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Accession: PRJEB54748 ID: 859360

EMG produced TPA metagenomics assembly of PRJNA641579 data set (Multi-omics profiling of rumen microbiome reveals the degradation of plant fiber in Hu sheep).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA641579, and was assembled with metaSPAdes v3. More...
AccessionPRJEB54748
Data TypeGenome sequencing and assembly
ScopeMonoisolate
KeywordTPA:assembly
PublicationsMitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
SubmissionRegistration date: 16-Jul-2022
EMG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4095
WGS master728
Publications
PubMed1
PMC1
Other datasets
BioSample728
Assembly728
Assembly details:
Assembly levelNumber of Assemblies
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AssemblyLevelWGSBioSampleTaxonomy
GCA_946415455.1ContigCAMKSO000000000SAMEA110643190
GCA_946405795.1ContigCAMJII000000000SAMEA110643297
GCA_946409485.1ContigCAMJWP000000000SAMEA110643447
GCA_946405415.1ContigCAMJHC000000000SAMEA110643490
GCA_946404305.1ContigCAMJDD000000000SAMEA110643635
GCA_946409125.1ContigCAMJUX000000000SAMEA110643576
GCA_946403125.1ContigCAMIYW000000000SAMEA110643320
GCA_946407135.1ContigCAMJMW000000000SAMEA110643230
GCA_946410685.1ContigCAMKBG000000000SAMEA110643342
GCA_946413345.1ContigCAMKKG000000000SAMEA110643160
GCA_946406845.1ContigCAMJLY000000000SAMEA110643495
GCA_946403175.1ContigCAMIZA000000000SAMEA110643411
GCA_946409265.1ContigCAMJVS000000000SAMEA110643586
GCA_946413425.1ContigCAMKKM000000000SAMEA110643544
GCA_946409025.1ContigCAMJUT000000000SAMEA110643130
GCA_946413705.1ContigCAMKLR000000000SAMEA110643110
GCA_946404395.1ContigCAMJDN000000000SAMEA110643631
GCA_946405105.1ContigCAMJFY000000000SAMEA110643795
GCA_946409785.1ContigCAMJXU000000000SAMEA110643410
GCA_946408435.1ContigCAMJSG000000000SAMEA110643719
GCA_946409515.1ContigCAMJWS000000000SAMEA110643449
GCA_946401755.1ContigCAMIVH000000000SAMEA110643768
GCA_946412015.1ContigCAMKGA000000000SAMEA110643225
GCA_946404585.1ContigCAMJEC000000000SAMEA110643595
GCA_946414615.1ContigCAMKPG000000000SAMEA110643129
GCA_946408655.1ContigCAMJTE000000000SAMEA110643488
GCA_946403545.1ContigCAMJAG000000000SAMEA110643479
GCA_946410555.1ContigCAMKAT000000000SAMEA110643396
GCA_946410905.1ContigCAMKCB000000000SAMEA110643421
GCA_946402785.1ContigCAMIXP000000000SAMEA110643716
GCA_946405995.1ContigCAMJIY000000000SAMEA110643476
GCA_946414915.1ContigCAMKQK000000000SAMEA110643697
GCA_946404175.1ContigCAMJCR000000000SAMEA110643725
GCA_946407635.1ContigCAMJOZ000000000SAMEA110643562
GCA_946414655.1ContigCAMKPL000000000SAMEA110643177
GCA_946410525.1ContigCAMKAQ000000000SAMEA110643814
GCA_946405285.1ContigCAMJGO000000000SAMEA110643122
GCA_946407815.1ContigCAMJPB000000000SAMEA110643466
