ooOscLobu (ID 876540) - BioProject

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Accession: PRJEB55739 ID: 876540

ooOscLobu

Oscarella lobularis

See Genome Information for Oscarella lobularis

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This project is a component of the Aquatic Symbiosis Genomics Project: Data and Assemblies

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254 additional projects are components of the Aquatic Symbiosis Genomics Project: Data and Assemblies.

This project collects the sequencing data and assemblies generated for Oscarella lobularis to facilitate genome assembly and annotation as part of the Aquatic Symbiosis Genomics (ASG) Project (https://www.aquaticsymbiosisgenomics.org/) from samples supplied by the ASG Sponges-as-Symbiont Hub (https://www.aquaticsymbiosisgenomics.org/collaborators/the-genomic-basis-of-sponge-microbe-symbioses/). The data under this project are made available subject to the Tree of Life Open Data Release Policy (https://www.darwintreeoflife.org/project-resources/).

Accession	PRJEB55739
Type	Umbrella project
Organism	Oscarella lobularis[Taxonomy ID: 121494] Eukaryota; Metazoa; Porifera; Homoscleromorpha; Homosclerophorida; Oscarellidae; Oscarella; Oscarella lobularis
Submission	Registration date: 3-Sep-2022 WELLCOME SANGER INSTITUTE

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	25199
WGS master	13
Genomic DNA	29
Transcript	25116
SRA Experiments	5
Protein Sequences	20875
Other datasets
BioSample	21
Assembly	19

SRA Data Details

Parameter	Value
Data volume, Gbases	157
Data volume, Mbytes	59056

ooOscLobu encompasses the following 31 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Complete genome
Chromosomes
Scaffolds
Total

1
2
1
4

BioProject accession	Assembly level	Organism	Title
PRJEB57963	Chromosomes	Oscarella lobularis	Oscarella lobularis genome assembly, ooOscLobu1 (WELLCOME SANGER INSTITUTE)
PRJEB57964	Scaffolds	Oscarella lobularis	Oscarella lobularis genome assembly, ooOscLobu1, alternate haplotype (WELLCOME SANGER INSTITUTE)
PRJNA1126205	Chromosomes	Oscarella lobularis	Oscarella lobularis RefSeq BioProject (NCBI)
PRJEB63041	Complete genome	sponge metagenome	sponge metagenome genome assembly, ooOscLobu1.metagenome (WELLCOME SANGER INSTITUTE)

Other

BioProject accession	Organism	Title
PRJEB55738	Oscarella lobularis	Oscarella lobularis, genomic and transcriptomic data (WELLCOME SANGER INSTITUTE)
PRJEB62991	uncultured Alphaproteobacteria bacterium	uncultured Alphaproteobacteria bacterium genome assembly, ooOscLobu1.Alphaproteobacteria_3 (WELLCOME SANGER INSTITUTE)
PRJEB63023	uncultured Alphaproteobacteria bacterium	uncultured Alphaproteobacteria bacterium genome assembly, ooOscLobu1.Alphaproteobacteria_2 (WELLCOME SANGER INSTITUTE)
PRJEB62955	uncultured Alphaproteobacteria bacterium	uncultured Alphaproteobacteria bacterium genome assembly, ooOscLobu1.Alphaproteobacteria_1 (WELLCOME SANGER INSTITUTE)
PRJEB62977	uncultured Alphaproteobacteria bacterium	uncultured Alphaproteobacteria bacterium genome assembly, ooOscLobu1.Alphaproteobacteria_5 (WELLCOME SANGER INSTITUTE)

List all 27 'Other' projects...

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ooOscLobu

Oscarella lobularis

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