hot springs metagenome (ID 791658) - BioProject

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Accession: PRJNA791658 ID: 791658

hot springs metagenome

Yellowstone National Park Hot Spring Metagenome-Assembled-Genomes

Accession	PRJNA791658
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	hot springs metagenome[Taxonomy ID: 433727] unclassified sequences; metagenomes; ecological metagenomes; hot springs metagenome
Publications	Fernandes-Martins MC et al., "Relationships between fluid mixing, biodiversity, and chemosynthetic primary productivity in Yellowstone hot springs.", Environ Microbiol, 2023 May;25(5):1022-1040 Buessecker S et al., "An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.", Nat Commun, 2022 Jun 30;13(1):3773
Submission	Registration date: 24-May-2022 Montana State University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	158
SRA Experiments	34
Publications
PubMed	2
PMC	1
Other datasets
BioSample	192
Assembly	158

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

158
158

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_032249615.1	JAVVHH000000000	SAMN37115052	PSP.bin.3	Acetobacteraceae bacterium
GCA_032249015.1	JAVVGR000000000	SAMN37115003	RBS.bin.2	Acidianus sp.
GCA_032248955.1	JAVVGT000000000	SAMN37115005	RBS.bin.4	Acidianus sp.
GCA_028276165.1	JAPYWV000000000	SAMN32179668	RSWP17	Acidilobaceae archaeon
GCA_028276005.1	JAPWTO000000000	SAMN32179816	RSNS4	Acidilobus sp.
GCA_028275845.1	JAPWTU000000000	SAMN32179822	RSNS10	Acidilobus sp.
GCA_028275725.1	JAPWUA000000000	SAMN32179828	RSNS16	Acidilobus sp.
GCA_028277005.1	JAPYVH000000000	SAMN32179628	RSEP6	Acidilobus sp.
GCA_028276635.1	JAPYVX000000000	SAMN32179644	RSNP13	Acidilobus sp.
GCA_028275245.1	JAPWVA000000000	SAMN32179854	RSWS17	Actinomycetota bacterium
GCA_028275445.1	JAPWUQ000000000	SAMN32179844	RSWS7	Anaerolineae bacterium
GCA_028275425.1	JAPWUT000000000	SAMN32179847	RSWS10	Anaerolineae bacterium
GCA_028275325.1	JAPWUW000000000	SAMN32179850	RSWS13	Anaerolineae bacterium
GCA_028275515.1	JAPWUM000000000	SAMN32179840	RSWS3	Anaerolineae bacterium
GCA_028276265.1	JAPYWQ000000000	SAMN32179663	RSWP12	Anaerolineales bacterium
GCA_028275285.1	JAPWUX000000000	SAMN32179851	RSWS14	Anaerolineales bacterium
GCA_032249035.1	JAVVGO000000000	SAMN37115000	PSS.bin.8	Armatimonadota bacterium
GCA_032249415.1	JAVVFW000000000	SAMN37114982	PSS.bin.1	Armatimonadota bacterium
GCA_032249595.1	JAVVHJ000000000	SAMN37115054	PSP.bin.5	Armatimonadota bacterium
GCA_032249775.1	JAVVHD000000000	SAMN37115048	PSP.bin.14	Armatimonadota bacterium
GCA_028275265.1	JAPWUZ000000000	SAMN32179853	RSWS16	Armatimonadota bacterium
GCA_032249525.1	JAVVHK000000000	SAMN37115055	PSP.bin.6	Bacteroidota bacterium