GCA_946411895.1ContigCAMKFP000000000SAMEA110643403
GCA_946408185.1ContigCAMJRC000000000SAMEA110643355
GCA_946414975.1ContigCAMKQS000000000SAMEA110643482
GCA_946408345.1ContigCAMJRR000000000SAMEA110643481
GCA_946411965.1ContigCAMKFW000000000SAMEA110643301
GCA_946401725.1ContigCAMIVE000000000SAMEA110643736
GCA_946403065.1ContigCAMIYQ000000000SAMEA110643445
GCA_946405885.1ContigCAMJIQ000000000SAMEA110643491
GCA_946410965.1ContigCAMKCH000000000SAMEA110643480
GCA_946403285.1ContigCAMIZM000000000SAMEA110643499
GCA_946409315.1ContigCAMJVZ000000000SAMEA110643778
GCA_946413275.1ContigCAMKJW000000000SAMEA110643168
GCA_946414565.1ContigCAMKPA000000000SAMEA110643689
GCA_946406205.1ContigCAMJJW000000000SAMEA110643514
GCA_946411045.1ContigCAMKCP000000000SAMEA110643119
GCA_946404345.1ContigCAMJDP000000000SAMEA110643765
GCA_946410815.1ContigCAMKBU000000000SAMEA110643134
GCA_946405435.1ContigCAMJHF000000000SAMEA110643229
GCA_946407685.1ContigCAMJPF000000000SAMEA110643564
GCA_946410235.1ContigCAMJZO000000000SAMEA110643602
GCA_946413585.1ContigCAMKLG000000000SAMEA110643366
GCA_946412455.1ContigCAMKHI000000000SAMEA110643652
GCA_946408515.1ContigCAMJSR000000000SAMEA110643748
GCA_946402945.1ContigCAMIYB000000000SAMEA110643287
GCA_946408005.1ContigCAMJQK000000000SAMEA110643353
GCA_946413185.1ContigCAMKJM000000000SAMEA110643555
GCA_946411225.1ContigCAMKDI000000000SAMEA110643687
GCA_946408755.1ContigCAMJTN000000000SAMEA110643392
GCA_946403045.1ContigCAMIYP000000000SAMEA110643450
GCA_946406835.1ContigCAMJLU000000000SAMEA110643661
GCA_946414355.1ContigCAMKOC000000000SAMEA110643786
GCA_946406015.1ContigCAMJJD000000000SAMEA110643162
GCA_946408295.1ContigCAMJRT000000000SAMEA110643448
GCA_946403185.1ContigCAMIZE000000000SAMEA110643335
GCA_946402975.1ContigCAMIYI000000000SAMEA110643712
GCA_946410805.1ContigCAMKBQ000000000SAMEA110643760
GCA_946415345.1ContigCAMKRY000000000SAMEA110643693
GCA_946405495.1ContigCAMJHK000000000SAMEA110643203
GCA_946409465.1ContigCAMJWO000000000SAMEA110643548
GCA_946403015.1ContigCAMIYO000000000SAMEA110643776
GCA_946412245.1ContigCAMKGM000000000SAMEA110643126
GCA_946405775.1ContigCAMJIJ000000000SAMEA110643107
GCA_946403165.1ContigCAMIYY000000000SAMEA110643485
GCA_946407975.1ContigCAMJQC000000000SAMEA110643674
GCA_946407045.1ContigCAMJMO000000000SAMEA110643369
GCA_946406805.1ContigCAMJLT000000000SAMEA110643673
GCA_946404425.1ContigCAMJDM000000000SAMEA110643345
GCA_946407835.1ContigCAMJPI000000000SAMEA110643277
GCA_946409355.1ContigCAMJWC000000000SAMEA110643364
GCA_946405445.1ContigCAMJHG000000000SAMEA110643592
GCA_946406745.1ContigCAMJLL000000000SAMEA110643742
GCA_946403455.1ContigCAMIZY000000000SAMEA110643266
GCA_946402545.1ContigCAMIWU000000000SAMEA110643109
GCA_946404495.1ContigCAMJDT000000000SAMEA110643540
