Escherichia coli (ID 774259) - BioProject

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Accession: PRJNA774259 ID: 774259

Escherichia coli

GenomeTrakr Project: NJ Department of Agriculture, Animal Health Diagnostic Laboratory

See Genome Information for Escherichia coli

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This project is a component of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp.

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52 additional projects are components of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp..

9409 additional projects are related by organism.

Whole-genome sequencing of cultured Escherichia coli as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA774259
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Submission	Registration date: 30-Dec-2021 New Jersey Department of Agriculture
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	190
SRA Experiments	198
Other datasets
BioSample	198
Assembly	190

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

183
183

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_022937005.1	ABFSBX000000000	SAMN27063190	NJDA-WGS-062	Escherichia coli
GCA_022435965.1	ABFGMP000000000	SAMN26343936	NJDA-WGS-014	Escherichia coli
GCA_022435975.1	ABFGMO000000000	SAMN26343935	NJDA-WGS-041	Escherichia coli
GCA_022475415.1	ABFHIU000000000	SAMN26419999	NJDA-WGS-043	Escherichia coli
GCA_022475275.1	ABFHIO000000000	SAMN26419996	NJDA-WGS-047	Escherichia coli
GCA_022474995.1	ABFHIB000000000	SAMN26419995	NJDA-WGS-048	Escherichia coli
GCA_022474955.1	ABFHIA000000000	SAMN26419998	NJDA-WGS-045	Escherichia coli
GCA_022474895.1	ABFHHV000000000	SAMN26419994	NJDA-WGS-051	Escherichia coli
GCA_022474835.1	ABFHHW000000000	SAMN26419997	NJDA-WGS-046	Escherichia coli
GCA_021337655.2	ABEMRT000000000	SAMN24526509	NJDA_WGS_020	Escherichia coli
GCA_021337495.2	ABEMRP000000000	SAMN24526497	NJDA_WGS_009	Escherichia coli
GCA_021337915.2	ABEMSJ000000000	SAMN24526495	NJDA_WGS_015	Escherichia coli
GCA_021337975.2	ABEMSP000000000	SAMN24526491	NJDA_WGS_004	Escherichia coli
GCA_021337835.2	ABEMSE000000000	SAMN24526498	NJDA_WGS_010	Escherichia coli
GCA_021337815.2	ABEMSH000000000	SAMN24526499	NJDA_WGS_008	Escherichia coli
GCA_021337855.2	ABEMSD000000000	SAMN24526496	NJDA_WGS_007	Escherichia coli
GCA_021337635.2	ABEMSC000000000	SAMN24526507	NJDA_WGS_025	Escherichia coli
GCA_021337955.2	ABEMSL000000000	SAMN24526508	NJDA_WGS_024	Escherichia coli
GCA_021337935.2	ABEMSN000000000	SAMN24526506	NJDA_WGS_023	Escherichia coli
GCA_021337675.2	ABEMRU000000000	SAMN24526505	NJDA_WGS_022	Escherichia coli
GCA_021337595.2	ABEMRZ000000000	SAMN24526502	NJDA_WGS_018	Escherichia coli
GCA_021337895.2	ABEMSA000000000	SAMN24526494	NJDA_WGS_016	Escherichia coli
GCA_021337795.2	ABEMSM000000000	SAMN24526503	NJDA_WGS_027	Escherichia coli
GCA_021337555.2	ABEMRW000000000	SAMN24526500	NJDA_WGS_011	Escherichia coli
GCA_021337715.2	ABEMRX000000000	SAMN24526510	NJDA_WGS_028	Escherichia coli
GCA_021337735.2	ABEMSF000000000	SAMN24526493	NJDA_WGS_017	Escherichia coli