GCA_028275505.1	JAPWUP000000000	SAMN32179843	RSWS6	Bryobacteraceae bacterium
GCA_032249515.1	JAVVHN000000000	SAMN37115058	RBP.bin.1	Caldivirga sp.
GCA_028275645.1	JAPWUH000000000	SAMN32179835	RSNS23	Caldivirga sp.
GCA_028275865.1	JAPWTV000000000	SAMN32179823	RSNS11	Caldivirga sp.
GCA_028276985.1	JAPYVF000000000	SAMN32179626	RSEP4	Caldivirga sp.
GCA_028276645.1	JAPYVZ000000000	SAMN32179646	RSNP15	Caldivirga sp.
GCA_028275565.1	JAPWUK000000000	SAMN32179838	RSWS1	Candidatus Acetothermia bacterium
GCA_028275205.1	JAPWVB000000000	SAMN32179855	RSWS18	Candidatus Acetothermia bacterium
GCA_028275195.1	JAPWVC000000000	SAMN32179856	RSWS19	Candidatus Acetothermia bacterium
GCA_032249395.1	JAVVFY000000000	SAMN37114984	PSS.bin.12	Candidatus Aenigmatarchaeota archaeon
GCA_028275385.1	JAPWUR000000000	SAMN32179845	RSWS8	Candidatus Bathyarchaeota archaeon
GCA_032249815.1	JAVVHC000000000	SAMN37115047	PSP.bin.13	Candidatus Caldarchaeales archaeon
GCA_032249095.1	JAVVGN000000000	SAMN37114999	PSS.bin.6	Candidatus Caldarchaeales archaeon
GCA_028275365.1	JAPWUU000000000	SAMN32179848	RSWS11	Candidatus Caldatribacterium sp.
GCA_032249375.1	JAVVFZ000000000	SAMN37114985	PSS.bin.14	Candidatus Caldipriscus sp.
GCA_032249335.1	JAVVGC000000000	SAMN37114988	PSS.bin.17	Candidatus Calditenuis sp.
GCA_032249575.1	JAVVHL000000000	SAMN37115056	PSP.bin.8	Candidatus Calditenuis sp.
GCA_032249135.1	JAVVGL000000000	SAMN37114997	PSS.bin.4	Candidatus Calescibacterium sp.
GCA_023539675.1	JAKCEL000000000	SAMN24311711	GC-01.bin.10	Candidatus Geocrenenecus arthurdayi
GCA_023539585.1	JAKCER000000000	SAMN24311717	GC-10.bin.45	Candidatus Geocrenenecus arthurdayi
GCA_023539595.1	JAKCEQ000000000	SAMN24311716	GC-07.bin.31	Candidatus Geocrenenecus arthurdayi
GCA_023539555.1	JAKCEO000000000	SAMN24311714	GC-06.bin.5	Candidatus Geocrenenecus arthurdayi
GCA_023539395.1	JAKCEX000000000	SAMN24311723	LGB-05.bin.6	Candidatus Geocrenenecus arthurdayi
GCA_023539475.1	JAKCEU000000000	SAMN24311720	GC-11.bin.8	Candidatus Geocrenenecus arthurdayi
GCA_032249175.1	JAVVGK000000000	SAMN37114996	PSS.bin.3	Candidatus Hydrothermia bacterium
GCA_028276425.1	JAPYWK000000000	SAMN32179657	RSWP6	Candidatus Hydrothermia bacterium
GCA_028276445.1	JAPYWI000000000	SAMN32179655	RSWP4	Candidatus Micrarchaeales archaeon
GCA_032249435.1	JAVVFX000000000	SAMN37114983	PSS.bin.10	Candidatus Nanopusillus sp.
GCA_028275885.1	JAPWTW000000000	SAMN32179824	RSNS12	Candidatus Nanopusillus sp.
GCA_028275775.1	JAPWTZ000000000	SAMN32179827	RSNS15	Candidatus Nanopusillus sp.
GCA_028276855.1	JAPYVN000000000	SAMN32179634	RSNP3	Candidatus Nanopusillus sp.
GCA_028276785.1	JAPYVP000000000	SAMN32179636	RSNP5	Candidatus Nanopusillus sp.
GCA_028276585.1	JAPYWA000000000	SAMN32179647	RSNP16	Candidatus Nanopusillus sp.
