ID 888326 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJEB56538 ID: 888326

EMG produced TPA metagenomics assembly of PRJNA635543 data set (Microbial Community of Sheep Rumen).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA635543, and was assembled with metaSPAdes v3. More...

Accession	PRJEB56538
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 8-Oct-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	500
WGS master	71
Publications
PubMed	1
PMC	1
Other datasets
BioSample	71
Assembly	71

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

71
71

Assembly	WGS	BioSample	Taxonomy
GCA_947164055.1	CAMUVP000000000	SAMEA111498667	Lachnospira pectinoschiza
GCA_947164775.1	CAMUXW000000000	SAMEA111498646	Segatella bryantii
GCA_947164755.1	CAMUXR000000000	SAMEA111498672	Succinatimonas hippei
GCA_947164565.1	CAMUXA000000000	SAMEA111498621	uncultured Bacillales bacterium
GCA_947164595.1	CAMUWZ000000000	SAMEA111498633	uncultured Bacillales bacterium
GCA_947164155.1	CAMUVS000000000	SAMEA111498653	uncultured Bacillales bacterium
GCA_947164395.1	CAMUWR000000000	SAMEA111498669	uncultured Bacteroidales bacterium
GCA_947163855.1	CAMUUZ000000000	SAMEA111498608	uncultured Bacteroidales bacterium
GCA_947164355.1	CAMUWL000000000	SAMEA111498639	uncultured Bacteroidales bacterium
GCA_947164225.1	CAMUVZ000000000	SAMEA111498630	uncultured Bacteroidales bacterium
GCA_947164325.1	CAMUWJ000000000	SAMEA111498673	uncultured Bacteroidales bacterium
GCA_947164025.1	CAMUVM000000000	SAMEA111498657	uncultured Bacteroidales bacterium
GCA_947164075.1	CAMUVL000000000	SAMEA111498631	uncultured Bacteroidales bacterium
GCA_947164675.1	CAMUXG000000000	SAMEA111498612	uncultured Bacteroidales bacterium
GCA_947164105.1	CAMUVQ000000000	SAMEA111498648	uncultured Bacteroidales bacterium
GCA_947164305.1	CAMUWE000000000	SAMEA111498674	uncultured Bacteroidales bacterium
GCA_947164375.1	CAMUWO000000000	SAMEA111498663	uncultured Bacteroidales bacterium
GCA_947164335.1	CAMUWG000000000	SAMEA111498632	uncultured Clostridia bacterium
GCA_947164745.1	CAMUXQ000000000	SAMEA111498607	uncultured Clostridia bacterium
GCA_947164265.1	CAMUWQ000000000	SAMEA111498660	uncultured Clostridia bacterium
GCA_947164315.1	CAMUWK000000000	SAMEA111498638	uncultured Erysipelotrichaceae bacterium
GCA_947163935.1	CAMUVG000000000	SAMEA111498617	uncultured Erysipelotrichaceae bacterium
GCA_947164555.1	CAMUWU000000000	SAMEA111498642	uncultured Gammaproteobacteria bacterium
GCA_947164605.1	CAMUXE000000000	SAMEA111498641	uncultured Lachnospiraceae bacterium
GCA_947164715.1	CAMUXM000000000	SAMEA111498629	uncultured Lachnospiraceae bacterium
GCA_947164475.1	CAMUWX000000000	SAMEA111498664	uncultured Lachnospiraceae bacterium
GCA_947163925.1	CAMUVF000000000	SAMEA111498623	uncultured Lachnospiraceae bacterium
GCA_947164085.1	CAMUVO000000000	SAMEA111498622	uncultured Lachnospiraceae bacterium
GCA_947164185.1	CAMUVY000000000	SAMEA111498643	uncultured Lachnospiraceae bacterium
GCA_947164365.1	CAMUWN000000000	SAMEA111498644	uncultured Lachnospiraceae bacterium
GCA_947164585.1	CAMUXF000000000	SAMEA111498661	uncultured Lachnospiraceae bacterium
GCA_947164285.1	CAMUWB000000000	SAMEA111498637	uncultured Negativicutes bacterium