GCA_021337615.2	ABEMRY000000000	SAMN24526504	NJDA_WGS_021	Escherichia coli
GCA_021337475.2	ABEMRQ000000000	SAMN24526501	NJDA_WGS_012	Escherichia coli
GCA_021337695.2	ABEMSB000000000	SAMN24526492	NJDA_WGS_013	Escherichia coli
GCA_021337775.2	ABEMSK000000000	SAMN24526490	NJDA_WGS_005	Escherichia coli
GCA_023563325.1	ABGJXW000000000	SAMN28684367	NJDA-WGS-070	Escherichia coli
GCA_023564005.1	ABGJZC000000000	SAMN28684365	NJDA-WGS-066	Escherichia coli
GCA_023562765.1	ABGJWT000000000	SAMN28684369	NJDA-WGS-104	Escherichia coli
GCA_023563165.1	ABGJXP000000000	SAMN28684366	NJDA-WGS-068	Escherichia coli
GCA_023563145.1	ABGJXJ000000000	SAMN28684368	NJDA-WGS-071	Escherichia coli
GCA_023173015.1	ABFZAX000000000	SAMN27920850	NJDA-WGS-036	Escherichia coli
GCA_023171195.1	ABFYXE000000000	SAMN27920846	NJDA-WGS-078	Escherichia coli
GCA_023162305.1	ABFYQC000000000	SAMN27920847	NJDA-WGS-076	Escherichia coli
GCA_023162285.1	ABFYQA000000000	SAMN27920845	NJDA-WGS-080	Escherichia coli
GCA_023162265.1	ABFYQE000000000	SAMN27920849	NJDA-WGS-073	Escherichia coli
GCA_023344655.1	ABGDXT000000000	SAMN28195090	NJDA-WGS-049	Escherichia coli
GCA_023345185.1	ABGDYW000000000	SAMN28194716	NJDA-WGS-085	Escherichia coli
GCA_023341775.1	ABGDTZ000000000	SAMN28195088	NJDA-WGS-042	Escherichia coli
GCA_023341875.1	ABGDUA000000000	SAMN28195091	NJDA-WGS-050	Escherichia coli
GCA_023338715.1	ABGDST000000000	SAMN28195089	NJDA-WGS-044	Escherichia coli
GCA_023462995.1	ABGGBF000000000	SAMN27920848	NJDA-WGS-075	Escherichia coli
GCA_022401085.1	ABFFOC000000000	SAMN26263540	NJDA-WGS-032	Escherichia coli
GCA_022401745.1	ABFFPC000000000	SAMN26263541	NJDA-WGS-030	Escherichia coli
GCA_022401585.1	ABFFOM000000000	SAMN26263542	NJDA-WGS-029	Escherichia coli
GCA_022401565.1	ABFFOW000000000	SAMN26263539	NJDA-WGS-039	Escherichia coli
GCA_022401525.1	ABFFOO000000000	SAMN26263538	NJDA-WGS-052	Escherichia coli
GCA_022401505.1	ABFFON000000000	SAMN26263537	NJDA-WGS-053	Escherichia coli
GCA_030891265.1	ABLQSZ000000000	SAMN34268738	NJDA-WGS-181	Escherichia coli
GCA_030891245.1	ABLQSX000000000	SAMN34268737	NJDA-WGS-180	Escherichia coli
GCA_030891225.1	ABLQSW000000000	SAMN34268735	NJDA-WGS-178	Escherichia coli
GCA_030891205.1	ABLQSV000000000	SAMN34268736	NJDA-WGS-179	Escherichia coli
GCA_030891185.1	ABLQSU000000000	SAMN34268734	NJDA-WGS-174	Escherichia coli
GCA_031556945.1	ABMLCV000000000	SAMN37408346	NJDA-WGS-243	Escherichia coli
GCA_031556895.1	ABMLCW000000000	SAMN37408344	NJDA-WGS-241	Escherichia coli
GCA_031556875.1	ABMLCX000000000	SAMN37408342	NJDA-WGS-239	Escherichia coli
GCA_031556855.1	ABMLCU000000000	SAMN37408341	NJDA-WGS-238	Escherichia coli
GCA_031555275.1	ABMLBW000000000	SAMN37408343	NJDA-WGS-240	Escherichia coli
GCA_031555235.1	ABMLBV000000000	SAMN37408340	NJDA-WGS-237	Escherichia coli
GCA_031563075.1	ABMLOE000000000	SAMN37408345	NJDA-WGS-242	Escherichia coli
GCA_034562695.1	ABPOQD000000000	SAMN39080179	NJDA-WGS-278	Escherichia coli
GCA_034562675.1	ABPOQC000000000	SAMN39080178	NJDA-WGS-280	Escherichia coli