GCA_032249155.1	JAVVGJ000000000	SAMN37114995	PSS.bin.23	Candidatus Paceibacterota bacterium
GCA_028276075.1	JAPYXA000000000	SAMN32179673	RSWP22	Candidatus Paceibacterota bacterium
GCA_028276315.1	JAPYWP000000000	SAMN32179662	RSWP11	Candidatus Paceibacterota bacterium
GCA_023539445.1	JAKCEW000000000	SAMN24311722	LGB-05.bin.49	Candidatus Terraquivivens yellowstonensis
GCA_023539435.1	JAKCEZ000000000	SAMN24311725	S-04.bin.26	Candidatus Terraquivivens yellowstonensis
GCA_023539405.1	JAKCEY000000000	SAMN24311724	MH-01.bin.55	Candidatus Terraquivivens yellowstonensis
GCA_023539525.1	JAKCET000000000	SAMN24311719	GC-10.bin.53	Candidatus Terraquivivens yellowstonensis
GCA_023539565.1	JAKCEP000000000	SAMN24311715	GC-07.bin.10	Candidatus Terraquivivens yellowstonensis
GCA_023539655.1	JAKCEM000000000	SAMN24311712	GC-01.bin.60	Candidatus Terraquivivens yellowstonensis
GCA_023539635.1	JAKCEN000000000	SAMN24311713	GC-06.bin.32	Candidatus Terraquivivens yellowstonensis
GCA_028276305.1	JAPYWO000000000	SAMN32179661	RSWP10	Candidatus Thermokryptus sp.
GCA_023539495.1	JAKCEV000000000	SAMN24311721	LGB-01.bin.22	Candidatus Wolframiiraptor allenii
GCA_023539485.1	JAKCES000000000	SAMN24311718	GC-10.bin.51	Candidatus Wolframiiraptor allenii
GCA_032249655.1	JAVVHG000000000	SAMN37115051	PSP.bin.2	Chlorobiota bacterium
GCA_028275185.1	JAPWVD000000000	SAMN32179857	RSWS20	Chloroflexia bacterium
GCA_032249755.1	JAVVGZ000000000	SAMN37115044	PSP.bin.10	Cyanobacteriota bacterium PSP.bin.10
GCA_032249735.1	JAVVHA000000000	SAMN37115045	PSP.bin.11	Dehalococcoidia bacterium
GCA_028276365.1	JAPYWL000000000	SAMN32179658	RSWP7	Deltaproteobacteria bacterium
GCA_028276375.1	JAPYWN000000000	SAMN32179660	RSWP9	Desulfurispora sp.
GCA_028275705.1	JAPWUD000000000	SAMN32179831	RSNS19	Desulfurococcaceae archaeon
GCA_028275635.1	JAPWUI000000000	SAMN32179836	RSNS24	Desulfurococcaceae archaeon
GCA_032249295.1	JAVVGD000000000	SAMN37114989	PSS.bin.18	Desulfurococcales archaeon
GCA_032249275.1	JAVVGG000000000	SAMN37114992	PSS.bin.20	Desulfurococcales archaeon
GCA_032249255.1	JAVVGE000000000	SAMN37114990	PSS.bin.19	Desulfurococcales archaeon
GCA_028275585.1	JAPWUJ000000000	SAMN32179837	RSNS25	Desulfurococcales archaeon
GCA_028275745.1	JAPWUB000000000	SAMN32179829	RSNS17	Desulfurococcales archaeon
GCA_028276045.1	JAPWTL000000000	SAMN32179813	RSNS1	Desulfurococcales archaeon
GCA_028276795.1	JAPYVQ000000000	SAMN32179637	RSNP6	Desulfurococcales archaeon
GCA_028276525.1	JAPYWE000000000	SAMN32179651	RSNP20	Desulfurococcales archaeon
GCA_028276605.1	JAPYWC000000000	SAMN32179649	RSNP18	Desulfurococcales archaeon
GCA_028276205.1	JAPYWU000000000	SAMN32179667	RSWP16	Dictyoglomaceae bacterium
GCA_028276185.1	JAPYWW000000000	SAMN32179669	RSWP18	Fervidobacterium sp.
