U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA777227 ID: 777227

Ursus americanus (American black bear)

Ursus americanus Genomic Resources

See Genome Information for Ursus americanus
Black bears, which range in color from black to white, are widespread across North America and occur in a wide variety of ecosystems. As large omnivores, they play important ecological roles in the varied habitats they occupy.. These data have been produced as part of the CCGP. Sequencing was conducted with HiFi Pacific Biosciences long reads at UCDavis Genome Core, Dovetail's OmniC libraries, and Illumina sequencing at UCBerkeley QB3 Genomics Core. For more information, go to: ccgproject.org
AccessionPRJNA777227
TypeUmbrella project
OrganismUrsus americanus[Taxonomy ID: 9643]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus americanus
SubmissionRegistration date: 2-Nov-2021
California Conservation Genomics Project
Related Resources
Locus Tag PrefixLMB16
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)2
SRA Experiments11
Publications
PubMed1
PMC1
Other datasets
BioSample9
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases211
Data volume, Mbytes94998
Ursus americanus encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
Contigs
SRA or Trace
Total

1
1
1
3
BioProject
accession
Assembly
level
OrganismTitle
PRJNA851482 ContigsUrsus americanusUrsus americanus alternate pseudohaplotype genome sequencing (UCLA)
PRJNA851483 ScaffoldsUrsus americanusUrsus americanus principal pseudohaplotype genome sequencing (UCLA)
PRJNA870921 SRA or TraceUrsus americanusUrsus americanus Genome sequencing and assembly (University of California,...)
transcriptome1
BioProject
accession
OrganismTitle
PRJNA1011923Ursus americanusUrsus americanus Transcriptome or Gene expression (UCLA)

Supplemental Content

Related Resources

Recent activity

  • Ursus americanus
    Ursus americanus
    Ursus americanus Genomic Resources
    BioProject

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center