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Accession: PRJNA753842 ID: 753842

Ceratopteris richardii isolate:Whitten #5841 | cultivar:Hn-n

Ceratopteris richardii Hn-n (M.Whitten #5841) Genome sequencing and assembly and transcriptomics

The Open Green Genomes (OGG) project aims to collaborate with the DOE JGI Community Science Program to sequence plant genomes sampled across land plants in order to fill phylogenetic sampling gaps among JGI Plant Flagship and other green plant genomes.

This is an umbrella BioProject for Ceratopteris richardii Hn-n (M.Whitten #5841) Genome sequencing and assembly and transcriptomics.

AccessionPRJNA753842
TypeUmbrella project
SubmissionRegistration date: 11-Aug-2021
DOE Joint Genome Institute
Related Resources
RelevanceEnvironmental
Locus Tag PrefixK3889
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10812
WGS master1
SRA Experiments257
Protein Sequences75211
Other datasets
BioSample29
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases6,207
Data volume, Tbytes1.99
Ceratopteris richardii isolate:Whitten #5841 | cultivar:Hn-n encompasses the following 14 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

1
1
2
BioProject
accession
Assembly
level
OrganismTitle
PRJNA581960 SRA or TraceCeratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Standard Draft (DOE Joint Genome Institute)
PRJNA729743 ChromosomesCeratopteris richardiiCeratopteris richardii isolate:Whitten #5841 | cultivar:Hn-n Genome sequencing and assembly (Open Green Genomes Project)
transcriptome12
BioProject
accession
OrganismTitle
PRJNA651768Ceratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Transcriptome - Sori (DOE Joint Genome Institute)
PRJNA651770Ceratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Transcriptome - Immature gametophyte (DOE Joint Genome Institute)
PRJNA651764Ceratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Transcriptome - Developing leaf (DOE Joint Genome Institute)
PRJNA651765Ceratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Transcriptome - Expanding leaf (DOE Joint Genome Institute)
PRJNA651766Ceratopteris richardiiCeratopteris richardii Hn-n (M.Whitten #5841) Transcriptome - Sterile leaf (DOE Joint Genome Institute)
List all 12 'transcriptome' projects...

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