GCA_028276255.1	JAPYWR000000000	SAMN32179664	RSWP13	Fimbriimonadia bacterium
GCA_028275465.1	JAPWUO000000000	SAMN32179842	RSWS5	Hadesarchaea archaeon
GCA_028276625.1	JAPYVY000000000	SAMN32179645	RSNP14	Hydrogenobacter sp.
GCA_028276405.1	JAPYWJ000000000	SAMN32179656	RSWP5	Hydrogenobacter sp.
GCA_028275825.1	JAPWTX000000000	SAMN32179825	RSNS13	Ignisphaera sp.
GCA_032249635.1	JAVVHF000000000	SAMN37115050	PSP.bin.16	Meiothermus sp.
GCA_028276965.1	JAPYVI000000000	SAMN32179629	RSEP7	Metallosphaera sp.
GCA_028276105.1	JAPYWZ000000000	SAMN32179672	RSWP21	Microgenomates group bacterium
GCA_028275655.1	JAPWUF000000000	SAMN32179833	RSNS21	Nanoarchaeales archaeon
GCA_028275605.1	JAPWUG000000000	SAMN32179834	RSNS22	Nitrososphaeria archaeon
GCA_028276565.1	JAPYWB000000000	SAMN32179648	RSNP17	Nitrososphaeria archaeon
GCA_028276125.1	JAPYWY000000000	SAMN32179671	RSWP20	Pseudothermotoga sp.
GCA_032249215.1	JAVVGH000000000	SAMN37114993	PSS.bin.21	Pyrobaculum sp.
GCA_028276065.1	JAPWTN000000000	SAMN32179815	RSNS3	Pyrobaculum sp.
GCA_032248915.1	JAVVGX000000000	SAMN37115009	RBS.bin.9	Saccharolobus sp.
GCA_028276345.1	JAPYWM000000000	SAMN32179659	RSWP8	Sphingobacterium sp.
GCA_032249695.1	JAVVHE000000000	SAMN37115049	PSP.bin.15	Sphingomonadaceae bacterium
GCA_028276145.1	JAPYWX000000000	SAMN32179670	RSWP19	Spirochaetota bacterium
GCA_032248975.1	JAVVGU000000000	SAMN37115006	RBS.bin.5	Sulfolobaceae archaeon
GCA_032248935.1	JAVVGW000000000	SAMN37115008	RBS.bin.8	Sulfolobaceae archaeon
GCA_028276925.1	JAPYVK000000000	SAMN32179631	RSEP10	Sulfolobaceae archaeon
GCA_028277095.1	JAPYVD000000000	SAMN32179624	RSEP2	Sulfolobaceae archaeon
GCA_028277025.1	JAPYVG000000000	SAMN32179627	RSEP5	Sulfolobaceae archaeon
GCA_032248895.1	JAVVGV000000000	SAMN37115007	RBS.bin.7	Sulfolobales archaeon
GCA_032249455.1	JAVVHQ000000000	SAMN37115061	RBP.bin.4	Sulfolobales archaeon
GCA_028276895.1	JAPYVL000000000	SAMN32179632	RSNP1	Sulfolobales archaeon
GCA_028277065.1	JAPYVC000000000	SAMN32179623	RSEP1	Sulfolobales archaeon
GCA_028275945.1	JAPWTR000000000	SAMN32179819	RSNS7	Sulfolobales archaeon
GCA_028276465.1	JAPYWF000000000	SAMN32179652	RSWP1	Sulfurihydrogenibium sp.
GCA_028276765.1	JAPYVU000000000	SAMN32179641	RSNP10	Sulfurihydrogenibium sp.
GCA_032249715.1	JAVVHB000000000	SAMN37115046	PSP.bin.12	Tepidimonas sp.
GCA_032249555.1	JAVVHM000000000	SAMN37115057	PSP.bin.9	Thermocrinis sp.
GCA_032249195.1	JAVVGI000000000	SAMN37114994	PSS.bin.22	Thermocrinis sp.
GCA_028276475.1	JAPYWH000000000	SAMN32179654	RSWP3	Thermocrinis sp.
GCA_028276885.1	JAPYVM000000000	SAMN32179633	RSNP2	Thermocrinis sp.
GCA_028275965.1	JAPWTQ000000000	SAMN32179818	RSNS6	Thermocrinis sp.