GCA_946415475.1ContigCAMKSQ000000000SAMEA110643324
GCA_946405235.1ContigCAMJGQ000000000SAMEA110643453
GCA_946410425.1ContigCAMKAH000000000SAMEA110643737
GCA_946404205.1ContigCAMJCU000000000SAMEA110643512
GCA_946402895.1ContigCAMIXZ000000000SAMEA110643711
GCA_946403855.1ContigCAMJBH000000000SAMEA110643300
GCA_946403315.1ContigCAMIZK000000000SAMEA110643773
GCA_946405575.1ContigCAMJHP000000000SAMEA110643469
GCA_946406945.1ContigCAMJMH000000000SAMEA110643223
GCA_946406995.1ContigCAMJMI000000000SAMEA110643596
GCA_946404045.1ContigCAMJCE000000000SAMEA110643405
GCA_946411795.1ContigCAMKFH000000000SAMEA110643761
GCA_946407625.1ContigCAMJOX000000000SAMEA110643560
GCA_946411355.1ContigCAMKDT000000000SAMEA110643641
GCA_946403005.1ContigCAMIYL000000000SAMEA110643159
GCA_946414935.1ContigCAMKQN000000000SAMEA110643675
GCA_946412275.1ContigCAMKGP000000000SAMEA110643767
GCA_946403365.1ContigCAMIZR000000000SAMEA110643444
GCA_946404895.1ContigCAMJFI000000000SAMEA110643744
GCA_946407715.1ContigCAMJPH000000000SAMEA110643777
GCA_946404535.1ContigCAMJEA000000000SAMEA110643790
GCA_946408605.1ContigCAMJSZ000000000SAMEA110643696
GCA_946404055.1ContigCAMJCF000000000SAMEA110643552
GCA_946406775.1ContigCAMJLS000000000SAMEA110643305
GCA_946415715.1ContigCAMKTO000000000SAMEA110643188
GCA_946411535.1ContigCAMKEJ000000000SAMEA110643433
GCA_946410535.1ContigCAMKAR000000000SAMEA110643783
GCA_946401745.1ContigCAMIVG000000000SAMEA110643429
GCA_946414145.1ContigCAMKNG000000000SAMEA110643430
GCA_946403215.1ContigCAMIZG000000000SAMEA110643690
GCA_946407775.1ContigCAMJPA000000000SAMEA110643797
GCA_946404775.1ContigCAMJEU000000000SAMEA110643504
GCA_946407695.1ContigCAMJPE000000000SAMEA110643124
GCA_946408555.1ContigCAMJSW000000000SAMEA110643821
GCA_946411175.1ContigCAMKDD000000000SAMEA110643387
GCA_946405275.1ContigCAMJGK000000000SAMEA110643688
GCA_946407435.1ContigCAMJNW000000000SAMEA110643283
GCA_946408135.1ContigCAMJQV000000000SAMEA110643701
GCA_946410325.1ContigCAMJZX000000000SAMEA110643274
GCA_946413535.1ContigCAMKKY000000000SAMEA110643614
GCA_946407115.1ContigCAMJMU000000000SAMEA110643327
GCA_946411615.1ContigCAMKER000000000SAMEA110643270
GCA_946409455.1ContigCAMJWN000000000SAMEA110643361
GCA_946414375.1ContigCAMKOG000000000SAMEA110643193
GCA_946408195.1ContigCAMJRD000000000SAMEA110643150
GCA_946404265.1ContigCAMJCZ000000000SAMEA110643237
GCA_946415605.1ContigCAMKTF000000000SAMEA110643787
GCA_946402445.1ContigCAMIWN000000000SAMEA110643685
GCA_946411165.1ContigCAMKDC000000000SAMEA110643127
GCA_946415725.1ContigCAMKTP000000000SAMEA110643252
GCA_946410825.1ContigCAMKBS000000000SAMEA110643658
GCA_946413375.1ContigCAMKKI000000000SAMEA110643228
GCA_946405855.1ContigCAMJIS000000000SAMEA110643757
GCA_946409725.1ContigCAMJXN000000000SAMEA110643750