GCA_034562635.1	ABPOQB000000000	SAMN39080177	NJDA-WGS-281	Escherichia coli
GCA_034298175.1	ABPJUZ000000000	SAMN38765486	NJDA-WGS-265	Escherichia coli
GCA_034298145.1	ABPJVE000000000	SAMN38765487	NJDA-WGS-267	Escherichia coli
GCA_034298215.1	ABPJVF000000000	SAMN38765488	NJDA-WGS-269	Escherichia coli
GCA_032830275.1	ABOBLB000000000	SAMN35734406	NJDA-WGS-229	Escherichia coli
GCA_032830235.1	ABOBKX000000000	SAMN35734404	NJDA-WGS-200	Escherichia coli
GCA_032830215.1	ABOBKY000000000	SAMN35734403	NJDA-WGS-215	Escherichia coli
GCA_032830195.1	ABOBLA000000000	SAMN35734405	NJDA-WGS-220	Escherichia coli
GCA_037077075.1	ABQPSX000000000	SAMN40323832	NJDA-WGS-300	Escherichia coli
GCA_037077175.1	ABQPSZ000000000	SAMN40323836	NJDA-WGS-304	Escherichia coli
GCA_037077135.1	ABQPSY000000000	SAMN40323831	NJDA-WGS-297	Escherichia coli
GCA_037078185.1	ABQPVA000000000	SAMN40323837	NJDA-WGS-305	Escherichia coli
GCA_037078135.1	ABQPUZ000000000	SAMN40323830	NJDA-WGS-296	Escherichia coli
GCA_037077055.1	ABQPSU000000000	SAMN40323829	NJDA-WGS-295	Escherichia coli
GCA_037077675.1	ABQPTZ000000000	SAMN40323835	NJDA-WGS-303	Escherichia coli
GCA_037077635.1	ABQPTY000000000	SAMN40323834	NJDA-WGS-302	Escherichia coli
GCA_037077595.1	ABQPTX000000000	SAMN40323833	NJDA-WGS-301	Escherichia coli
GCA_037121665.1	ABQRAT000000000	SAMN40420786	NJDA-WGS-282	Escherichia coli
GCA_037373285.1	ABQTOG000000000	SAMN35734123	NJDA-WGS-195	Escherichia coli
GCA_037373375.1	ABQTOI000000000	SAMN35734138	NJDA-WGS-232	Escherichia coli
GCA_037373315.1	ABQTOH000000000	SAMN35734114	NJDA-WGS-184	Escherichia coli
GCA_037353345.1	ABQTMQ000000000	SAMN35734120	NJDA-WGS-190	Escherichia coli
GCA_037353285.1	ABQTMP000000000	SAMN35734124	NJDA-WGS-196	Escherichia coli
GCA_037353325.1	ABQTMR000000000	SAMN35734118	NJDA-WGS-188	Escherichia coli
GCA_037353265.1	ABQTMS000000000	SAMN35734130	NJDA-WGS-207	Escherichia coli
GCA_037355665.1	ABQTNE000000000	SAMN35734137	NJDA-WGS-227	Escherichia coli
GCA_037355635.1	ABQTNG000000000	SAMN35734117	NJDA-WGS-187	Escherichia coli
GCA_037355685.1	ABQTNH000000000	SAMN35734119	NJDA-WGS-189	Escherichia coli
GCA_037355595.1	ABQTNF000000000	SAMN35734115	NJDA-WGS-185	Escherichia coli
GCA_037355705.1	ABQTNJ000000000	SAMN35734121	NJDA-WGS-191	Escherichia coli
GCA_037355535.1	ABQTNC000000000	SAMN35734135	NJDA-WGS-211	Escherichia coli
GCA_037355445.1	ABQTNB000000000	SAMN35734122	NJDA-WGS-116	Escherichia coli
GCA_037355515.1	ABQTND000000000	SAMN35734136	NJDA-WGS-213	Escherichia coli
GCA_037363185.1	ABQTNS000000000	SAMN35734116	NJDA-WGS-186	Escherichia coli
GCA_037363105.1	ABQTNQ000000000	SAMN35734133	NJDA-WGS-209	Escherichia coli
GCA_037363085.1	ABQTNR000000000	SAMN35734134	NJDA-WGS-210	Escherichia coli
GCA_037363065.1	ABQTNP000000000	SAMN35734128	NJDA-WGS-202	Escherichia coli
GCA_037364125.1	ABQTOC000000000	SAMN35734113	NJDA-WGS-183	Escherichia coli
GCA_037364145.1	ABQTOD000000000	SAMN35734132	NJDA-WGS-208	Escherichia coli
GCA_037362945.1	ABQTNO000000000	SAMN35734112	NJDA-WGS-182	Escherichia coli