GCA_028275295.1	JAPWUY000000000	SAMN32179852	RSWS15	Thermodesulfobacteriota bacterium
GCA_028275925.1	JAPWTS000000000	SAMN32179820	RSNS8	Thermofilales archaeon
GCA_028275765.1	JAPWUC000000000	SAMN32179830	RSNS18	Thermofilales archaeon
GCA_028275485.1	JAPWUN000000000	SAMN32179841	RSWS4	Thermofilales archaeon
GCA_028276535.1	JAPYWD000000000	SAMN32179650	RSNP19	Thermofilales archaeon
GCA_028276685.1	JAPYVW000000000	SAMN32179643	RSNP12	Thermofilales archaeon
GCA_028276695.1	JAPYVV000000000	SAMN32179642	RSNP11	Thermofilum sp.
GCA_028275805.1	JAPWTY000000000	SAMN32179826	RSNS14	Thermofilum sp.
GCA_028276245.1	JAPYWS000000000	SAMN32179665	RSWP14	Thermoflexales bacterium
GCA_032249355.1	JAVVGA000000000	SAMN37114986	PSS.bin.15	Thermoflexus sp.
GCA_032249675.1	JAVVHI000000000	SAMN37115053	PSP.bin.4	Thermoflexus sp.
GCA_028276215.1	JAPYWT000000000	SAMN32179666	RSWP15	Thermoflexus sp.
GCA_028275375.1	JAPWUS000000000	SAMN32179846	RSWS9	Thermoflexus sp.
GCA_028275985.1	JAPWTP000000000	SAMN32179817	RSNS5	Thermogladius sp.
GCA_028276725.1	JAPYVT000000000	SAMN32179640	RSNP9	Thermogladius sp.
GCA_032249315.1	JAVVGB000000000	SAMN37114987	PSS.bin.16	Thermoproteota archaeon
GCA_032249235.1	JAVVGF000000000	SAMN37114991	PSS.bin.2	Thermoproteota archaeon
GCA_032249055.1	JAVVGP000000000	SAMN37115001	PSS.bin.9	Thermoproteota archaeon
GCA_032249075.1	JAVVGQ000000000	SAMN37115002	RBS.bin.1	Thermoproteus sp.
GCA_032249475.1	JAVVHP000000000	SAMN37115060	RBP.bin.3	Thermoproteus sp.
GCA_028276945.1	JAPYVJ000000000	SAMN32179630	RSEP8	Thermoproteus sp.
GCA_028276825.1	JAPYVR000000000	SAMN32179638	RSNP7	Thermoproteus sp.
GCA_028275905.1	JAPWTT000000000	SAMN32179821	RSNS9	Thermoproteus sp.
GCA_032249115.1	JAVVGM000000000	SAMN37114998	PSS.bin.5	Thermus sp.
GCA_032249795.1	JAVVGY000000000	SAMN37115043	PSP.bin.1	Thermus sp.
GCA_028275545.1	JAPWUL000000000	SAMN32179839	RSWS2	Thermus sp.
GCA_028276485.1	JAPYWG000000000	SAMN32179653	RSWP2	Thermus sp.
GCA_032248995.1	JAVVGS000000000	SAMN37115004	RBS.bin.3	Vulcanisaeta sp.
GCA_032249495.1	JAVVHO000000000	SAMN37115059	RBP.bin.2	Vulcanisaeta sp.
GCA_028276745.1	JAPYVS000000000	SAMN32179639	RSNP8	Vulcanisaeta sp.
GCA_028276845.1	JAPYVO000000000	SAMN32179635	RSNP4	Vulcanisaeta sp.
GCA_028277045.1	JAPYVE000000000	SAMN32179625	RSEP3	Vulcanisaeta sp.
GCA_028275625.1	JAPWUE000000000	SAMN32179832	RSNS20	Vulcanisaeta sp.
GCA_028276025.1	JAPWTM000000000	SAMN32179814	RSNS2	Vulcanisaeta sp.
GCA_028275345.1	JAPWUV000000000	SAMN32179849	RSWS12	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	779
Data volume, Tbytes	0.24

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hot springs metagenome

Yellowstone National Park Hot Spring Metagenome-Assembled-Genomes

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