GCA_946404935.1ContigCAMJFL000000000SAMEA110643175
GCA_946407475.1ContigCAMJOC000000000SAMEA110643579
GCA_946403635.1ContigCAMJAQ000000000SAMEA110643705
GCA_946410065.1ContigCAMJYX000000000SAMEA110643676
GCA_946414895.1ContigCAMKQJ000000000SAMEA110643317
GCA_946412035.1ContigCAMKGC000000000SAMEA110643431
GCA_946411675.1ContigCAMKEV000000000SAMEA110643698
GCA_946408225.1ContigCAMJRE000000000SAMEA110643382
GCA_946411595.1ContigCAMKEP000000000SAMEA110643601
GCA_946406275.1ContigCAMJJZ000000000SAMEA110643745
GCA_946411435.1ContigCAMKDZ000000000SAMEA110643246
GCA_946410015.1ContigCAMJYT000000000SAMEA110643721
GCA_946406095.1ContigCAMJJO000000000SAMEA110643171
GCA_946414805.1ContigCAMKPZ000000000SAMEA110643648
GCA_946409095.1ContigCAMJUO000000000SAMEA110643111
GCA_946407505.1ContigCAMJOF000000000SAMEA110643774
GCA_946411005.1ContigCAMKCK000000000SAMEA110643412
GCA_946409245.1ContigCAMJVQ000000000SAMEA110643511
GCA_946414965.1ContigCAMKQQ000000000SAMEA110643691
GCA_946413505.1ContigCAMKKW000000000SAMEA110643804
GCA_946405485.1ContigCAMJHJ000000000SAMEA110643497
GCA_946405045.1ContigCAMJFV000000000SAMEA110643530
GCA_946403205.1ContigCAMIZB000000000SAMEA110643334
GCA_946415615.1ContigCAMKTG000000000SAMEA110643507
GCA_946402435.1ContigCAMIWM000000000SAMEA110643458
GCA_946410455.1ContigCAMKAJ000000000SAMEA110643782
GCA_946405685.1ContigCAMJHY000000000SAMEA110643605
GCA_946402965.1ContigCAMIYG000000000SAMEA110643645
GCA_946410635.1ContigCAMKBA000000000SAMEA110643724
GCA_946405035.1ContigCAMJFU000000000SAMEA110643347
GCA_946405635.1ContigCAMJHO000000000SAMEA110643621
GCA_946410215.1ContigCAMJZN000000000SAMEA110643723
GCA_946401625.1ContigCAMIVB000000000SAMEA110643145
GCA_946409645.1ContigCAMJXE000000000SAMEA110643634
GCA_946409325.1ContigCAMJWA000000000SAMEA110643310
GCA_946403585.1ContigCAMJAK000000000SAMEA110643565
GCA_946406025.1ContigCAMJJF000000000SAMEA110643825
GCA_946406085.1ContigCAMJJH000000000SAMEA110643647
GCA_946407035.1ContigCAMJMN000000000SAMEA110643407
GCA_946413805.1ContigCAMKMC000000000SAMEA110643140
GCA_946409405.1ContigCAMJWL000000000SAMEA110643819
GCA_946404005.1ContigCAMJCB000000000SAMEA110643662
GCA_946405645.1ContigCAMJHW000000000SAMEA110643732
GCA_946409845.1ContigCAMJXY000000000SAMEA110643714
GCA_946411285.1ContigCAMKDN000000000SAMEA110643463
GCA_946403805.1ContigCAMJBJ000000000SAMEA110643265
GCA_946408475.1ContigCAMJSL000000000SAMEA110643625
GCA_946405665.1ContigCAMJHZ000000000SAMEA110643659
GCA_946414015.1ContigCAMKMW000000000SAMEA110643338
GCA_946410855.1ContigCAMKBW000000000SAMEA110643573
GCA_946411385.1ContigCAMKDV000000000SAMEA110643802
GCA_946415595.1ContigCAMKTC000000000SAMEA110643116
GCA_946402655.1ContigCAMIXD000000000SAMEA110643801
GCA_946414985.1ContigCAMKQT000000000SAMEA110643537