GCA_040528685.1	ABTIRN000000000	SAMN42335919	NJDA-WGS-354	Escherichia coli
GCA_040521845.1	ABTIEK000000000	SAMN42335928	NJDA-WGS-124	Escherichia coli
GCA_040521905.1	ABTIEL000000000	SAMN42335930	NJDA-WGS-126	Escherichia coli
GCA_040521885.1	ABTIEJ000000000	SAMN42335929	NJDA-WGS-125	Escherichia coli
GCA_040521785.1	ABTIEE000000000	SAMN42335922	NJDA-WGS-357	Escherichia coli
GCA_040521765.1	ABTIED000000000	SAMN42335923	NJDA-WGS-358	Escherichia coli
GCA_040521745.1	ABTIEC000000000	SAMN42335921	NJDA-WGS-356	Escherichia coli
GCA_040521725.1	ABTIDZ000000000	SAMN42335918	NJDA-WGS-353	Escherichia coli
GCA_040521705.1	ABTIEB000000000	SAMN42335916	NJDA-WGS-307	Escherichia coli
GCA_040521685.1	ABTIEA000000000	SAMN42335920	NJDA-WGS-355	Escherichia coli
GCA_040521665.1	ABTIDY000000000	SAMN42335917	NJDA-WGS-308	Escherichia coli
GCA_040522485.1	ABTIFN000000000	SAMN42335925	NJDA-WGS-117	Escherichia coli
GCA_040522305.1	ABTIFE000000000	SAMN42335927	NJDA-WGS-123	Escherichia coli
GCA_040522265.1	ABTIFC000000000	SAMN42335915	NJDA-WGS-306	Escherichia coli
GCA_040522285.1	ABTIFD000000000	SAMN42335924	NJDA-WGS-359	Escherichia coli
GCA_043802015.1	ABVZUF000000000	SAMN44406901	NJDA-WGS-378	Escherichia coli
GCA_043794105.1	ABVZST000000000	SAMN44406903	NJDA-WGS-380	Escherichia coli
GCA_043804375.1	ABVZUW000000000	SAMN44406900	NJDA-WGS-377	Escherichia coli
GCA_043804245.1	ABVZUV000000000	SAMN44406899	NJDA-WGS-376	Escherichia coli
GCA_043804205.1	ABVZUT000000000	SAMN44406897	NJDA-WGS-374	Escherichia coli
GCA_044914045.1	ABWJMD000000000	SAMN44740632	NJDA_WGS_388	Escherichia coli
GCA_044916525.1	ABWJMP000000000	SAMN44740627	NJDA_WGS_382	Escherichia coli
GCA_044914025.1	ABWJMC000000000	SAMN44740631	NJDA_WGS_387	Escherichia coli
GCA_044914005.1	ABWJMA000000000	SAMN44740629	NJDA_WGS_385	Escherichia coli
GCA_044913955.1	ABWJMB000000000	SAMN44740630	NJDA_WGS_386	Escherichia coli
GCA_044913935.1	ABWJLZ000000000	SAMN44740628	NJDA_WGS_383	Escherichia coli
GCA_044916885.1	ABWJMS000000000	SAMN44740626	NJDA_WGS_381	Escherichia coli
GCA_043711745.1	ABVZQO000000000	SAMN44406902	NJDA-WGS-379	Escherichia coli
GCA_043711685.1	ABVZQN000000000	SAMN44406898	NJDA-WGS-375	Escherichia coli
GCA_028592645.2	ABKOUP000000000	SAMN33244372	NJDA-WGS-132	Escherichia coli
GCA_029647705.1	ABLKVF000000000	SAMN33310627	NJDA-WGS-173	Escherichia coli
GCA_028645425.1	ABKQSS000000000	SAMN33310626	NJDA-WGS-133	Escherichia coli
GCA_028641915.1	ABKQNN000000000	SAMN33310632	NJDA-WGS-165	Escherichia coli
GCA_028641865.1	ABKQNP000000000	SAMN33310631	NJDA-WGS-166	Escherichia coli
GCA_028644905.1	ABKQSM000000000	SAMN33310629	NJDA-WGS-171	Escherichia coli
GCA_028644405.1	ABKQRY000000000	SAMN33310634	NJDA-WGS-137	Escherichia coli
GCA_028644385.1	ABKQRX000000000	SAMN33310630	NJDA-WGS-167	Escherichia coli
GCA_028643655.1	ABKQQQ000000000	SAMN33310628	NJDA-WGS-170	Escherichia coli
GCA_028643345.1	ABKQQB000000000	SAMN33310633	NJDA-WGS-164	Escherichia coli
GCA_028592785.1	ABKOUQ000000000	SAMN33244375	NJDA-WGS-136	Escherichia coli
