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Accession: PRJNA937293 ID: 937293

Pseudomonas putida KT2440

Pseudomonas putida KT2440 Genome sequencing and assembly

See Genome Information for Pseudomonas putida
To identify mutations that restore growth on para-coumarate in a growth coupled strain predicted to produce high yields of glutamine and indigoidine.
AccessionPRJNA937293
Data TypeGenome sequencing and assembly, Raw sequence reads, Assembly
ScopeMultiisolate
OrganismPseudomonas putida KT2440[Taxonomy ID: 160488]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida; Pseudomonas putida KT2440
PublicationsEng T et al., "Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering.", Cell Rep, 2023 Sep 26;42(9):113087
Grants
  • "BioEnergy Research Center, the Joint BioEnergy Institute" (Grant ID DE-AC02-05CH11231, Department of Energy, Office of Science, Office of Biological and Environmental Research)
SubmissionRegistration date: 21-Feb-2023
Lawrence Berkeley National Laboratory
Related Resources
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)4
Publications
PubMed1
Other datasets
BioSample4
Assembly4
Assembly details:
Assembly levelNumber of Assemblies
4
4
AssemblyLevelChrsBioSampleStrainTaxonomy
GCA_045571385.1Complete genomeSAMN33347510
KT2440 Design 1b post-ALE
GCA_045571375.1Complete genomeSAMN33347507
KT2440
GCA_045571355.1Complete genomeSAMN33347509
KT2440 Design 1a post-ALE
GCA_045571365.1Complete genomeSAMN33347508
KT2440 PP_1378 PP_1755PP_0944 pre-ALE 3
SRA Data Details
ParameterValue
Data volume, Gbases5
Data volume, Mbytes2566

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