GCA_946409075.1ContigCAMJUP000000000SAMEA110643219
GCA_946413325.1ContigCAMKJY000000000SAMEA110643239
GCA_946413835.1ContigCAMKMF000000000SAMEA110643809
GCA_946413575.1ContigCAMKLF000000000SAMEA110643400
GCA_946401805.1ContigCAMIVL000000000SAMEA110643201
GCA_946413615.1ContigCAMKLH000000000SAMEA110643707
GCA_946407365.1ContigCAMJNR000000000SAMEA110643211
GCA_946413015.1ContigCAMKJJ000000000SAMEA110643708
GCA_946403895.1ContigCAMJBQ000000000SAMEA110643810
GCA_946415795.1ContigCAMKTW000000000SAMEA110643679
GCA_946409705.1ContigCAMJXJ000000000SAMEA110643306
GCA_946414675.1ContigCAMKPM000000000SAMEA110643393
GCA_946405825.1ContigCAMJIN000000000SAMEA110643391
GCA_946410135.1ContigCAMJZE000000000SAMEA110643285
GCA_946406355.1ContigCAMJKI000000000SAMEA110643769
GCA_946405965.1ContigCAMJIZ000000000SAMEA110643510
GCA_946414155.1ContigCAMKNJ000000000SAMEA110643815
GCA_946406195.1ContigCAMJJT000000000SAMEA110643717
GCA_946415355.1ContigCAMKSC000000000SAMEA110643531
GCA_946404145.1ContigCAMJCN000000000SAMEA110643409
GCA_946404505.1ContigCAMJDX000000000SAMEA110643441
GCA_946408675.1ContigCAMJTH000000000SAMEA110643244
GCA_946404125.1ContigCAMJCK000000000SAMEA110643528
GCA_946402455.1ContigCAMIWQ000000000SAMEA110643420
GCA_946414435.1ContigCAMKOM000000000SAMEA110643440
GCA_946415275.1ContigCAMKRW000000000SAMEA110643816
GCA_946404845.1ContigCAMJFD000000000SAMEA110643684
GCA_946411935.1ContigCAMKFS000000000SAMEA110643299
GCA_946408075.1ContigCAMJQQ000000000SAMEA110643350
GCA_946415265.1ContigCAMKRV000000000SAMEA110643622
GCA_946414725.1ContigCAMKPT000000000SAMEA110643739
GCA_946409745.1ContigCAMJXP000000000SAMEA110643726
GCA_946411665.1ContigCAMKEU000000000SAMEA110643461
GCA_946414195.1ContigCAMKNM000000000SAMEA110643303
GCA_946414345.1ContigCAMKOB000000000SAMEA110643695
GCA_946408425.1ContigCAMJSE000000000SAMEA110643541
GCA_946404095.1ContigCAMJCJ000000000SAMEA110643800
GCA_946407955.1ContigCAMJPX000000000SAMEA110643267
GCA_946404685.1ContigCAMJEK000000000SAMEA110643185
GCA_946406315.1ContigCAMJKD000000000SAMEA110643638
GCA_946407655.1ContigCAMJOT000000000SAMEA110643286
GCA_946405975.1ContigCAMJIX000000000SAMEA110643753
GCA_946404545.1ContigCAMJDZ000000000SAMEA110643484
GCA_946406645.1ContigCAMJLD000000000SAMEA110643706
GCA_946407295.1ContigCAMJNL000000000SAMEA110643365
GCA_946408595.1ContigCAMJSX000000000SAMEA110643380
GCA_946406665.1ContigCAMJLE000000000SAMEA110643435
GCA_946405055.1ContigCAMJFW000000000SAMEA110643278
GCA_946414465.1ContigCAMKOP000000000SAMEA110643798
GCA_946409605.1ContigCAMJXA000000000SAMEA110643582
GCA_946414795.1ContigCAMKQA000000000SAMEA110643179
GCA_946401865.1ContigCAMIVO000000000SAMEA110643680
GCA_946409295.1ContigCAMJVW000000000SAMEA110643546
GCA_946411325.1ContigCAMKDQ000000000SAMEA110643340