GCA_028592725.1	ABKOUT000000000	SAMN33244376	NJDA-WGS-141	Escherichia coli
GCA_028592705.1	ABKOUR000000000	SAMN33244377	NJDA-WGS-153	Escherichia coli
GCA_028592665.1	ABKOUS000000000	SAMN33244373	NJDA-WGS-134	Escherichia coli
GCA_028592625.1	ABKOUO000000000	SAMN33244374	NJDA-WGS-135	Escherichia coli
GCA_028592605.1	ABKOUN000000000	SAMN33244371	NJDA-WGS-131	Escherichia coli
GCA_028115825.1	ABKHTO000000000	SAMN32880381	NJDA-WGS-162	Escherichia coli
GCA_028115845.1	ABKHTP000000000	SAMN32880366	NJDA-WGS-145	Escherichia coli
GCA_028115805.1	ABKHTM000000000	SAMN32880372	NJDA-WGS-151	Escherichia coli
GCA_028115785.1	ABKHTN000000000	SAMN32880378	NJDA-WGS-159	Escherichia coli
GCA_028115745.1	ABKHTK000000000	SAMN32880370	NJDA-WGS-149	Escherichia coli
GCA_028115765.1	ABKHTL000000000	SAMN32880369	NJDA-WGS-148	Escherichia coli
GCA_028115725.1	ABKHTJ000000000	SAMN32880367	NJDA-WGS-146	Escherichia coli
GCA_028134845.1	ABKIFV000000000	SAMN32880358	NJDA-WGS-128	Escherichia coli
GCA_028135095.1	ABKIFZ000000000	SAMN32880363	NJDA-WGS-142	Escherichia coli
GCA_028135005.1	ABKIFY000000000	SAMN32880361	NJDA-WGS-139	Escherichia coli
GCA_028134985.1	ABKIFX000000000	SAMN32880380	NJDA-WGS-161	Escherichia coli
GCA_028134915.1	ABKIFW000000000	SAMN32880371	NJDA-WGS-150	Escherichia coli
GCA_028130715.1	ABKICC000000000	SAMN32880365	NJDA-WGS-144	Escherichia coli
GCA_028130695.1	ABKICA000000000	SAMN32880368	NJDA-WGS-147	Escherichia coli
GCA_028130675.1	ABKICB000000000	SAMN32880379	NJDA-WGS-160	Escherichia coli
GCA_028130395.1	ABKIBP000000000	SAMN32880362	NJDA-WGS-140	Escherichia coli
GCA_028130415.1	ABKIBO000000000	SAMN32880373	NJDA-WGS-152	Escherichia coli
GCA_028130315.1	ABKIBJ000000000	SAMN32880360	NJDA-WGS-130	Escherichia coli
GCA_028130055.1	ABKIAW000000000	SAMN32880364	NJDA-WGS-143	Escherichia coli
GCA_028130035.1	ABKIAU000000000	SAMN32880376	NJDA-WGS-156	Escherichia coli
GCA_028129175.1	ABKHZI000000000	SAMN32880374	NJDA-WGS-154	Escherichia coli
GCA_028129135.1	ABKHZF000000000	SAMN32880357	NJDA-WGS-127	Escherichia coli
GCA_028125805.1	ABKHXX000000000	SAMN32880377	NJDA-WGS-158	Escherichia coli
GCA_028127555.1	ABKHYO000000000	SAMN32880359	NJDA-WGS-129	Escherichia coli
GCA_028127535.1	ABKHYN000000000	SAMN32880375	NJDA-WGS-155	Escherichia coli
GCA_024100075.1	ABGVXK000000000	SAMN29440918	NJDA-WGS-105	Escherichia coli
GCA_024097935.1	ABGVUL000000000	SAMN29440915	NJDA-WGS-108	Escherichia coli
GCA_024097915.1	ABGVUK000000000	SAMN29440914	NJDA-WGS-109	Escherichia coli
GCA_024097895.1	ABGVUO000000000	SAMN29440916	NJDA-WGS-107	Escherichia coli
GCA_024097875.1	ABGVUJ000000000	SAMN29440913	NJDA-WGS-111	Escherichia coli
GCA_024099075.1	ABGVVK000000000	SAMN29440917	NJDA-WGS-106	Escherichia coli
GCA_024096855.1	ABGVTB000000000	SAMN29440912	NJDA-WGS-110	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	80
Data volume, Mbytes	29633

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Escherichia coli

GenomeTrakr Project: NJ Department of Agriculture, Animal Health Diagnostic Laboratory

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