GCA_947164615.1	CAMUXB000000000	SAMEA111498652	uncultured Olsenella sp.
GCA_947164685.1	CAMUXN000000000	SAMEA111498668	uncultured Porphyromonadaceae bacterium
GCA_947163895.1	CAMUVD000000000	SAMEA111498662	uncultured Prevotella sp.
GCA_947164705.1	CAMUXJ000000000	SAMEA111498606	uncultured Prevotella sp.
GCA_947164165.1	CAMUVT000000000	SAMEA111498659	uncultured Prevotella sp.
GCA_947164175.1	CAMUWD000000000	SAMEA111498613	uncultured Prevotella sp.
GCA_947164645.1	CAMUXP000000000	SAMEA111498610	uncultured Prevotella sp.
GCA_947164545.1	CAMUXC000000000	SAMEA111498620	uncultured Prevotella sp.
GCA_947164485.1	CAMUWP000000000	SAMEA111498628	uncultured Prevotella sp.
GCA_947164215.1	CAMUVX000000000	SAMEA111498640	uncultured Prevotella sp.
GCA_947164725.1	CAMUXO000000000	SAMEA111498614	uncultured Prevotella sp.
GCA_947163865.1	CAMUVB000000000	SAMEA111498650	uncultured Prevotella sp.
GCA_947163875.1	CAMUVA000000000	SAMEA111498651	uncultured Prevotella sp.
GCA_947163985.1	CAMUVE000000000	SAMEA111498609	uncultured Prevotella sp.
GCA_947164735.1	CAMUXU000000000	SAMEA111498626	uncultured Prevotella sp.
GCA_947164445.1	CAMUWW000000000	SAMEA111498665	uncultured Prevotella sp.
GCA_947163885.1	CAMUVC000000000	SAMEA111498656	uncultured Prevotella sp.
GCA_947164275.1	CAMUWI000000000	SAMEA111498635	uncultured Prevotella sp.
GCA_947164295.1	CAMUWH000000000	SAMEA111498615	uncultured Prevotella sp.
GCA_947164635.1	CAMUXL000000000	SAMEA111498616	uncultured Prevotella sp.
GCA_947164245.1	CAMUWA000000000	SAMEA111498675	uncultured Prevotella sp.
GCA_947164045.1	CAMUVJ000000000	SAMEA111498647	uncultured Prevotella sp.
GCA_947164255.1	CAMUWC000000000	SAMEA111498649	uncultured Prevotellaceae bacterium
GCA_947164405.1	CAMUWV000000000	SAMEA111498645	uncultured Prevotellaceae bacterium
GCA_947164235.1	CAMUVW000000000	SAMEA111498658	uncultured Prevotellaceae bacterium
GCA_947164525.1	CAMUXD000000000	SAMEA111498624	uncultured Prevotellaceae bacterium
GCA_947163915.1	CAMUVI000000000	SAMEA111498611	uncultured Prevotellaceae bacterium
GCA_947164415.1	CAMUWT000000000	SAMEA111498666	uncultured Prevotellaceae bacterium
GCA_947164205.1	CAMUVV000000000	SAMEA111498627	uncultured Prevotellaceae bacterium
GCA_947163995.1	CAMUVR000000000	SAMEA111498670	uncultured Prevotellaceae bacterium
GCA_947164385.1	CAMUWM000000000	SAMEA111498654	uncultured Roseburia sp.
GCA_947164345.1	CAMUWF000000000	SAMEA111498634	uncultured Selenomonas sp.
GCA_947163975.1	CAMUVN000000000	SAMEA111498618	uncultured Treponema sp.
GCA_947164575.1	CAMUWY000000000	SAMEA111498636	uncultured Treponema sp.
GCA_947164535.1	CAMUWS000000000	SAMEA111498605	uncultured Treponema sp.
GCA_947164015.1	CAMUVK000000000	SAMEA111498655	uncultured Treponema sp.
GCA_947164195.1	CAMUVU000000000	SAMEA111498625	uncultured bacterium
GCA_947163945.1	CAMUVH000000000	SAMEA111498671	uncultured bacterium
GCA_947164695.1	CAMUXI000000000	SAMEA111498619	uncultured cyanobacterium

BioProject

Result Filters

Display Settings:

Send to:

EMG produced TPA metagenomics assembly of PRJNA635543 data set (Microbial Community of Sheep Rumen).

Supplemental Content

Related information

Recent activity