GCA_946407745.1ContigCAMJPQ000000000SAMEA110643135
GCA_946406565.1ContigCAMJLA000000000SAMEA110643257
GCA_946409915.1ContigCAMJYC000000000SAMEA110643457
GCA_946401715.1ContigCAMIVF000000000SAMEA110643121
GCA_946406405.1ContigCAMJKN000000000SAMEA110643594
GCA_946406675.1ContigCAMJLJ000000000SAMEA110643434
GCA_946402375.1ContigCAMIWH000000000SAMEA110643686
GCA_946409885.1ContigCAMJYF000000000SAMEA110643147
GCA_946412205.1ContigCAMKGI000000000SAMEA110643553
GCA_946408015.1ContigCAMJQL000000000SAMEA110643354
GCA_946407065.1ContigCAMJMQ000000000SAMEA110643612
GCA_946406815.1ContigCAMJLV000000000SAMEA110643370
GCA_946411945.1ContigCAMKFT000000000SAMEA110643363
GCA_946405425.1ContigCAMJHE000000000SAMEA110643296
GCA_946413755.1ContigCAMKLU000000000SAMEA110643615
GCA_946407165.1ContigCAMJMZ000000000SAMEA110643132
GCA_946407425.1ContigCAMJNY000000000SAMEA110643284
GCA_946403725.1ContigCAMJAX000000000SAMEA110643518
GCA_946405565.1ContigCAMJHU000000000SAMEA110643718
GCA_946409855.1ContigCAMJXZ000000000SAMEA110643170
GCA_946404875.1ContigCAMJFF000000000SAMEA110643607
GCA_946403825.1ContigCAMJBI000000000SAMEA110643734
GCA_946411475.1ContigCAMKED000000000SAMEA110643720
GCA_946411685.1ContigCAMKEW000000000SAMEA110643115
GCA_946408145.1ContigCAMJQX000000000SAMEA110643752
GCA_946407705.1ContigCAMJPC000000000SAMEA110643464
GCA_946408565.1ContigCAMJSV000000000SAMEA110643671
GCA_946409505.1ContigCAMJWR000000000SAMEA110643165
GCA_946410665.1ContigCAMKBC000000000SAMEA110643181
GCA_946411635.1ContigCAMKES000000000SAMEA110643747
GCA_946401775.1ContigCAMIVI000000000SAMEA110643627
GCA_946414325.1ContigCAMKNY000000000SAMEA110643209
GCA_946410255.1ContigCAMJZR000000000SAMEA110643167
GCA_946409945.1ContigCAMJYI000000000SAMEA110643640
GCA_946410745.1ContigCAMKBL000000000SAMEA110643249
GCA_946403155.1ContigCAMIYX000000000SAMEA110643791
GCA_946405675.1ContigCAMJIC000000000SAMEA110643580
GCA_946402525.1ContigCAMIWT000000000SAMEA110643360
GCA_946414505.1ContigCAMKOU000000000SAMEA110643352
GCA_946406145.1ContigCAMJJL000000000SAMEA110643516
GCA_946405325.1ContigCAMJGU000000000SAMEA110643667
GCA_946403295.1ContigCAMIZL000000000SAMEA110643772
GCA_946402075.1ContigCAMIVU000000000SAMEA110643231
GCA_946402595.1ContigCAMIWY000000000SAMEA110643644
GCA_946412045.1ContigCAMKGD000000000SAMEA110643616
GCA_946408995.1ContigCAMJUL000000000SAMEA110643247
GCA_946415115.1ContigCAMKRD000000000SAMEA110643650
GCA_946405655.1ContigCAMJHX000000000SAMEA110643318
GCA_946407735.1ContigCAMJPL000000000SAMEA110643623
GCA_946411525.1ContigCAMKEI000000000SAMEA110643398
GCA_946414605.1ContigCAMKPH000000000SAMEA110643535
GCA_946413865.1ContigCAMKMI000000000SAMEA110643471
GCA_946414285.1ContigCAMKNW000000000SAMEA110643779
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