ID 894476 - BioProject

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Accession: PRJNA894476 ID: 894476

Whole genome sequencing of selected environmental microbiota from tree fruit packing houses

We isolated and whole genome sequenced selected environmental microbiota of tree fruit packing facitilies to determine their identity, and their effect in biofilm formation and sanitizer tolerance when in the presence of L. monocytogenes

Accession	PRJNA894476
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 26-Oct-2022 Penn State University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	56
SRA Experiments	59
Other datasets
BioSample	59
Assembly	56

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

56
56

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_030011855.1	JASCYC000000000	SAMN31456473	PS02296	Curtobacterium flaccumfaciens
GCA_029960045.1	JASCOV000000000	SAMN31456470	PS02293	Flavobacteriaceae bacterium PS02293
GCA_029959295.1	JASCOH000000000	SAMN31456485	PS02334	Flavobacteriaceae bacterium PS02334
GCA_029960065.1	JASCOF000000000	SAMN31456487	PS02336	Flavobacteriaceae bacterium PS02336
GCA_029959285.1	JASCOE000000000	SAMN31456488	PS02337	Flavobacteriaceae bacterium PS02337
GCA_029959615.1	JASCOD000000000	SAMN31456489	PS02338	Flavobacteriaceae bacterium PS02338
GCA_030011715.1	JASCYH000000000	SAMN31456451	PS01859	Gulosibacter sediminis
GCA_030011755.1	JASCYE000000000	SAMN31456461	PS02074	Gulosibacter sediminis
GCA_029959555.1	JASCPI000000000	SAMN31456452	PS02065	Lysobacteraceae bacterium PS02065
GCA_029959795.1	JASCOL000000000	SAMN31456481	PS02304	Lysobacteraceae bacterium PS02304
GCA_029959605.1	JASCOC000000000	SAMN31456491	PS02340	Lysobacteraceae bacterium PS02340
GCA_029960165.1	JASCPS000000000	SAMN31456439	PS01271	Microbacteriaceae bacterium PS01271
GCA_029959545.1	JASCPH000000000	SAMN31456453	PS02066	Microbacteriaceae bacterium PS02066
GCA_029960085.1	JASCPG000000000	SAMN31456454	PS02067	Microbacteriaceae bacterium PS02067
GCA_029959325.1	JASCPF000000000	SAMN31456455	PS02068	Microbacteriaceae bacterium PS02068
GCA_029959865.1	JASCPE000000000	SAMN31456457	PS02070	Microbacteriaceae bacterium PS02070
GCA_029959845.1	JASCPD000000000	SAMN31456458	PS02071	Microbacteriaceae bacterium PS02071
GCA_029959965.1	JASCOX000000000	SAMN31456468	PS02291	Microbacteriaceae bacterium PS02291
GCA_029960005.1	JASCOW000000000	SAMN31456469	PS02292	Microbacteriaceae bacterium PS02292
GCA_029959985.1	JASCOU000000000	SAMN31456471	PS02294	Microbacteriaceae bacterium PS02294
GCA_029959955.1	JASCOT000000000	SAMN31456472	PS02295	Microbacteriaceae bacterium PS02295
GCA_029959675.1	JASCOK000000000	SAMN31456482	PS02331	Microbacteriaceae bacterium PS02331
GCA_029959645.1	JASCOJ000000000	SAMN31456483	PS02332	Microbacteriaceae bacterium PS02332
GCA_029959665.1	JASCOI000000000	SAMN31456484	PS02333	Microbacteriaceae bacterium PS02333
GCA_029959855.1	JASCOG000000000	SAMN31456486	PS02335	Microbacteriaceae bacterium PS02335
GCA_029959945.1	JASCOB000000000	SAMN31456492	PS02341	Microbacteriaceae bacterium PS02341
GCA_029959365.1	JASCOA000000000	SAMN31456494	PS02343	Microbacteriaceae bacterium PS02343
GCA_029959905.1	JASCNZ000000000	SAMN31456495	PS02344	Microbacteriaceae bacterium PS02344
GCA_030011835.1	JASCYG000000000	SAMN31456456	PS02069	Microbacterium flavum
GCA_030011865.1	JASCYF000000000	SAMN31456459	PS02072	Microbacterium oxydans
GCA_030011795.1	JASCYD000000000	SAMN31456464	PS02287	Microbacterium oxydans
GCA_030011895.1	JASCYA000000000	SAMN31456496	PS02345	Microbacterium oxydans
GCA_030011915.1	JASCYB000000000	SAMN31456490	PS02339	Pseudoclavibacter helvolus
GCA_030011815.1	JASCYI000000000	SAMN31456449	PS01857	Pseudomonas paracarnis
GCA_029959775.1	JASCPT000000000	SAMN31456438	PS01270	Pseudomonas sp. PS01270
GCA_029959765.1	JASCPR000000000	SAMN31456440	PS01296	Pseudomonas sp. PS01296
GCA_029959305.1	JASCPQ000000000	SAMN31456441	PS01297	Pseudomonas sp. PS01297
GCA_029959745.1	JASCPP000000000	SAMN31456442	PS01298	Pseudomonas sp. PS01298
GCA_029960145.1	JASCPO000000000	SAMN31456443	PS01299	Pseudomonas sp. PS01299
GCA_029960155.1	JASCPN000000000	SAMN31456444	PS01300	Pseudomonas sp. PS01300
GCA_029960215.1	JASCPM000000000	SAMN31456445	PS01301	Pseudomonas sp. PS01301
GCA_029959405.1	JASCPL000000000	SAMN31456446	PS01302	Pseudomonas sp. PS01302
GCA_029959385.1	JASCPK000000000	SAMN31456447	PS01303	Pseudomonas sp. PS01303
GCA_029959505.1	JASCPJ000000000	SAMN31456448	PS01856	Pseudomonas sp. PS01856
GCA_029959515.1	JASCPC000000000	SAMN31456462	PS02285	Pseudomonas sp. PS02285
GCA_029959825.1	JASCPB000000000	SAMN31456463	PS02286	Pseudomonas sp. PS02286
GCA_029959715.1	JASCPA000000000	SAMN31456465	PS02288	Pseudomonas sp. PS02288
GCA_029960075.1	JASCOY000000000	SAMN31456467	PS02290	Pseudomonas sp. PS02290
GCA_029959585.1	JASCON000000000	SAMN31456479	PS02302	Pseudomonas sp. PS02302
GCA_029959925.1	JASCOM000000000	SAMN31456480	PS02303	Pseudomonas sp. PS02303
GCA_029960115.1	JASCOZ000000000	SAMN31456466	PS02289	Stenotrophomonas sp. PS02289
GCA_029959705.1	JASCOS000000000	SAMN31456474	PS02297	Stenotrophomonas sp. PS02297
GCA_029959445.1	JASCOR000000000	SAMN31456475	PS02298	Stenotrophomonas sp. PS02298
GCA_029959465.1	JASCOQ000000000	SAMN31456476	PS02299	Stenotrophomonas sp. PS02299
GCA_029959395.1	JASCOP000000000	SAMN31456477	PS02300	Stenotrophomonas sp. PS02300
GCA_029959485.1	JASCOO000000000	SAMN31456478	PS02301	Stenotrophomonas sp. PS02301

SRA Data Details

Parameter	Value
Data volume, Gbases	53
Data volume, Mbytes	23660

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Whole genome sequencing of selected environmental microbiota from tree fruit packing houses

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