContigJAGJEN000000000SAMN18478614
2019/2879
Campylobacter coli
GCA_018727425.1ContigJAGJFC000000000SAMN18478570
2019/0511H
Campylobacter jejuni
GCA_018727585.1ContigJAGJGI000000000SAMN18478569
2019/0207
Campylobacter jejuni
GCA_018727665.1ContigJAGJGJ000000000SAMN18478568
2018/2533
Campylobacter jejuni
GCA_018727795.1ContigJAGJGL000000000SAMN18478567
2018/1793
Campylobacter jejuni
GCA_018727905.1ContigJAGJFQ000000000SAMN18478566
2018/0843H
Campylobacter jejuni
GCA_018727945.1ContigJAGJGP000000000SAMN18478565
2018/0116
Campylobacter jejuni
GCA_018727985.1ContigJAGJGQ000000000SAMN18478564
2018/0061H
Campylobacter jejuni
GCA_018727205.1ContigJAGJGA000000000SAMN18478572
2019/1193
Campylobacter jejuni
GCA_018727395.1ContigJAGJGE000000000SAMN18478571
2019/0557H
Campylobacter jejuni

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